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The map label for this gene is 38233839

Identifier: 38233839

GI number: 38233839

Start: 1254942

End: 1255808

Strand: Direct

Name: 38233839

Synonym: DIP1251

Alternate gene names: NA

Gene position: 1254942-1255808 (Clockwise)

Preceding gene: 38233828

Following gene: 38233840

Centisome position: 50.43

GC content: 47.64

Gene sequence:

>867_bases
ATGACAACCTCAACTCCTTCCGCTTCTCCCCTCGCCTTGTCGCCTTCTCGTGCTAACGATTATCAACAATGCCCATTGCT
GTACCGCTTCCGTGCCATTGACAAACTTCCAGAGCCCAAAACCGTAGCCCAAGTCAAAGGCACACTCGTACATGCCGTGC
TTGAAGAAATGCATGGCTGGCCTCGAAATGAGCGACTTTTTCCAGCTGCAGTTAAACGATTGAAACCCCATTGGTCATTA
ATGTGCAGCAAAGATACTGAATTAGTTTCGCTGGTTCCGGAAGAAGATACTTATGATTTTCTCGTAGAATGCCGCTCACT
TCTTCGAGGCTACTTTGAGATGGAAAACCCACAAGGTTTCGATGCACTGGCATGTGAAATGTACGTCAATGCGACATTGC
CTAATGGAGTACCCATCAGAGGATTCATAGACCGAGTTGATAAAGCTCCGACTGGCGAAATTCGCGTCGTGGACTACAAA
ACGGGTAAAAAACCAATTCCTCGTTTTAGCCAGCAAGCTCAATTCCAAATGCGCTTTTATGCTCTGGTGTATTGGCGGAT
CTACGGACGCATCCCAGATCAATTGCGATTGATGTATCTCAAAGTCGCCGACTCGATGTTTCTTACTCCATCACGCGAAG
AACTTGAATATTTCGAACGTGATATCCAAGAACTATGGGAGAAAATTGTCACCGACGGAGAAACCGGTCAATTTCGCCCC
AAAACTTCGAAACTCTGTGGCTGGTGTTCATTTCAAAACCTTTGTCCGGCTTTTGACGGAACACCGCCAGCCTACCCAGG
TTGGCCAGGCATAGCTGATGCCCCTCCGTGTTCGACTGTCGATGCTTCAAAGGGTTTGACAGGCTAA

Upstream 100 bases:

>100_bases
CAGTCTAACCTTCCCATCCTTTAGACAACGCGTGTTTCCTTTCAAGCTTGTGACTAGCAACATGCAAATGTCGGTCCAGG
CTCATACAATATTGAACTTG

Downstream 100 bases:

>100_bases
CCAAGGTGGAGCTTGAAGCCTGATCCCGCATAGCATGGAATAAGACTACAGCTATTGCAGGAAAGGGTGGAAAGTATTGT
GCTGAATTCCAGAATGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: RecB Family Exonuclease-Like Protein; UvrD/REP Helicase; RecB Family Protein Exonuclease; Recb Family Exonuclease

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTTSTPSASPLALSPSRANDYQQCPLLYRFRAIDKLPEPKTVAQVKGTLVHAVLEEMHGWPRNERLFPAAVKRLKPHWSL
MCSKDTELVSLVPEEDTYDFLVECRSLLRGYFEMENPQGFDALACEMYVNATLPNGVPIRGFIDRVDKAPTGEIRVVDYK
TGKKPIPRFSQQAQFQMRFYALVYWRIYGRIPDQLRLMYLKVADSMFLTPSREELEYFERDIQELWEKIVTDGETGQFRP
KTSKLCGWCSFQNLCPAFDGTPPAYPGWPGIADAPPCSTVDASKGLTG

Sequences:

>Translated_288_residues
MTTSTPSASPLALSPSRANDYQQCPLLYRFRAIDKLPEPKTVAQVKGTLVHAVLEEMHGWPRNERLFPAAVKRLKPHWSL
MCSKDTELVSLVPEEDTYDFLVECRSLLRGYFEMENPQGFDALACEMYVNATLPNGVPIRGFIDRVDKAPTGEIRVVDYK
TGKKPIPRFSQQAQFQMRFYALVYWRIYGRIPDQLRLMYLKVADSMFLTPSREELEYFERDIQELWEKIVTDGETGQFRP
KTSKLCGWCSFQNLCPAFDGTPPAYPGWPGIADAPPCSTVDASKGLTG
>Mature_287_residues
TTSTPSASPLALSPSRANDYQQCPLLYRFRAIDKLPEPKTVAQVKGTLVHAVLEEMHGWPRNERLFPAAVKRLKPHWSLM
CSKDTELVSLVPEEDTYDFLVECRSLLRGYFEMENPQGFDALACEMYVNATLPNGVPIRGFIDRVDKAPTGEIRVVDYKT
GKKPIPRFSQQAQFQMRFYALVYWRIYGRIPDQLRLMYLKVADSMFLTPSREELEYFERDIQELWEKIVTDGETGQFRPK
TSKLCGWCSFQNLCPAFDGTPPAYPGWPGIADAPPCSTVDASKGLTG

Specific function: Unknown

COG id: COG2887

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32748; Mature: 32617

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTPSASPLALSPSRANDYQQCPLLYRFRAIDKLPEPKTVAQVKGTLVHAVLEEMHGW
CCCCCCCCCCEEECCCCCCCHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PRNERLFPAAVKRLKPHWSLMCSKDTELVSLVPEEDTYDFLVECRSLLRGYFEMENPQGF
CCCCCCCHHHHHHHCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
DALACEMYVNATLPNGVPIRGFIDRVDKAPTGEIRVVDYKTGKKPIPRFSQQAQFQMRFY
HHEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
ALVYWRIYGRIPDQLRLMYLKVADSMFLTPSREELEYFERDIQELWEKIVTDGETGQFRP
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KTSKLCGWCSFQNLCPAFDGTPPAYPGWPGIADAPPCSTVDASKGLTG
CHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTSTPSASPLALSPSRANDYQQCPLLYRFRAIDKLPEPKTVAQVKGTLVHAVLEEMHGW
CCCCCCCCCEEECCCCCCCHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PRNERLFPAAVKRLKPHWSLMCSKDTELVSLVPEEDTYDFLVECRSLLRGYFEMENPQGF
CCCCCCCHHHHHHHCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
DALACEMYVNATLPNGVPIRGFIDRVDKAPTGEIRVVDYKTGKKPIPRFSQQAQFQMRFY
HHEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
ALVYWRIYGRIPDQLRLMYLKVADSMFLTPSREELEYFERDIQELWEKIVTDGETGQFRP
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KTSKLCGWCSFQNLCPAFDGTPPAYPGWPGIADAPPCSTVDASKGLTG
CHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA