| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is mshB [H]
Identifier: 38233523
GI number: 38233523
Start: 899713
End: 900600
Strand: Direct
Name: mshB [H]
Synonym: DIP0927
Alternate gene names: 38233523
Gene position: 899713-900600 (Clockwise)
Preceding gene: 38233519
Following gene: 38233524
Centisome position: 36.15
GC content: 51.91
Gene sequence:
>888_bases ATGAGCTCACTTTCGTCTCCGGCACGTTTGCTTGCTATTCATGCCCACCCAGACGATGAATCAAGTAAGGGTGCAGCCAC GATGGCGAAATATGTGGCTGAGGGGCATGAGGTCATGGTGGTGACCTGCACCGGCGGTGAACTTGGTGATGTGCTTAATC CGTCGCTTGATAAAACTGCGGTGGAGGGCAGGATTGCCGAGGTTCGTCGTGAAGAAATGGCTCAAGCAGTCAAAGAATTA GGAGTCCAGCACCGGTGGTTGGGGTATCACGATTCTGGTTTCCCCGAGGGGGAACCGCATCCACCGGTTCCGCCAGGAAG CTTCGCACTCGAAGATTCTGATGAAGTGGCGGCGAAGATCGTGGAGATTATTCGCGAGTTTCGCCCGCACGTAATCGTTA CGTATGACGAAAACGGCGGATACCCACACCCGGATCATCTGAAAGTTCATGAGGTATCTATGCTGGCGTGGGATCTGGCG GGTGACCCCGACTATCGTCTTGACCTAGGCCAGCCGTGGGCTCCGTTGAAGCTTTATTACACACATGGTTTTATTCGCCA ACGCATGGAGATGTTCCATAATCTGCTGGTTGAGCAAGGGAAACCGAGTCCTTATGAGGGGATTTTAGATCGTTGGCTTG AGCACCGTGCAGACATCATGGCACGAGTAACAACGCAGGTGTATGCCGCAGACTATTTTGATCGTCGTGACGCGGCTCTT AAAGCTCACGCCACGCAAATTGATCCGGCAGGCACATTTTTTGCTACACCGATTGAAACCCAACAACAATTGTGGCCTAC AGAAGAATTTGAGCTAGCTCGCACACGCGTTTCTACTTCCTTGCCGGAGGATGATCTTTTTGAAGGAATCGATATCTCGG CAGATTAA
Upstream 100 bases:
>100_bases TGAAGTTGATACTCTTAAAACGATGACAACTTATTGCAACTGTGGCCATTGTGTGTTGCTAGCAATGTAGATCCCCCAAG GTAAAAGGACTGTAACGACC
Downstream 100 bases:
>100_bases GCTAGCAAACAGTGGCCTCTGCTTAGAGGTTTGTGCGCGTTACGCATAAGATGAATGCGATTACCGTACTCCGGCGAGTG GAAAGAAGTAGGAAGAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSSLSSPARLLAIHAHPDDESSKGAATMAKYVAEGHEVMVVTCTGGELGDVLNPSLDKTAVEGRIAEVRREEMAQAVKEL GVQHRWLGYHDSGFPEGEPHPPVPPGSFALEDSDEVAAKIVEIIREFRPHVIVTYDENGGYPHPDHLKVHEVSMLAWDLA GDPDYRLDLGQPWAPLKLYYTHGFIRQRMEMFHNLLVEQGKPSPYEGILDRWLEHRADIMARVTTQVYAADYFDRRDAAL KAHATQIDPAGTFFATPIETQQQLWPTEEFELARTRVSTSLPEDDLFEGIDISAD
Sequences:
>Translated_295_residues MSSLSSPARLLAIHAHPDDESSKGAATMAKYVAEGHEVMVVTCTGGELGDVLNPSLDKTAVEGRIAEVRREEMAQAVKEL GVQHRWLGYHDSGFPEGEPHPPVPPGSFALEDSDEVAAKIVEIIREFRPHVIVTYDENGGYPHPDHLKVHEVSMLAWDLA GDPDYRLDLGQPWAPLKLYYTHGFIRQRMEMFHNLLVEQGKPSPYEGILDRWLEHRADIMARVTTQVYAADYFDRRDAAL KAHATQIDPAGTFFATPIETQQQLWPTEEFELARTRVSTSLPEDDLFEGIDISAD >Mature_294_residues SSLSSPARLLAIHAHPDDESSKGAATMAKYVAEGHEVMVVTCTGGELGDVLNPSLDKTAVEGRIAEVRREEMAQAVKELG VQHRWLGYHDSGFPEGEPHPPVPPGSFALEDSDEVAAKIVEIIREFRPHVIVTYDENGGYPHPDHLKVHEVSMLAWDLAG DPDYRLDLGQPWAPLKLYYTHGFIRQRMEMFHNLLVEQGKPSPYEGILDRWLEHRADIMARVTTQVYAADYFDRRDAALK AHATQIDPAGTFFATPIETQQQLWPTEEFELARTRVSTSLPEDDLFEGIDISAD
Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway [H]
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MshB deacetylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 - InterPro: IPR017810 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: =3.5.1.103 [H]
Molecular weight: Translated: 33038; Mature: 32907
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSSPARLLAIHAHPDDESSKGAATMAKYVAEGHEVMVVTCTGGELGDVLNPSLDKTA CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCHHH VEGRIAEVRREEMAQAVKELGVQHRWLGYHDSGFPEGEPHPPVPPGSFALEDSDEVAAKI HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH VEIIREFRPHVIVTYDENGGYPHPDHLKVHEVSMLAWDLAGDPDYRLDLGQPWAPLKLYY HHHHHHHCCCEEEEEECCCCCCCCCCEEEEEHEEEEEECCCCCCCEEECCCCCCCEEEEH THGFIRQRMEMFHNLLVEQGKPSPYEGILDRWLEHRADIMARVTTQVYAADYFDRRDAAL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAHATQIDPAGTFFATPIETQQQLWPTEEFELARTRVSTSLPEDDLFEGIDISAD HHHCCCCCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCC >Mature Secondary Structure SSLSSPARLLAIHAHPDDESSKGAATMAKYVAEGHEVMVVTCTGGELGDVLNPSLDKTA CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCHHH VEGRIAEVRREEMAQAVKELGVQHRWLGYHDSGFPEGEPHPPVPPGSFALEDSDEVAAKI HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH VEIIREFRPHVIVTYDENGGYPHPDHLKVHEVSMLAWDLAGDPDYRLDLGQPWAPLKLYY HHHHHHHCCCEEEEEECCCCCCCCCCEEEEEHEEEEEECCCCCCCEEECCCCCCCEEEEH THGFIRQRMEMFHNLLVEQGKPSPYEGILDRWLEHRADIMARVTTQVYAADYFDRRDAAL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAHATQIDPAGTFFATPIETQQQLWPTEEFELARTRVSTSLPEDDLFEGIDISAD HHHCCCCCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA