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The map label for this gene is pqqE [H]

Identifier: 38233743

GI number: 38233743

Start: 1140904

End: 1142103

Strand: Direct

Name: pqqE [H]

Synonym: DIP1153

Alternate gene names: 38233743

Gene position: 1140904-1142103 (Clockwise)

Preceding gene: 38233742

Following gene: 38233744

Centisome position: 45.84

GC content: 48.58

Gene sequence:

>1200_bases
GTGCCTCATACATCAAGTGATGTTGCTGATTTTAAAGAGGTCCGGCACATTCGTGGAGACATCAACCTCAAACCATTCAT
TGCAATTTGGGAGGTAACGAGGGCATGTGGCTTGGTGTGTCAGCATTGTCGGGCGGACGCGCAGCACGAGCCGCATCCTG
AACAGCTGACCACTGAACAGGGAAAACAATTGCTTTCAGACCTTGCGTCATATGAACGACCTAAGCCATTGGTGGTCCTT
ACTGGGGGTGACCCCTTTGAGCGTCAAGACCTTGAAGAGTTAGTGGATTATGGTACTTCTCTTGGCTTAAATGTTTCTCT
GTCACCATCGGTCACCCCGCGTTTGACTCCAGAGCGAATTCACCGACTTTATGAGCTCGGCGGCAAAGCAATGTCAATGT
CTTTAGATGGTGCAACGGCTGAAACGCATGATGCCTTTCGCGGTTTCAGTGGGACTTTCGACACGACTGTTAAACGCGCA
GCGGATATTCTTCAAGCAGGTTTTAGGCTGCAAATCAATTCCACTCTCACGAAGTCCAACATCCGAGAAGCTCCAGCATT
GCTGAAGACGGTGATGGGGATGGGCGCAAAAATGTGGTACGTATTTTTCCTTGTACCAACTGGCCGTGGAGCTGCCTTAA
ACGCGTTAAACCCTCAAGAACGTGAAGATGTTCTCCATTGGCTTGCCGACGTATCCGATCGTATTGCAATTAAAACTACT
GAAGCACCACAATACCGTCGCGTGGTGATCCAGCAGCGCCTACGGAAAGAAGGCCAGCTTGATAAGTATCAAGGCGGTGA
ACTTTATCGATACCTAACCCAAAAAACTACGGAATTATTAGGTGCCCACCCCGTTCAACCACGCCGCCCACGTCCGCCGA
TGGCAGTTAATTCAGGGTCAGGTTTTGTTTTTATTGATCACATCGGAGATGTCTACCCTAGTGGCTTCTTGCCAATTCAC
TGCGGCAATGTAAAACAAGCATCAATTAAAACTATTTATTCGCAATCGCCAACATTTCAAGCTCTAAGAGATCCCAACCA
CTGGCATGGTAAATGTTCGGTATGTGAGTTTCATGATGTCTGTGGTGGCTCGCGTTCGACTGCTTATGCACTCACTGGTG
ATGTTCGTGCATCAGATCCTACGTGTGTATACATGCCGCAGCCGTGGTTAGATGCGGGGCATTCTGGTGTAGAAGATTAA

Upstream 100 bases:

>100_bases
GAAAGGTTGATTTTTGCGGATTACTGCTCAGTGGTTATTTTTGCCCCAAGCCGGAGGTCAACGTCAGGTGTCAACAACTC
TCAACCCAGCTTCGCTCCAA

Downstream 100 bases:

>100_bases
AACTTGGCGTCTCGGGCGAGAAGTTGATTCAGACACTACACTTTTGGATATGGCTTTTGCGGCGGAACATCCAGAGTTAT
CGGTTTCAGAATTTCGTCCG

Product: putative coenzyme PQQ synthesis-like protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MPHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHCRADAQHEPHPEQLTTEQGKQLLSDLASYERPKPLVVL
TGGDPFERQDLEELVDYGTSLGLNVSLSPSVTPRLTPERIHRLYELGGKAMSMSLDGATAETHDAFRGFSGTFDTTVKRA
ADILQAGFRLQINSTLTKSNIREAPALLKTVMGMGAKMWYVFFLVPTGRGAALNALNPQEREDVLHWLADVSDRIAIKTT
EAPQYRRVVIQQRLRKEGQLDKYQGGELYRYLTQKTTELLGAHPVQPRRPRPPMAVNSGSGFVFIDHIGDVYPSGFLPIH
CGNVKQASIKTIYSQSPTFQALRDPNHWHGKCSVCEFHDVCGGSRSTAYALTGDVRASDPTCVYMPQPWLDAGHSGVED

Sequences:

>Translated_399_residues
MPHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHCRADAQHEPHPEQLTTEQGKQLLSDLASYERPKPLVVL
TGGDPFERQDLEELVDYGTSLGLNVSLSPSVTPRLTPERIHRLYELGGKAMSMSLDGATAETHDAFRGFSGTFDTTVKRA
ADILQAGFRLQINSTLTKSNIREAPALLKTVMGMGAKMWYVFFLVPTGRGAALNALNPQEREDVLHWLADVSDRIAIKTT
EAPQYRRVVIQQRLRKEGQLDKYQGGELYRYLTQKTTELLGAHPVQPRRPRPPMAVNSGSGFVFIDHIGDVYPSGFLPIH
CGNVKQASIKTIYSQSPTFQALRDPNHWHGKCSVCEFHDVCGGSRSTAYALTGDVRASDPTCVYMPQPWLDAGHSGVED
>Mature_398_residues
PHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHCRADAQHEPHPEQLTTEQGKQLLSDLASYERPKPLVVLT
GGDPFERQDLEELVDYGTSLGLNVSLSPSVTPRLTPERIHRLYELGGKAMSMSLDGATAETHDAFRGFSGTFDTTVKRAA
DILQAGFRLQINSTLTKSNIREAPALLKTVMGMGAKMWYVFFLVPTGRGAALNALNPQEREDVLHWLADVSDRIAIKTTE
APQYRRVVIQQRLRKEGQLDKYQGGELYRYLTQKTTELLGAHPVQPRRPRPPMAVNSGSGFVFIDHIGDVYPSGFLPIHC
GNVKQASIKTIYSQSPTFQALRDPNHWHGKCSVCEFHDVCGGSRSTAYALTGDVRASDPTCVYMPQPWLDAGHSGVED

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44295; Mature: 44164

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHCRADAQHEPHPEQLTTEQ
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
GKQLLSDLASYERPKPLVVLTGGDPFERQDLEELVDYGTSLGLNVSLSPSVTPRLTPERI
HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
HRLYELGGKAMSMSLDGATAETHDAFRGFSGTFDTTVKRAADILQAGFRLQINSTLTKSN
HHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHH
IREAPALLKTVMGMGAKMWYVFFLVPTGRGAALNALNPQEREDVLHWLADVSDRIAIKTT
HHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCEEEEEC
EAPQYRRVVIQQRLRKEGQLDKYQGGELYRYLTQKTTELLGAHPVQPRRPRPPMAVNSGS
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC
GFVFIDHIGDVYPSGFLPIHCGNVKQASIKTIYSQSPTFQALRDPNHWHGKCSVCEFHDV
CEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEHHHH
CGGSRSTAYALTGDVRASDPTCVYMPQPWLDAGHSGVED
CCCCCCCEEEEECCCCCCCCEEEECCCHHHCCCCCCCCC
>Mature Secondary Structure 
PHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHCRADAQHEPHPEQLTTEQ
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
GKQLLSDLASYERPKPLVVLTGGDPFERQDLEELVDYGTSLGLNVSLSPSVTPRLTPERI
HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
HRLYELGGKAMSMSLDGATAETHDAFRGFSGTFDTTVKRAADILQAGFRLQINSTLTKSN
HHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHH
IREAPALLKTVMGMGAKMWYVFFLVPTGRGAALNALNPQEREDVLHWLADVSDRIAIKTT
HHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCEEEEEC
EAPQYRRVVIQQRLRKEGQLDKYQGGELYRYLTQKTTELLGAHPVQPRRPRPPMAVNSGS
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC
GFVFIDHIGDVYPSGFLPIHCGNVKQASIKTIYSQSPTFQALRDPNHWHGKCSVCEFHDV
CEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEHHHH
CGGSRSTAYALTGDVRASDPTCVYMPQPWLDAGHSGVED
CCCCCCCEEEEECCCCCCCCEEEECCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA