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The map label for this gene is ybeX [C]

Identifier: 38234287

GI number: 38234287

Start: 1752679

End: 1754007

Strand: Reverse

Name: ybeX [C]

Synonym: DIP1716

Alternate gene names: 38234287

Gene position: 1754007-1752679 (Counterclockwise)

Preceding gene: 38234288

Following gene: 38234286

Centisome position: 70.48

GC content: 51.77

Gene sequence:

>1329_bases
GTGAGCCCTGTAGTTTTAGGGCTGATTACCCTTGCTGCTTTGTTGTGTTCAGGATTGCTAGGAACCGTCGAAGCGGCAGT
CAGCTCCATTTCGCTTGCTCGAGTGGAGCAAATCGACAAAGATAAAGAAACTCGTGCGTCACGAGTGCTACTCAACGTCG
TAGAAAAACGAGCAGAGCACATCAACCTGCTTGTACTGCTCAAAACCTTTCTCGATGTGACAGCCGCGGTGTTTGCCGTC
ATGCTCACTCTGGAACTCATCGATAACGAGACGTGGGCGGTTACCGCGGCGATAGTGGGCGTAGCGCTCGTGACGTTCAC
GGTTGTCGGGGTATTTTCCCGCACGGTGGGCCGCAAGAATCCTTACACAGTGTCCTTGTCCTCGGCATTTTTGCTCAGTG
CGCTAGCGAAACTGTTAGGGCCTATTGCGCGGTTACTCATTCGCATTGGCAATATCATCGCGCCAGGGCCTGGTTTTAGA
GACGGCCCCTACAACACTGAAGTAGAATTGCGTGAAATGGTCGACATCGCCCAAGAGCACGGCGTGGTGGAGATCGAAGA
ACGTCGGATGATTCAATCCGTTTTCGATTTGGCGTCGACAACCGCGCGATCTGTGATGGTTCCCCGTACTGATATGGTGT
GGATCGAATCAGGAAAAACTGCGGGTCAGGCCACCAGTTTGTGTGTGCGATCGGGTTTTTCGCGTATCCCAGTGATCGGG
GAAACTGTTGATGACATCATCGGTATCGTCTATCTCAAAGACCTAGTTCAGCGCACCTACTATTCTACGGATAGCGGTCG
TTCAGTGCTGGTAGATGACGTTATGCGACCGGCAACTTTTGTTCCCGACTCTAAAAACCTCGATGCGCTGTTGCACGAAA
TGCAACATGATCGCAACCACATCGCCATGCTGGTAGACGAGTATGGCGGTATTGCCGGTTTGATTTCGATTGAAGACATC
CTCGAAGAAATCGTCGGTGAAATCGCCGATGAGTACGATGACCGAGAAATGGCTCCGATCGAACGACTAAACGACACGGA
GTTGCCTACCTATCGCGTTGTGTCGCGATTGTCTTTGGATGATCTTATCGAAACCATCGACGAGGATCTTGACCGAGAAA
TCGAGTTCAGCGAGGAAATTCTCGATCAAGTGGATACCGTGGGCGGACTCATTGCCTTTGAAAAAGGCAGAATCCCGTTG
CCAGGTACCACAGTGACCACGTCTGGTTTGCAGCTTCAAGCCGAAGGCGGACGTGATAGGCGCGGTCGGATTCAGGTTCG
ATCTGTGCTCGTGTCTGTTTTGCCTGTCGAATCGCTTTCCGAACTATAG

Upstream 100 bases:

>100_bases
CAAAACCGAGCAACGCAGGGGCATTCCCTTCTGCTGCTGACCGTGCAGAACTAGACAAACTTGTACCAGGCGGCGGCATT
CCGGCTATTGGGGAACCGCA

Downstream 100 bases:

>100_bases
GATGAACCCCATGAACATTTTGTCGATCCAGTCCCATGTTTCCTACGGCCACGTTGGTAACTCTGCCGCAGTGTTCCCAT
TGCAACGCATTGGGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSPVVLGLITLAALLCSGLLGTVEAAVSSISLARVEQIDKDKETRASRVLLNVVEKRAEHINLLVLLKTFLDVTAAVFAV
MLTLELIDNETWAVTAAIVGVALVTFTVVGVFSRTVGRKNPYTVSLSSAFLLSALAKLLGPIARLLIRIGNIIAPGPGFR
DGPYNTEVELREMVDIAQEHGVVEIEERRMIQSVFDLASTTARSVMVPRTDMVWIESGKTAGQATSLCVRSGFSRIPVIG
ETVDDIIGIVYLKDLVQRTYYSTDSGRSVLVDDVMRPATFVPDSKNLDALLHEMQHDRNHIAMLVDEYGGIAGLISIEDI
LEEIVGEIADEYDDREMAPIERLNDTELPTYRVVSRLSLDDLIETIDEDLDREIEFSEEILDQVDTVGGLIAFEKGRIPL
PGTTVTTSGLQLQAEGGRDRRGRIQVRSVLVSVLPVESLSEL

Sequences:

>Translated_442_residues
MSPVVLGLITLAALLCSGLLGTVEAAVSSISLARVEQIDKDKETRASRVLLNVVEKRAEHINLLVLLKTFLDVTAAVFAV
MLTLELIDNETWAVTAAIVGVALVTFTVVGVFSRTVGRKNPYTVSLSSAFLLSALAKLLGPIARLLIRIGNIIAPGPGFR
DGPYNTEVELREMVDIAQEHGVVEIEERRMIQSVFDLASTTARSVMVPRTDMVWIESGKTAGQATSLCVRSGFSRIPVIG
ETVDDIIGIVYLKDLVQRTYYSTDSGRSVLVDDVMRPATFVPDSKNLDALLHEMQHDRNHIAMLVDEYGGIAGLISIEDI
LEEIVGEIADEYDDREMAPIERLNDTELPTYRVVSRLSLDDLIETIDEDLDREIEFSEEILDQVDTVGGLIAFEKGRIPL
PGTTVTTSGLQLQAEGGRDRRGRIQVRSVLVSVLPVESLSEL
>Mature_441_residues
SPVVLGLITLAALLCSGLLGTVEAAVSSISLARVEQIDKDKETRASRVLLNVVEKRAEHINLLVLLKTFLDVTAAVFAVM
LTLELIDNETWAVTAAIVGVALVTFTVVGVFSRTVGRKNPYTVSLSSAFLLSALAKLLGPIARLLIRIGNIIAPGPGFRD
GPYNTEVELREMVDIAQEHGVVEIEERRMIQSVFDLASTTARSVMVPRTDMVWIESGKTAGQATSLCVRSGFSRIPVIGE
TVDDIIGIVYLKDLVQRTYYSTDSGRSVLVDDVMRPATFVPDSKNLDALLHEMQHDRNHIAMLVDEYGGIAGLISIEDIL
EEIVGEIADEYDDREMAPIERLNDTELPTYRVVSRLSLDDLIETIDEDLDREIEFSEEILDQVDTVGGLIAFEKGRIPLP
GTTVTTSGLQLQAEGGRDRRGRIQVRSVLVSVLPVESLSEL

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=307, Percent_Identity=28.6644951140065, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI94681046, Length=323, Percent_Identity=25.6965944272446, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI40068053, Length=361, Percent_Identity=24.6537396121884, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI40068055, Length=361, Percent_Identity=24.6537396121884, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1786879, Length=283, Percent_Identity=33.5689045936396, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI145693175, Length=313, Percent_Identity=24.2811501597444, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI87082033, Length=253, Percent_Identity=26.8774703557312, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1790664, Length=294, Percent_Identity=21.7687074829932, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788119, Length=237, Percent_Identity=27.8481012658228, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48370; Mature: 48239

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVVLGLITLAALLCSGLLGTVEAAVSSISLARVEQIDKDKETRASRVLLNVVEKRAEH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
INLLVLLKTFLDVTAAVFAVMLTLELIDNETWAVTAAIVGVALVTFTVVGVFSRTVGRKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PYTVSLSSAFLLSALAKLLGPIARLLIRIGNIIAPGPGFRDGPYNTEVELREMVDIAQEH
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
GVVEIEERRMIQSVFDLASTTARSVMVPRTDMVWIESGKTAGQATSLCVRSGFSRIPVIG
CCEEEHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCH
ETVDDIIGIVYLKDLVQRTYYSTDSGRSVLVDDVMRPATFVPDSKNLDALLHEMQHDRNH
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCH
IAMLVDEYGGIAGLISIEDILEEIVGEIADEYDDREMAPIERLNDTELPTYRVVSRLSLD
HEEHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCCHH
DLIETIDEDLDREIEFSEEILDQVDTVGGLIAFEKGRIPLPGTTVTTSGLQLQAEGGRDR
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCEEEEECCCCCC
RGRIQVRSVLVSVLPVESLSEL
CCHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure 
SPVVLGLITLAALLCSGLLGTVEAAVSSISLARVEQIDKDKETRASRVLLNVVEKRAEH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
INLLVLLKTFLDVTAAVFAVMLTLELIDNETWAVTAAIVGVALVTFTVVGVFSRTVGRKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PYTVSLSSAFLLSALAKLLGPIARLLIRIGNIIAPGPGFRDGPYNTEVELREMVDIAQEH
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
GVVEIEERRMIQSVFDLASTTARSVMVPRTDMVWIESGKTAGQATSLCVRSGFSRIPVIG
CCEEEHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCH
ETVDDIIGIVYLKDLVQRTYYSTDSGRSVLVDDVMRPATFVPDSKNLDALLHEMQHDRNH
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCH
IAMLVDEYGGIAGLISIEDILEEIVGEIADEYDDREMAPIERLNDTELPTYRVVSRLSLD
HEEHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCCHH
DLIETIDEDLDREIEFSEEILDQVDTVGGLIAFEKGRIPLPGTTVTTSGLQLQAEGGRDR
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCEEEEECCCCCC
RGRIQVRSVLVSVLPVESLSEL
CCHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]