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The map label for this gene is rpiB [H]

Identifier: 38234367

GI number: 38234367

Start: 1844289

End: 1844762

Strand: Reverse

Name: rpiB [H]

Synonym: DIP1796

Alternate gene names: 38234367

Gene position: 1844762-1844289 (Counterclockwise)

Preceding gene: 38234368

Following gene: 38234364

Centisome position: 74.13

GC content: 56.75

Gene sequence:

>474_bases
ATGCGCGTATACCTAGGAGCGGACCACGCAGGGTTCGATATGAAAAACATTATTGCCGATCACCTCAAAGCCAAAGGCCA
CGAGGTGATCGACTGCGGAGCTCACACATACGATGCTCTCGACGATTACCCCGCCTACTGCATCGAAGCAGCAAGCCGCG
TAGTAAACGACCCAGGCTCATTGGGCATCGTTCTCGGCGGATCCGGCAACGGCGAGCAAATTGCCGCTAACAAGGTCAAA
GGCGCTCGCTGCGCACTCGCATGGTCGGTTGAAACTGCCCGCCTCGCACGCGAACACAACAACGCACAGCTGATCGGCCT
CGGCGGCCGCATGCACTCCGAAGAAGAAGCACTAGCAATTGTCGATGCCTTCCTCGACCAAGAGTGGAGCAAAGAAGAAC
GCCACCAGCGTCGCATCGACATCCTCTGCGAATACGAGCGCACCGGAATCGCACCTGTTATTCCAGAATCCTAA

Upstream 100 bases:

>100_bases
CAGCTGGCGGCCTATCCACACTTCTTCGAGATCAAACGCACCCGAACCGAAAGCCCCCAGTTCGACTAAAACTCAACCGC
TATCGACTACACTTCCAGAT

Downstream 100 bases:

>100_bases
AAACCCGCTGACACCTTGAAGGGGTGTGCCGACCAGTTGGCCGGCACACCCCTTCAAGCATGTCAAAGACTATGAACTAG
AAATCGAAATCAAAACCATC

Product: ribose-5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRVYLGADHAGFDMKNIIADHLKAKGHEVIDCGAHTYDALDDYPAYCIEAASRVVNDPGSLGIVLGGSGNGEQIAANKVK
GARCALAWSVETARLAREHNNAQLIGLGGRMHSEEEALAIVDAFLDQEWSKEERHQRRIDILCEYERTGIAPVIPES

Sequences:

>Translated_157_residues
MRVYLGADHAGFDMKNIIADHLKAKGHEVIDCGAHTYDALDDYPAYCIEAASRVVNDPGSLGIVLGGSGNGEQIAANKVK
GARCALAWSVETARLAREHNNAQLIGLGGRMHSEEEALAIVDAFLDQEWSKEERHQRRIDILCEYERTGIAPVIPES
>Mature_157_residues
MRVYLGADHAGFDMKNIIADHLKAKGHEVIDCGAHTYDALDDYPAYCIEAASRVVNDPGSLGIVLGGSGNGEQIAANKVK
GARCALAWSVETARLAREHNNAQLIGLGGRMHSEEEALAIVDAFLDQEWSKEERHQRRIDILCEYERTGIAPVIPES

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=146, Percent_Identity=35.6164383561644, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011860
- InterPro:   IPR003500 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 17126; Mature: 17126

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVYLGADHAGFDMKNIIADHLKAKGHEVIDCGAHTYDALDDYPAYCIEAASRVVNDPGS
CEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC
LGIVLGGSGNGEQIAANKVKGARCALAWSVETARLAREHNNAQLIGLGGRMHSEEEALAI
EEEEECCCCCCCEEECCCCCCCEEEEEECHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
VDAFLDQEWSKEERHQRRIDILCEYERTGIAPVIPES
HHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRVYLGADHAGFDMKNIIADHLKAKGHEVIDCGAHTYDALDDYPAYCIEAASRVVNDPGS
CEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC
LGIVLGGSGNGEQIAANKVKGARCALAWSVETARLAREHNNAQLIGLGGRMHSEEEALAI
EEEEECCCCCCCEEECCCCCCCEEEEEECHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
VDAFLDQEWSKEERHQRRIDILCEYERTGIAPVIPES
HHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]