Click here to switch to the map view.

The map label for this gene is 38234736

Identifier: 38234736

GI number: 38234736

Start: 2279547

End: 2281235

Strand: Reverse

Name: 38234736

Synonym: DIP2195

Alternate gene names: NA

Gene position: 2281235-2279547 (Counterclockwise)

Preceding gene: 38234737

Following gene: 38234735

Centisome position: 91.67

GC content: 46.83

Gene sequence:

>1689_bases
ATGCAGAAAGCACCCCAGAATAGGTATGTTGAATACTTTCCTATTGCGCTTGGTGTAGGTGCCATCGGAATTTTCATGTT
CTGGGGAGGCTGGACTCGGCGGTGGATGAGCGACGATGGCCTTATCGTGTTGCGCACCGTTCGTAATCTACTTGCGGGCA
ATGGGCCAGTATTTAACGTTGGCGAAAGAGTAGAAGCTAATACATCGACGATCTGGCAATACGTTATTTACATTGGTGCA
CGAATAACAGGTGCAGACCTCCATCGAATCTCAATAGGGAGCTCGCTGTTTTTCAGCGTATTAGCCCTTATGATCGCGGT
ATTTGCCACCTCGATGTACTACAAAAAGCGCGGTTTTAATTTTGTTGTGCCTTTTGGTGCATTAATTTACGTGGCTCTAC
CTCCAGCACGAGATTTTGCGACTTCCGGGTTAGAGTGGGGACTCTCCATTTTCTACCTAGCTACTTTTTGGTGGCTGAGT
GGTACACAACGGAAATATCTTTTCGCGTTGTGGTTAGGAATCGGTTGGCTTGTCCGTCCCGAAATGCTTTTATACTCTGT
CATCTTCGGTGCGTGGCTATTTTGGAAAACCCGTGATTGGCGTATTTTTGCAGCCGCTCTGCCATTGCCGGTTGGATATG
AAATTTTCCGCATGGGATATTACGGTTTGGTTGTTCCGCATACCGCTGTTGCTAAATCGGCAAGTTCGAGTGACTGGGCC
GGAGGGCTGTCATATTTATGGGACTTCGTCGGAACCTATGCGCTGTACCTACTCATTCCAGTAGTAATCATTGCTCTTAT
CGCTTGCAAGCTTGACTCTGTTGCGATCTTGATGATGCTTGCAGGAACGTTGCATGTTTTCTATGTGATTAAAGTAGGCG
GCGATTTTATGCATGGCCGTATGCTGTTATTACCGCTTTTTGCGCTCCTCTTGCCGTTGATGGCAATCCCAATTCAGCCA
TCAACGCTCTGGAGAAATGGTTTAGCAACCATTGCAATTGCGGTGTGGGCAATAGTGACTGTAATACATGGACACGCCTA
TGAACGGCCTCAAGGAGCCGCAGCCCAAGCTGCTTTAAAAATTGTTGACGAACGAGAATATTGGACTCAGACGCTGCAAC
GCGACATAGCCCCACGAAATGCTAGGGATTTTCTCACTGCCCCTGCAATGCGAGATTTCCAAAGCACTATTAAGGCAGGT
CAAGAAAATAACAGCGCTTATTTATTTAACTATGTAATTGATAGTGAACGTGACCTGCTATCTTGGGGTATCATTCCTCG
GGAAGCTCGCAACGATAGATATCCTTTGTCTCTCATGCATCTTAATCTTGGTATGACGAGTATGAATGCTGGATTAGACG
TTCGAGTGCATGACTCTGTGGGATTAAGTACACCTTTAGCTGCAAGGCAACCCAAGATTGAGGACGGTCGAATTGGCCAT
AATAAGCATCTTCCTCTGGAATGGGAACTGGCTGATTCTAGCGCAGACCCTTCTTCCTTGCCTCCGGGGGTTGATCGTGA
AGAAGTTGAACGCATTAGGGCGATGCTTGCGCACGGAGATGCAGCCGAATTGCTAGCAAGTTACAGAGAGCCGATGAGCA
TTCAGCGTTTTTTCAAAAACATTAAATTTTCTCTGACCACTGGTTTGACACTGCAATTCGACAAATTTGGCGAAACAGTG
ACCCGTTAG

Upstream 100 bases:

>100_bases
AGATCGCATTGTCGGACCGTCCGCTGCAGTTCTTGGCCTTGGGCTGGGTTATCTGTATCGGTATCGCTGTCTACCTAGTT
CCGGCTCTATAAGGAGAAAA

Downstream 100 bases:

>100_bases
TACACACAATTCTTTATAAAGAATTGGCTTGAGTAAATGCTGGGTTCTGAAAAATTTAATGTACTTATATGCTAGTTTAA
TTAAGGTTTGTCTCGAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Arabinosyltransferase AftB; Signal Peptide; Integral Membrane Protein

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MQKAPQNRYVEYFPIALGVGAIGIFMFWGGWTRRWMSDDGLIVLRTVRNLLAGNGPVFNVGERVEANTSTIWQYVIYIGA
RITGADLHRISIGSSLFFSVLALMIAVFATSMYYKKRGFNFVVPFGALIYVALPPARDFATSGLEWGLSIFYLATFWWLS
GTQRKYLFALWLGIGWLVRPEMLLYSVIFGAWLFWKTRDWRIFAAALPLPVGYEIFRMGYYGLVVPHTAVAKSASSSDWA
GGLSYLWDFVGTYALYLLIPVVIIALIACKLDSVAILMMLAGTLHVFYVIKVGGDFMHGRMLLLPLFALLLPLMAIPIQP
STLWRNGLATIAIAVWAIVTVIHGHAYERPQGAAAQAALKIVDEREYWTQTLQRDIAPRNARDFLTAPAMRDFQSTIKAG
QENNSAYLFNYVIDSERDLLSWGIIPREARNDRYPLSLMHLNLGMTSMNAGLDVRVHDSVGLSTPLAARQPKIEDGRIGH
NKHLPLEWELADSSADPSSLPPGVDREEVERIRAMLAHGDAAELLASYREPMSIQRFFKNIKFSLTTGLTLQFDKFGETV
TR

Sequences:

>Translated_562_residues
MQKAPQNRYVEYFPIALGVGAIGIFMFWGGWTRRWMSDDGLIVLRTVRNLLAGNGPVFNVGERVEANTSTIWQYVIYIGA
RITGADLHRISIGSSLFFSVLALMIAVFATSMYYKKRGFNFVVPFGALIYVALPPARDFATSGLEWGLSIFYLATFWWLS
GTQRKYLFALWLGIGWLVRPEMLLYSVIFGAWLFWKTRDWRIFAAALPLPVGYEIFRMGYYGLVVPHTAVAKSASSSDWA
GGLSYLWDFVGTYALYLLIPVVIIALIACKLDSVAILMMLAGTLHVFYVIKVGGDFMHGRMLLLPLFALLLPLMAIPIQP
STLWRNGLATIAIAVWAIVTVIHGHAYERPQGAAAQAALKIVDEREYWTQTLQRDIAPRNARDFLTAPAMRDFQSTIKAG
QENNSAYLFNYVIDSERDLLSWGIIPREARNDRYPLSLMHLNLGMTSMNAGLDVRVHDSVGLSTPLAARQPKIEDGRIGH
NKHLPLEWELADSSADPSSLPPGVDREEVERIRAMLAHGDAAELLASYREPMSIQRFFKNIKFSLTTGLTLQFDKFGETV
TR
>Mature_562_residues
MQKAPQNRYVEYFPIALGVGAIGIFMFWGGWTRRWMSDDGLIVLRTVRNLLAGNGPVFNVGERVEANTSTIWQYVIYIGA
RITGADLHRISIGSSLFFSVLALMIAVFATSMYYKKRGFNFVVPFGALIYVALPPARDFATSGLEWGLSIFYLATFWWLS
GTQRKYLFALWLGIGWLVRPEMLLYSVIFGAWLFWKTRDWRIFAAALPLPVGYEIFRMGYYGLVVPHTAVAKSASSSDWA
GGLSYLWDFVGTYALYLLIPVVIIALIACKLDSVAILMMLAGTLHVFYVIKVGGDFMHGRMLLLPLFALLLPLMAIPIQP
STLWRNGLATIAIAVWAIVTVIHGHAYERPQGAAAQAALKIVDEREYWTQTLQRDIAPRNARDFLTAPAMRDFQSTIKAG
QENNSAYLFNYVIDSERDLLSWGIIPREARNDRYPLSLMHLNLGMTSMNAGLDVRVHDSVGLSTPLAARQPKIEDGRIGH
NKHLPLEWELADSSADPSSLPPGVDREEVERIRAMLAHGDAAELLASYREPMSIQRFFKNIKFSLTTGLTLQFDKFGETV
TR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63084; Mature: 63084

