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The map label for this gene is ybbN [C]

Identifier: 38233658

GI number: 38233658

Start: 1042460

End: 1043356

Strand: Direct

Name: ybbN [C]

Synonym: DIP1064

Alternate gene names: 38233658

Gene position: 1042460-1043356 (Clockwise)

Preceding gene: 38233656

Following gene: 38233661

Centisome position: 41.89

GC content: 52.06

Gene sequence:

>897_bases
ATGACAACGCCCAATCGTTTTGTTGCAGGTGCGATTGATCTAGGAGAGGTAAAAGCTCGTGCGGAGGCGCGTTCTCAAGC
ACAGCGAGCGGGTCAGTCGTCTGTGACTGAGGTGGAGCCCACAGTAACCATCACTATGGATAACGTGGAAGAGCAGCTTA
TTAAGCGTTCCATGCAGGTTCCCGTTGTGGTGTTGATTGGTACTCCACGAAGCCCCGACTCGGAACAGTTGCGAGCGGAT
CTTAGCCAGATTGCCAGCGGCGCAAGCTTGAGTTTCATTTTCGCCTATATTGATGCGGACGCTACTCCGCAGGTTGCCCA
AATGTTTGGCATTCAGGGCTTGCCGACGGTCGTGGCGTTGGCTCAAGGTCAGCCTTTGGCTAATTTTGAGGGCGGTCAGC
CAATGGAAGCGTTGCAGCAATGGACAGCTGCCGTAGTTAAAGCCGTCGAAGGGAAACTACCGGGCATCACAGGTGATGAT
GCAGAAGCAGAGCCAGCAGAGGATCCTCGCTTTGAACCTGCTACTGAGGCATTGAATGCTGGCGATTTTGATGCGGCCAT
TGCGGTTTATGAGGAAATTTTGCGCCATGAACCAAAGAATCAGATGGCCTTGCAAGCGCGAGACAACGCCAGATTGTTGT
CGCGGCTGAAGGATGCTGACCGGAGCGTCGATCCTATTGCTGTTGCAGATGCTGATCTACAGGACGTGGATAAAGCATTC
GCTGCTGCTGATGCAGAGATCACGACTGGAAAAGTAGAGGAAGCGTTTGATCGTCTCATCGAACTGTTGCCTAACGAGAA
AGTTAGGACGCGGTTGCTGGAATTGTATTCGGTGTTTGAGCCTAGTGATTCTCGTGTGCAGGCTGCCCGATCAAAAATGG
CAAGCAAATTGTTTTGA

Upstream 100 bases:

>100_bases
TACTTCGATTTACTTCATATAAAACGATCGACCACGCAAAAATTGGTGGAAGAACGTAGGCTGGCACAGGTAAATACTTT
GCTGAGGAGTGAAAAATATC

Downstream 100 bases:

>100_bases
TCGTTAATGGGCTCTTCCGGTTTTAGAGTGCATTGATTAGTTCGCCGGGGGTTCGGGCGTGGCACTACGCGGAGTGGGAC
GTTTTCCATAACCATGGCTT

Product: putative thioredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MTTPNRFVAGAIDLGEVKARAEARSQAQRAGQSSVTEVEPTVTITMDNVEEQLIKRSMQVPVVVLIGTPRSPDSEQLRAD
LSQIASGASLSFIFAYIDADATPQVAQMFGIQGLPTVVALAQGQPLANFEGGQPMEALQQWTAAVVKAVEGKLPGITGDD
AEAEPAEDPRFEPATEALNAGDFDAAIAVYEEILRHEPKNQMALQARDNARLLSRLKDADRSVDPIAVADADLQDVDKAF
AAADAEITTGKVEEAFDRLIELLPNEKVRTRLLELYSVFEPSDSRVQAARSKMASKLF

Sequences:

>Translated_298_residues
MTTPNRFVAGAIDLGEVKARAEARSQAQRAGQSSVTEVEPTVTITMDNVEEQLIKRSMQVPVVVLIGTPRSPDSEQLRAD
LSQIASGASLSFIFAYIDADATPQVAQMFGIQGLPTVVALAQGQPLANFEGGQPMEALQQWTAAVVKAVEGKLPGITGDD
AEAEPAEDPRFEPATEALNAGDFDAAIAVYEEILRHEPKNQMALQARDNARLLSRLKDADRSVDPIAVADADLQDVDKAF
AAADAEITTGKVEEAFDRLIELLPNEKVRTRLLELYSVFEPSDSRVQAARSKMASKLF
>Mature_297_residues
TTPNRFVAGAIDLGEVKARAEARSQAQRAGQSSVTEVEPTVTITMDNVEEQLIKRSMQVPVVVLIGTPRSPDSEQLRADL
SQIASGASLSFIFAYIDADATPQVAQMFGIQGLPTVVALAQGQPLANFEGGQPMEALQQWTAAVVKAVEGKLPGITGDDA
EAEPAEDPRFEPATEALNAGDFDAAIAVYEEILRHEPKNQMALQARDNARLLSRLKDADRSVDPIAVADADLQDVDKAFA
AADAEITTGKVEEAFDRLIELLPNEKVRTRLLELYSVFEPSDSRVQAARSKMASKLF

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=101, Percent_Identity=36.6336633663366, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 32148; Mature: 32017

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPNRFVAGAIDLGEVKARAEARSQAQRAGQSSVTEVEPTVTITMDNVEEQLIKRSMQV
CCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHCCC
PVVVLIGTPRSPDSEQLRADLSQIASGASLSFIFAYIDADATPQVAQMFGIQGLPTVVAL
CEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCHHHHHH
AQGQPLANFEGGQPMEALQQWTAAVVKAVEGKLPGITGDDAEAEPAEDPRFEPATEALNA
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
GDFDAAIAVYEEILRHEPKNQMALQARDNARLLSRLKDADRSVDPIAVADADLQDVDKAF
CCHHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH
AAADAEITTGKVEEAFDRLIELLPNEKVRTRLLELYSVFEPSDSRVQAARSKMASKLF
HHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTPNRFVAGAIDLGEVKARAEARSQAQRAGQSSVTEVEPTVTITMDNVEEQLIKRSMQV
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHCCC
PVVVLIGTPRSPDSEQLRADLSQIASGASLSFIFAYIDADATPQVAQMFGIQGLPTVVAL
CEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCHHHHHH
AQGQPLANFEGGQPMEALQQWTAAVVKAVEGKLPGITGDDAEAEPAEDPRFEPATEALNA
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
GDFDAAIAVYEEILRHEPKNQMALQARDNARLLSRLKDADRSVDPIAVADADLQDVDKAF
CCHHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH
AAADAEITTGKVEEAFDRLIELLPNEKVRTRLLELYSVFEPSDSRVQAARSKMASKLF
HHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]