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The map label for this gene is dppC [H]

Identifier: 38233554

GI number: 38233554

Start: 930332

End: 931285

Strand: Direct

Name: dppC [H]

Synonym: DIP0958

Alternate gene names: 38233554

Gene position: 930332-931285 (Clockwise)

Preceding gene: 38233553

Following gene: 38233555

Centisome position: 37.38

GC content: 55.14

Gene sequence:

>954_bases
ATGCATAACAACAACTTTTCGCGTCGTGGCCAAGAGCATTTCGTTTCCAGCGTCGACGAAACCGGTCTGGGTGCTGTCGA
CGCCGTTGCTGATGAGTCGGCACCAACCTCTATGTGGGGCGAAGCATGGACCTACTTACGACGCCGCCCTTTGTTCTGGG
TTTCAGCAGCGTTGATCTTTCTCGCTTTGCTCATGGCAATCGTGCCGCAGCTTTTTACCTCCACTGATCCGCAGTTCTGT
GAACTGGGAAAGTCGTTGGCAAAACCTGCACCTGGTCACCCCTTTGGTTTCGACCGTCAAGGTTGTGACATTTACTCCCG
CATGATTTACGGCGCACGCGCGTCCGTTGCCGTAGGCGTGCTCACTACCATCGCAGTGGTGCTAATCGGTACCGCGATTG
GTTCCGCAGCAGGCTACATCGGTGGTTTCTTGGACACCTTACTGTCGCGCCTGACAGATATTTTCTTCGCGGTGCCTCTC
GTGCTCGCCGCCATCGTTGTAATGCAGATGTTCAAGGAGTCTCGCTCCATCATCACTGTTGTGGTGGTTTTGGCGTTGTT
TGGTTGGACCAATATTGCCCGCATTACTCGCGGTGCGGTGTTGTCCACTAAGAACGAAGAATTCGTTACCGCTGCTCGCG
CGGTTGGTGCCTCAAAGTGGCGTATTCTCACCACTCACGTACTTCCTAACTCCGCAGCACCCATCATTGTGTATGCCACT
GTGGCATTGGGTACTTTCATCGTGGCAGAGGCAACCTTGTCCTTCCTAGGAATTGGCCTCCCACCGAGCATCGTGTCGTG
GGGTGGCGACATCGCCAAGGCACAAGCATCGCTACGCACGCAGCCCATGGTGCTGTTCTATCCTGCCGTTGCCCTTGGCC
TTACCGTCTTGAGTTTCATCATGATGGGCGACGCCGTCCGCGACGCCCTCGATCCAAAGTCTAGGAAGCGATAA

Upstream 100 bases:

>100_bases
ACTACGGTGGTGTCATTTACCACCGTTCTCGTGATCGTCTACATCATCGCCAACTTGGTCGTGGACTTAATCTACGCCCT
GCTTGACCCAAGGATCCGCT

Downstream 100 bases:

>100_bases
TCATGTCTGAGAAAAAACAACAGCCGCTTCTAGAGATGCGAGACGTTCGCATCGCGTTTACGTCCACCACCGGAACCGTT
GAAGCAGTCCGTGGAATTGA

Product: putative peptide transport system membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MHNNNFSRRGQEHFVSSVDETGLGAVDAVADESAPTSMWGEAWTYLRRRPLFWVSAALIFLALLMAIVPQLFTSTDPQFC
ELGKSLAKPAPGHPFGFDRQGCDIYSRMIYGARASVAVGVLTTIAVVLIGTAIGSAAGYIGGFLDTLLSRLTDIFFAVPL
VLAAIVVMQMFKESRSIITVVVVLALFGWTNIARITRGAVLSTKNEEFVTAARAVGASKWRILTTHVLPNSAAPIIVYAT
VALGTFIVAEATLSFLGIGLPPSIVSWGGDIAKAQASLRTQPMVLFYPAVALGLTVLSFIMMGDAVRDALDPKSRKR

Sequences:

>Translated_317_residues
MHNNNFSRRGQEHFVSSVDETGLGAVDAVADESAPTSMWGEAWTYLRRRPLFWVSAALIFLALLMAIVPQLFTSTDPQFC
ELGKSLAKPAPGHPFGFDRQGCDIYSRMIYGARASVAVGVLTTIAVVLIGTAIGSAAGYIGGFLDTLLSRLTDIFFAVPL
VLAAIVVMQMFKESRSIITVVVVLALFGWTNIARITRGAVLSTKNEEFVTAARAVGASKWRILTTHVLPNSAAPIIVYAT
VALGTFIVAEATLSFLGIGLPPSIVSWGGDIAKAQASLRTQPMVLFYPAVALGLTVLSFIMMGDAVRDALDPKSRKR
>Mature_317_residues
MHNNNFSRRGQEHFVSSVDETGLGAVDAVADESAPTSMWGEAWTYLRRRPLFWVSAALIFLALLMAIVPQLFTSTDPQFC
ELGKSLAKPAPGHPFGFDRQGCDIYSRMIYGARASVAVGVLTTIAVVLIGTAIGSAAGYIGGFLDTLLSRLTDIFFAVPL
VLAAIVVMQMFKESRSIITVVVVLALFGWTNIARITRGAVLSTKNEEFVTAARAVGASKWRILTTHVLPNSAAPIIVYAT
VALGTFIVAEATLSFLGIGLPPSIVSWGGDIAKAQASLRTQPMVLFYPAVALGLTVLSFIMMGDAVRDALDPKSRKR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=36.6906474820144, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1787760, Length=274, Percent_Identity=32.1167883211679, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1787498, Length=291, Percent_Identity=34.020618556701, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=32.7868852459016, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1789964, Length=292, Percent_Identity=34.5890410958904, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1788505, Length=233, Percent_Identity=30.4721030042918, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787549, Length=216, Percent_Identity=31.4814814814815, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33982; Mature: 33982

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNNNFSRRGQEHFVSSVDETGLGAVDAVADESAPTSMWGEAWTYLRRRPLFWVSAALIF
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LALLMAIVPQLFTSTDPQFCELGKSLAKPAPGHPFGFDRQGCDIYSRMIYGARASVAVGV
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH
LTTIAVVLIGTAIGSAAGYIGGFLDTLLSRLTDIFFAVPLVLAAIVVMQMFKESRSIITV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVLALFGWTNIARITRGAVLSTKNEEFVTAARAVGASKWRILTTHVLPNSAAPIIVYAT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
VALGTFIVAEATLSFLGIGLPPSIVSWGGDIAKAQASLRTQPMVLFYPAVALGLTVLSFI
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MMGDAVRDALDPKSRKR
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHNNNFSRRGQEHFVSSVDETGLGAVDAVADESAPTSMWGEAWTYLRRRPLFWVSAALIF
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LALLMAIVPQLFTSTDPQFCELGKSLAKPAPGHPFGFDRQGCDIYSRMIYGARASVAVGV
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH
LTTIAVVLIGTAIGSAAGYIGGFLDTLLSRLTDIFFAVPLVLAAIVVMQMFKESRSIITV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVLALFGWTNIARITRGAVLSTKNEEFVTAARAVGASKWRILTTHVLPNSAAPIIVYAT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
VALGTFIVAEATLSFLGIGLPPSIVSWGGDIAKAQASLRTQPMVLFYPAVALGLTVLSFI
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MMGDAVRDALDPKSRKR
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]