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKAPQNRYVEYFPIALGVGAIGIFMFWGGWTRRWMSDDGLIVLRTVRNLLAGNGPVFNV
CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHHHHHHHCCCCCEECC
GERVEANTSTIWQYVIYIGARITGADLHRISIGSSLFFSVLALMIAVFATSMYYKKRGFN
CCCCCCCHHHHHHHHHHHCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCE
FVVPFGALIYVALPPARDFATSGLEWGLSIFYLATFWWLSGTQRKYLFALWLGIGWLVRP
EEECCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EMLLYSVIFGAWLFWKTRDWRIFAAALPLPVGYEIFRMGYYGLVVPHTAVAKSASSSDWA
HHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHCCCCEEECCCHHHHCCCCCCCCC
GGLSYLWDFVGTYALYLLIPVVIIALIACKLDSVAILMMLAGTLHVFYVIKVGGDFMHGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHH
MLLLPLFALLLPLMAIPIQPSTLWRNGLATIAIAVWAIVTVIHGHAYERPQGAAAQAALK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
IVDEREYWTQTLQRDIAPRNARDFLTAPAMRDFQSTIKAGQENNSAYLFNYVIDSERDLL
HHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHH
SWGIIPREARNDRYPLSLMHLNLGMTSMNAGLDVRVHDSVGLSTPLAARQPKIEDGRIGH
HHCCCCCCCCCCCCCEEEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
NKHLPLEWELADSSADPSSLPPGVDREEVERIRAMLAHGDAAELLASYREPMSIQRFFKN
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
IKFSLTTGLTLQFDKFGETVTR
CCEEEEECCEEEEHHHCHHHCC
>Mature Secondary Structure
MQKAPQNRYVEYFPIALGVGAIGIFMFWGGWTRRWMSDDGLIVLRTVRNLLAGNGPVFNV
CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHHHHHHHCCCCCEECC
GERVEANTSTIWQYVIYIGARITGADLHRISIGSSLFFSVLALMIAVFATSMYYKKRGFN
CCCCCCCHHHHHHHHHHHCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCE
FVVPFGALIYVALPPARDFATSGLEWGLSIFYLATFWWLSGTQRKYLFALWLGIGWLVRP
EEECCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EMLLYSVIFGAWLFWKTRDWRIFAAALPLPVGYEIFRMGYYGLVVPHTAVAKSASSSDWA
HHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHCCCCEEECCCHHHHCCCCCCCCC
GGLSYLWDFVGTYALYLLIPVVIIALIACKLDSVAILMMLAGTLHVFYVIKVGGDFMHGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHH
MLLLPLFALLLPLMAIPIQPSTLWRNGLATIAIAVWAIVTVIHGHAYERPQGAAAQAALK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
IVDEREYWTQTLQRDIAPRNARDFLTAPAMRDFQSTIKAGQENNSAYLFNYVIDSERDLL
HHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHH
SWGIIPREARNDRYPLSLMHLNLGMTSMNAGLDVRVHDSVGLSTPLAARQPKIEDGRIGH
HHCCCCCCCCCCCCCEEEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
NKHLPLEWELADSSADPSSLPPGVDREEVERIRAMLAHGDAAELLASYREPMSIQRFFKN
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
IKFSLTTGLTLQFDKFGETVTR
CCEEEEECCEEEEHHHCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA