Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is 38234737

Identifier: 38234737

GI number: 38234737

Start: 2281244

End: 2282221

Strand: Reverse

Name: 38234737

Synonym: DIP2196

Alternate gene names: NA

Gene position: 2282221-2281244 (Counterclockwise)

Preceding gene: 38234738

Following gene: 38234736

Centisome position: 91.71

GC content: 57.87

Gene sequence:

>978_bases
ATGAGCAAGAACCAAGGCTTTATCGAGCCGGAGCCACACACCCGCGGCGTTGAGCTAGACAAGAAGCGGCAACCGCCTAA
AAACCTTGTCGACGGCATGATCAAAGCGCTGCGCCCGAAGCAATGGGTGAAAAACGTTCTGGTTCTTGCTGCCCCAGCTG
CCGCAGGTGCCGACGCCCTGCTGAGCACCCGCACCCTGTTCGACATCCTCATCGCCTTTGTGGCGTTTTGTATGTCTGCC
TCCGCGATCTACCTGATCAACGATGCCCGCGACGTAGAAGCTGACCGCGCACACCCCACCAAGCGCTTCCGACCCATCGC
GGCCGGCGTGCTCCCGGTGGGCTTGGCCTACATCATGGCCGTGGTCCTTATCATCGCCGCGGTTGCGATCAGCTACACCG
CATCGTCTGGCCACGGCTTGGCTATCGTGGTTGCTGTTTACATTGCACTGCAGCTGGGCTACTGCTTCGGCTGGAAGCAC
CAGCCGGTGATCGACATCGCGCTGGTGTCCTCTGGATTCATGCTGCGTGCGATGGCCGGCGGTGTTGCTGCCGGAATCGA
CCTATCCCAGTGGTTCTTGCTGGTCGCAGCATTCGGTTCGCTATTTATGGCCTCGGGTAAGCGCTACGCAGAGATTTTGC
TCACGCAAAAATCTGGTGCGAAGATCCGCAAGTCCCTTGAGGGTTATACCCCTACCTACCTGCGCTTTGTGTGGACACTT
TCCGCCACCGCAGTGGTCATAGCTTACTCTCTGTGGGGCTTTGAAATGGCCAAAGCTGCAAGTGGTACTGCCTCCGTGTG
GTACCAGGTTTCTATGGTTCCTTTCACTGTGGCAATCTTGCGTTATGCGGCAGACGTTGACCGTGGTGAAGGCGGTGCGC
CTGATGAGATCGCATTGTCGGACCGTCCGCTGCAGTTCTTGGCCTTGGGCTGGGTTATCTGTATCGGTATCGCTGTCTAC
CTAGTTCCGGCTCTATAA

Upstream 100 bases:

>100_bases
CGCGTATGGTTCTCGGAGTACATTATCCGACCGACGTGGCCACCGGCGCTCTCGTAGGTGCGGTCACTGCAGAAGCAATT
GCACGAACTGGGAAGGTGAA

Downstream 100 bases:

>100_bases
GGAGAAAAATGCAGAAAGCACCCCAGAATAGGTATGTTGAATACTTTCCTATTGCGCTTGGTGTAGGTGCCATCGGAATT
TTCATGTTCTGGGGAGGCTG

Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSKNQGFIEPEPHTRGVELDKKRQPPKNLVDGMIKALRPKQWVKNVLVLAAPAAAGADALLSTRTLFDILIAFVAFCMSA
SAIYLINDARDVEADRAHPTKRFRPIAAGVLPVGLAYIMAVVLIIAAVAISYTASSGHGLAIVVAVYIALQLGYCFGWKH
QPVIDIALVSSGFMLRAMAGGVAAGIDLSQWFLLVAAFGSLFMASGKRYAEILLTQKSGAKIRKSLEGYTPTYLRFVWTL
SATAVVIAYSLWGFEMAKAASGTASVWYQVSMVPFTVAILRYAADVDRGEGGAPDEIALSDRPLQFLALGWVICIGIAVY
LVPAL

Sequences:

>Translated_325_residues
MSKNQGFIEPEPHTRGVELDKKRQPPKNLVDGMIKALRPKQWVKNVLVLAAPAAAGADALLSTRTLFDILIAFVAFCMSA
SAIYLINDARDVEADRAHPTKRFRPIAAGVLPVGLAYIMAVVLIIAAVAISYTASSGHGLAIVVAVYIALQLGYCFGWKH
QPVIDIALVSSGFMLRAMAGGVAAGIDLSQWFLLVAAFGSLFMASGKRYAEILLTQKSGAKIRKSLEGYTPTYLRFVWTL
SATAVVIAYSLWGFEMAKAASGTASVWYQVSMVPFTVAILRYAADVDRGEGGAPDEIALSDRPLQFLALGWVICIGIAVY
LVPAL
>Mature_324_residues
SKNQGFIEPEPHTRGVELDKKRQPPKNLVDGMIKALRPKQWVKNVLVLAAPAAAGADALLSTRTLFDILIAFVAFCMSAS
AIYLINDARDVEADRAHPTKRFRPIAAGVLPVGLAYIMAVVLIIAAVAISYTASSGHGLAIVVAVYIALQLGYCFGWKHQ
PVIDIALVSSGFMLRAMAGGVAAGIDLSQWFLLVAAFGSLFMASGKRYAEILLTQKSGAKIRKSLEGYTPTYLRFVWTLS
ATAVVIAYSLWGFEMAKAASGTASVWYQVSMVPFTVAILRYAADVDRGEGGAPDEIALSDRPLQFLALGWVICIGIAVYL
VPAL

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 34897; Mature: 34766

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNQGFIEPEPHTRGVELDKKRQPPKNLVDGMIKALRPKQWVKNVLVLAAPAAAGADAL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHH
LSTRTLFDILIAFVAFCMSASAIYLINDARDVEADRAHPTKRFRPIAAGVLPVGLAYIMA
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VVLIIAAVAISYTASSGHGLAIVVAVYIALQLGYCFGWKHQPVIDIALVSSGFMLRAMAG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHC
GVAAGIDLSQWFLLVAAFGSLFMASGKRYAEILLTQKSGAKIRKSLEGYTPTYLRFVWTL
CHHHCCCHHHHHHHHHHHHHHHHHCCCCEEHEEEECCCCHHHHHHHCCCCHHHHHHHHHH
SATAVVIAYSLWGFEMAKAASGTASVWYQVSMVPFTVAILRYAADVDRGEGGAPDEIALS
HHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEC
DRPLQFLALGWVICIGIAVYLVPAL
CCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKNQGFIEPEPHTRGVELDKKRQPPKNLVDGMIKALRPKQWVKNVLVLAAPAAAGADAL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHH
LSTRTLFDILIAFVAFCMSASAIYLINDARDVEADRAHPTKRFRPIAAGVLPVGLAYIMA
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VVLIIAAVAISYTASSGHGLAIVVAVYIALQLGYCFGWKHQPVIDIALVSSGFMLRAMAG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHC
GVAAGIDLSQWFLLVAAFGSLFMASGKRYAEILLTQKSGAKIRKSLEGYTPTYLRFVWTL
CHHHCCCHHHHHHHHHHHHHHHHHCCCCEEHEEEECCCCHHHHHHHCCCCHHHHHHHHHH
SATAVVIAYSLWGFEMAKAASGTASVWYQVSMVPFTVAILRYAADVDRGEGGAPDEIALS
HHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEC
DRPLQFLALGWVICIGIAVYLVPAL
CCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]