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The map label for this gene is 38234449

Identifier: 38234449

GI number: 38234449

Start: 1922840

End: 1923505

Strand: Direct

Name: 38234449

Synonym: DIP1879

Alternate gene names: NA

Gene position: 1922840-1923505 (Clockwise)

Preceding gene: 38234443

Following gene: 38234453

Centisome position: 77.26

GC content: 55.26

Gene sequence:

>666_bases
ATGAGTGAGAAAACTATGGGACCACGGCAGTCTCGCCCGGGAATCCTCACACCAGCACAAGAACGAGTAGCCCAAGCAAT
CGCACGCCTAGGGCCAGAAATATCGCTGACAGACATTTCCCGCATGGTTGGCGGCCACCCCAACGCTTCTCGCCAACACA
TCAAAACTCTGGAGAACTCAGGCTATATTTCAGCGACTCAAAAACGTGGCGCCGCAGGACGCCCAGCACAGCTCTATTCC
ATCACCCCCGAGGGACTTCGGGCTCTCGCAGGCAACGCCACACTCATTGCACACACCTCTTTTGTCCGATCTCTAAGTCA
CTACATTGCCAATCAACCGCACCCCGAAGAACGCGCTCTTGCGCTCGGCAGTCAAATGGTCCGTGACGAAGGCCCCCTCC
CCGGCGCGACCAAAGTCGACAAAGTGGTCAATCTCCTAGAAAAATATGGGTTCGCCCCCACCCAAGCAGGAACAGAAATC
CAGTTACTCACCTGCCCAGTGCTCGACTCCGCCGTTCGCCATCCCGAAGTCGTTTGCACAATGCATAGAGGGATCTTGAA
CGAAATAACTGGTAACAACACCACTTTCATACTCGAGCCCTTCGCTCGACCCGGCATGTGCGTGATTAGAACCGTATCCC
CCACAGCAAACCCCACCCAGACATAA

Upstream 100 bases:

>100_bases
CACTGACACAAGCCCCCTTCCAGCACGGTGGTAAATGTGGCAACATTGGCGATCAGCCATATTTTACATATGATATGTAA
AAAAGAAAAAGGAGTGATTC

Downstream 100 bases:

>100_bases
AAATATCCCCTCACCTGCTGTTTTGGTGAGGGGTTGTCGGTGGAGCTAACGGGATTCGAACCCGTGACCCCCACACTGCC
AGTGTGATGCGCTACCAGCT

Product: putative DNA-biding protein

Products: NA

Alternate protein names: DNA-Biding Protein; Regulatory Protein; Regulatory Protein IclR; Transcriptional Regulator TrmB

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSEKTMGPRQSRPGILTPAQERVAQAIARLGPEISLTDISRMVGGHPNASRQHIKTLENSGYISATQKRGAAGRPAQLYS
ITPEGLRALAGNATLIAHTSFVRSLSHYIANQPHPEERALALGSQMVRDEGPLPGATKVDKVVNLLEKYGFAPTQAGTEI
QLLTCPVLDSAVRHPEVVCTMHRGILNEITGNNTTFILEPFARPGMCVIRTVSPTANPTQT

Sequences:

>Translated_221_residues
MSEKTMGPRQSRPGILTPAQERVAQAIARLGPEISLTDISRMVGGHPNASRQHIKTLENSGYISATQKRGAAGRPAQLYS
ITPEGLRALAGNATLIAHTSFVRSLSHYIANQPHPEERALALGSQMVRDEGPLPGATKVDKVVNLLEKYGFAPTQAGTEI
QLLTCPVLDSAVRHPEVVCTMHRGILNEITGNNTTFILEPFARPGMCVIRTVSPTANPTQT
>Mature_220_residues
SEKTMGPRQSRPGILTPAQERVAQAIARLGPEISLTDISRMVGGHPNASRQHIKTLENSGYISATQKRGAAGRPAQLYSI
TPEGLRALAGNATLIAHTSFVRSLSHYIANQPHPEERALALGSQMVRDEGPLPGATKVDKVVNLLEKYGFAPTQAGTEIQ
LLTCPVLDSAVRHPEVVCTMHRGILNEITGNNTTFILEPFARPGMCVIRTVSPTANPTQT

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23763; Mature: 23631

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKTMGPRQSRPGILTPAQERVAQAIARLGPEISLTDISRMVGGHPNASRQHIKTLENS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCC
GYISATQKRGAAGRPAQLYSITPEGLRALAGNATLIAHTSFVRSLSHYIANQPHPEERAL
CCEEEHHHCCCCCCCCEEEEECHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHH
ALGSQMVRDEGPLPGATKVDKVVNLLEKYGFAPTQAGTEIQLLTCPVLDSAVRHPEVVCT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHCCCHHHHH
MHRGILNEITGNNTTFILEPFARPGMCVIRTVSPTANPTQT
HHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SEKTMGPRQSRPGILTPAQERVAQAIARLGPEISLTDISRMVGGHPNASRQHIKTLENS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCC
GYISATQKRGAAGRPAQLYSITPEGLRALAGNATLIAHTSFVRSLSHYIANQPHPEERAL
CCEEEHHHCCCCCCCCEEEEECHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHH
ALGSQMVRDEGPLPGATKVDKVVNLLEKYGFAPTQAGTEIQLLTCPVLDSAVRHPEVVCT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHCCCHHHHH
MHRGILNEITGNNTTFILEPFARPGMCVIRTVSPTANPTQT
HHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA