| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233519
Identifier: 38233519
GI number: 38233519
Start: 896926
End: 897756
Strand: Direct
Name: 38233519
Synonym: DIP0923
Alternate gene names: NA
Gene position: 896926-897756 (Clockwise)
Preceding gene: 38233518
Following gene: 38233523
Centisome position: 36.04
GC content: 54.27
Gene sequence:
>831_bases ATGCGCAGTAGCAATCCGGTCTTGAATTCTCTGACGGGTACCCGCCAAAACTATGCTCAAGCGGGCTACCAGCAGCAAGC GTTCAACCCTATGTCCCAGTATGACCAGTATGGTCAGTCCGTTACCTCAGCTGGCGCTGCAGAGCGTCCTATGACTGTGG ACGATGTGGTGACCAAAACTGGTATCACCGTCGGCGTTATTATCGCCTTCGCCGTGGTTAACTTTGCGTTGGCCACGGTT AACCCTGGTCTTGCATTGATCCTTACCGGTGTTGGTGCCATCGGTGGCTTGATCACCGTCTTGATCAGCACCTTTGGCCG TAAATATGGTTCGGCAGCAGTGACCTTGACCTACGCGGCATTTGAGGGCCTGTTTGTCGGCGGCATTTCCTTGGTGCTTT CCGGTGCGATGGTGGGTGGCCAAAATGCTGGTGCCTTGATCGGTCAAGCAGTCCTTGGCACCATCGGCGTATTCCTCGGA ATGCTCTACGTGTACAAGACGGGTGCTGTGAAGGTAACCCCTAAGTTCAACCGCATCCTCACGGGATCGTTGATCGGTGT GCTGGTTCTAGCTTTGGGCAACATGGTTCTGGGCTTCTTTGGTATCAACCTAGGTCTGTACTCCGGCGGCCCAATCGCCA TCATTTTCTCCCTGTTCTGCATTGGTTTGGCAGCGATGAGCTTCCTTCAAGACTTTGACATCGCAGATCGTCTGATCCGT CAGGGTGCGCCAGCAAAGAATGCTTGGGGCGTGGCTCTGGGCTTGGCAGTGACCTTGGTCTGGCTCTACACCGAGATCCT GCGCTTGCTGAGCTACTTTAATCAGCGTTAA
Upstream 100 bases:
>100_bases CTAGGGAACTAAAAAGCATTGCGATGCGTTATTGCAGATGTACGAAGATGTTCCTTTGGCAAAGATGTAGCCAAGGGCGT TGAAAGGAAAGTGTCGCACA
Downstream 100 bases:
>100_bases CAAATAAAAACGCGAGGGCGGTACCGAGTAACACATGTTGTGTGGACTCGGTACCGCCCTCGCGTTTCTTTATAAACTTA ATGCCTCGCCATCGACAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRSSNPVLNSLTGTRQNYAQAGYQQQAFNPMSQYDQYGQSVTSAGAAERPMTVDDVVTKTGITVGVIIAFAVVNFALATV NPGLALILTGVGAIGGLITVLISTFGRKYGSAAVTLTYAAFEGLFVGGISLVLSGAMVGGQNAGALIGQAVLGTIGVFLG MLYVYKTGAVKVTPKFNRILTGSLIGVLVLALGNMVLGFFGINLGLYSGGPIAIIFSLFCIGLAAMSFLQDFDIADRLIR QGAPAKNAWGVALGLAVTLVWLYTEILRLLSYFNQR
Sequences:
>Translated_276_residues MRSSNPVLNSLTGTRQNYAQAGYQQQAFNPMSQYDQYGQSVTSAGAAERPMTVDDVVTKTGITVGVIIAFAVVNFALATV NPGLALILTGVGAIGGLITVLISTFGRKYGSAAVTLTYAAFEGLFVGGISLVLSGAMVGGQNAGALIGQAVLGTIGVFLG MLYVYKTGAVKVTPKFNRILTGSLIGVLVLALGNMVLGFFGINLGLYSGGPIAIIFSLFCIGLAAMSFLQDFDIADRLIR QGAPAKNAWGVALGLAVTLVWLYTEILRLLSYFNQR >Mature_276_residues MRSSNPVLNSLTGTRQNYAQAGYQQQAFNPMSQYDQYGQSVTSAGAAERPMTVDDVVTKTGITVGVIIAFAVVNFALATV NPGLALILTGVGAIGGLITVLISTFGRKYGSAAVTLTYAAFEGLFVGGISLVLSGAMVGGQNAGALIGQAVLGTIGVFLG MLYVYKTGAVKVTPKFNRILTGSLIGVLVLALGNMVLGFFGINLGLYSGGPIAIIFSLFCIGLAAMSFLQDFDIADRLIR QGAPAKNAWGVALGLAVTLVWLYTEILRLLSYFNQR
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28824; Mature: 28824
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSNPVLNSLTGTRQNYAQAGYQQQAFNPMSQYDQYGQSVTSAGAAERPMTVDDVVTKT CCCCCCHHHHHHCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GITVGVIIAFAVVNFALATVNPGLALILTGVGAIGGLITVLISTFGRKYGSAAVTLTYAA CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHH FEGLFVGGISLVLSGAMVGGQNAGALIGQAVLGTIGVFLGMLYVYKTGAVKVTPKFNRIL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHH TGSLIGVLVLALGNMVLGFFGINLGLYSGGPIAIIFSLFCIGLAAMSFLQDFDIADRLIR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGAPAKNAWGVALGLAVTLVWLYTEILRLLSYFNQR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSSNPVLNSLTGTRQNYAQAGYQQQAFNPMSQYDQYGQSVTSAGAAERPMTVDDVVTKT CCCCCCHHHHHHCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GITVGVIIAFAVVNFALATVNPGLALILTGVGAIGGLITVLISTFGRKYGSAAVTLTYAA CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHH FEGLFVGGISLVLSGAMVGGQNAGALIGQAVLGTIGVFLGMLYVYKTGAVKVTPKFNRIL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHH TGSLIGVLVLALGNMVLGFFGINLGLYSGGPIAIIFSLFCIGLAAMSFLQDFDIADRLIR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGAPAKNAWGVALGLAVTLVWLYTEILRLLSYFNQR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA