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The map label for this gene is crtN [H]

Identifier: 38234441

GI number: 38234441

Start: 1915468

End: 1916994

Strand: Direct

Name: crtN [H]

Synonym: DIP1871

Alternate gene names: 38234441

Gene position: 1915468-1916994 (Clockwise)

Preceding gene: 38234440

Following gene: 38234443

Centisome position: 76.97

GC content: 60.58

Gene sequence:

>1527_bases
ATGGCTAAACACGCAATTGTTATTGGCGCCGGTGTTGCAGGTCTTGCCACCGCCGGACTCCTGGCACGCGAGGGCTACCA
CGTGCGCGTCTTTGAAAAACTCGACGCCCCTGGCGGCCGCGCCGGCCAACTCACCGACAGCGGTTTTCGCTGGGACACCG
GCCCCTCGTGGTATCTCATGCCCGAAGCCTATGACCACTTCTTTGAGCTCATGGGCACCACCACCGAGCAGGCCTACGAA
CTTGTCGACCTCCACCCCGCCTACCGGCTCTTCCCCGAAGGCTCACCAGCACTCGACGTGGATAGCGGCGTGGGAAACGT
CGCAACGCTTTTCGACGCCCTCCATCCCGGCGCCGGCAAAAAAGTACAACGCTACCTCCGCAACGCCACCGACGTGTACC
ACCTCTCCCTGCGACACTTCCTCTACACCACTTTTAGCAACCCCCGCGACTTCCTGCGCGCCGACATCCTTCGCCGACTC
CCCTACCTTGCGCGGCTCTTAAGCAGTTCACTTGATACGTGGGTACGCAACCGATTCCCACACCCCATCCTGCGACAAAT
ACTGAGCTACCCCGCAGTGTTCCTCTCCACCCAGCCCACACAAGCGCCCGCGCTCTACTCACTCATGAGCCACACCGACC
TTGTCGAAGGCGTACACTACCCTCGCGGCGGATTCGCCGCCATCATGTCCGCCATCGAAAAAATCGACCGCGAAGCCGGC
GTGGAGTTCTACTACGAACACGAAGTCACCGACATCACCATCGAATCCGGTCGCGCCTGCGGCATCACCGCAGCCGGCCC
CCACGGAACCTCCACCTTCAATGCCGATGTTGTCGTCTCCGCCGCAGACCTCCACCACACCGAAACTCGGCTGCTGCCAC
CCCACCTGCGCAGCTACCCCGAAAACTACTGGAGCAAACGCAACCCAGGCCTTGGAACCGTACTCATCATGCTAGGAGTG
CGCGGGCACCTACCCGAACTAGCCCACCACAATCTGCTCTTCAGCAAAGACTGGGACCCCGATTTCGCCGCCGTCTATTC
CGGGCCACACCCCTCCCGCCCACTCGGCGCATCACAATCCATCTACATCTCTAAAACCTCAGCAACCGACAGCGACGCAG
CCCCCGAAGGACACGAAAACCTCTTCATCCTCGTGCCCGTCCCCGCCAACGACGCCCTCGGCCACGGCAACACCTACCAC
CACACCGCCTCCCCAAGAGTCGAAGAAATCACCCGCGCAACAATCGCACAGATCGCCACATGGACCGGTATCAGCGACCT
CGACGAGCGCATCGTGGTCACCAAAACAATTGGGCCTGCCGACTTTTCCGAGCGCTACCACGCATGGTCTAGCGGAGCCA
TCGGACCAGCACATACCTTGATGCAATCCGCGTTCTTCCGAGGCAAAAACATGGCATCGAAAGTCAAAGGCCTCTACTAC
GCTGGCGGCACCACCGTGCCTGGTGTTGGAGTCCCCATGTGCCTGATCTCCGCAGAAAACGTGATCACTCGAATCAAAGC
GGAATAG

Upstream 100 bases:

>100_bases
ATCCAGGAGGCCTCCGCAGTCGAAGTCACACACACTCGAATCCGTATCCCCAAAGCCCAAAAAATTGCCATCATCACCCG
AGCCCCTTGGAGAGCATTAC

Downstream 100 bases:

>100_bases
GGGCCCATTGCAGAGATAACAAAAAGACCGCCACCGAAAGGTGACGGTCTTTGAAGTTATAACACGAATTAGCCCTGACG
AGCCTTGAAACGTGGGTCTT

Product: phytoene dehydrogenase related enzyme

Products: NA

Alternate protein names: 4,4'-diapophytoene desaturase; Diapophytoene desaturase [H]

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MAKHAIVIGAGVAGLATAGLLAREGYHVRVFEKLDAPGGRAGQLTDSGFRWDTGPSWYLMPEAYDHFFELMGTTTEQAYE
LVDLHPAYRLFPEGSPALDVDSGVGNVATLFDALHPGAGKKVQRYLRNATDVYHLSLRHFLYTTFSNPRDFLRADILRRL
PYLARLLSSSLDTWVRNRFPHPILRQILSYPAVFLSTQPTQAPALYSLMSHTDLVEGVHYPRGGFAAIMSAIEKIDREAG
VEFYYEHEVTDITIESGRACGITAAGPHGTSTFNADVVVSAADLHHTETRLLPPHLRSYPENYWSKRNPGLGTVLIMLGV
RGHLPELAHHNLLFSKDWDPDFAAVYSGPHPSRPLGASQSIYISKTSATDSDAAPEGHENLFILVPVPANDALGHGNTYH
HTASPRVEEITRATIAQIATWTGISDLDERIVVTKTIGPADFSERYHAWSSGAIGPAHTLMQSAFFRGKNMASKVKGLYY
AGGTTVPGVGVPMCLISAENVITRIKAE

Sequences:

>Translated_508_residues
MAKHAIVIGAGVAGLATAGLLAREGYHVRVFEKLDAPGGRAGQLTDSGFRWDTGPSWYLMPEAYDHFFELMGTTTEQAYE
LVDLHPAYRLFPEGSPALDVDSGVGNVATLFDALHPGAGKKVQRYLRNATDVYHLSLRHFLYTTFSNPRDFLRADILRRL
PYLARLLSSSLDTWVRNRFPHPILRQILSYPAVFLSTQPTQAPALYSLMSHTDLVEGVHYPRGGFAAIMSAIEKIDREAG
VEFYYEHEVTDITIESGRACGITAAGPHGTSTFNADVVVSAADLHHTETRLLPPHLRSYPENYWSKRNPGLGTVLIMLGV
RGHLPELAHHNLLFSKDWDPDFAAVYSGPHPSRPLGASQSIYISKTSATDSDAAPEGHENLFILVPVPANDALGHGNTYH
HTASPRVEEITRATIAQIATWTGISDLDERIVVTKTIGPADFSERYHAWSSGAIGPAHTLMQSAFFRGKNMASKVKGLYY
AGGTTVPGVGVPMCLISAENVITRIKAE
>Mature_507_residues
AKHAIVIGAGVAGLATAGLLAREGYHVRVFEKLDAPGGRAGQLTDSGFRWDTGPSWYLMPEAYDHFFELMGTTTEQAYEL
VDLHPAYRLFPEGSPALDVDSGVGNVATLFDALHPGAGKKVQRYLRNATDVYHLSLRHFLYTTFSNPRDFLRADILRRLP
YLARLLSSSLDTWVRNRFPHPILRQILSYPAVFLSTQPTQAPALYSLMSHTDLVEGVHYPRGGFAAIMSAIEKIDREAGV
EFYYEHEVTDITIESGRACGITAAGPHGTSTFNADVVVSAADLHHTETRLLPPHLRSYPENYWSKRNPGLGTVLIMLGVR
GHLPELAHHNLLFSKDWDPDFAAVYSGPHPSRPLGASQSIYISKTSATDSDAAPEGHENLFILVPVPANDALGHGNTYHH
TASPRVEEITRATIAQIATWTGISDLDERIVVTKTIGPADFSERYHAWSSGAIGPAHTLMQSAFFRGKNMASKVKGLYYA
GGTTVPGVGVPMCLISAENVITRIKAE

Specific function: Catalyzes three successive dehydrogenation reactions that lead to the introduction of three double bonds into dehydrosqualene (4,4'-diapophytoene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'- diaponeurosporene (the

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family. CrtN subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: 1.14.99.-

Molecular weight: Translated: 55609; Mature: 55478

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHAIVIGAGVAGLATAGLLAREGYHVRVFEKLDAPGGRAGQLTDSGFRWDTGPSWYLM
CCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCEEEC
PEAYDHFFELMGTTTEQAYELVDLHPAYRLFPEGSPALDVDSGVGNVATLFDALHPGAGK
HHHHHHHHHHHCCCHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCH
KVQRYLRNATDVYHLSLRHFLYTTFSNPRDFLRADILRRLPYLARLLSSSLDTWVRNRFP
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPILRQILSYPAVFLSTQPTQAPALYSLMSHTDLVEGVHYPRGGFAAIMSAIEKIDREAG
CHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
VEFYYEHEVTDITIESGRACGITAAGPHGTSTFNADVVVSAADLHHTETRLLPPHLRSYP
CEEEEECCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEHHCCCCHHCCCCHHHHHCC
ENYWSKRNPGLGTVLIMLGVRGHLPELAHHNLLFSKDWDPDFAAVYSGPHPSRPLGASQS
HHHHCCCCCCHHEEHEECCCCCCCCHHHHCCEEEECCCCCCHHEEECCCCCCCCCCCCCE
IYISKTSATDSDAAPEGHENLFILVPVPANDALGHGNTYHHTASPRVEEITRATIAQIAT
EEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
WTGISDLDERIVVTKTIGPADFSERYHAWSSGAIGPAHTLMQSAFFRGKNMASKVKGLYY
HCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCEEEE
AGGTTVPGVGVPMCLISAENVITRIKAE
ECCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKHAIVIGAGVAGLATAGLLAREGYHVRVFEKLDAPGGRAGQLTDSGFRWDTGPSWYLM
CCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCEEEC
PEAYDHFFELMGTTTEQAYELVDLHPAYRLFPEGSPALDVDSGVGNVATLFDALHPGAGK
HHHHHHHHHHHCCCHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCH
KVQRYLRNATDVYHLSLRHFLYTTFSNPRDFLRADILRRLPYLARLLSSSLDTWVRNRFP
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPILRQILSYPAVFLSTQPTQAPALYSLMSHTDLVEGVHYPRGGFAAIMSAIEKIDREAG
CHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
VEFYYEHEVTDITIESGRACGITAAGPHGTSTFNADVVVSAADLHHTETRLLPPHLRSYP
CEEEEECCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEHHCCCCHHCCCCHHHHHCC
ENYWSKRNPGLGTVLIMLGVRGHLPELAHHNLLFSKDWDPDFAAVYSGPHPSRPLGASQS
HHHHCCCCCCHHEEHEECCCCCCCCHHHHCCEEEECCCCCCHHEEECCCCCCCCCCCCCE
IYISKTSATDSDAAPEGHENLFILVPVPANDALGHGNTYHHTASPRVEEITRATIAQIAT
EEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
WTGISDLDERIVVTKTIGPADFSERYHAWSSGAIGPAHTLMQSAFFRGKNMASKVKGLYY
HCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCEEEE
AGGTTVPGVGVPMCLISAENVITRIKAE
ECCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA