| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233349
Identifier: 38233349
GI number: 38233349
Start: 718856
End: 720079
Strand: Direct
Name: 38233349
Synonym: DIP0743
Alternate gene names: NA
Gene position: 718856-720079 (Clockwise)
Preceding gene: 38233348
Following gene: 38233352
Centisome position: 28.89
GC content: 53.35
Gene sequence:
>1224_bases TTGCACAGCGCGTTTGCGCATTTAGGGGAGAGGTATTCAGGGCACTTAATTTTTTACCGCACACGTGGTTATATAGGGGA GATCGTCGTTGTTATCCACTTCCACAATCCACGTGAAGGTTCATCAAATCTTATGCGCCACCTTTGTTTTTCGCGCCTGT ATCGTCCACTATTATTCGCTGCTGCAACCACGGGTGCGGCATTTTTTGCGGGGCCGCTAGCTTACGCTGATGAGGTCCAA TCCACACCTTTGCCAGTAACACAGCCACAGCCTGCACCGACCCTGACACAAACTGTCACCTCGATGGTTAATAGCTGGGG GATTCCAACACCTGCAATCGATCCCCAGATTGCGGCGGCCGTCGATACGCTAGCTCAACAAGTTCAAGCATTCGTAGCCC CTGTCATGCCCTATGCAGATCCCCAGGTGGCTGCACCTGCCCCTGAGCGGCATGCGGTCGCGCAACGCCCCGTTGATGGT CCTAATTATCACTGGACGAACGACCCTGTTTCGCAGGTAATGGCTCAAAAACCTGGTCCAGTGCTGCACCGTGTTCAGGG TAGTTGGTTTAATGCACCAGACATTCCAGAAGAATCATTGCAGGCGCAAGCTCAGGGGGCATCTCTGTATGGCCCTGGCA CCCCGATCTACGTGGGCAAAGACCGCCTATGCACAGTAGGTGCTTCTGGCTACGATGCCGATGGGCGGAAAATCGCTATT ACGGCAGGACACTGCGGAAATGTAGGAGATGCGGTCAGCTCTGCTGATTCGTGGCAGGTAGGCCCAAGCGGCACCGTGGT AGCTAAAGGCTCTAACTTGGACTATGCAGTCGTAGAGCTTGGCTCCAATGCTCAAGTCACCCAAAATTACAACAATATCC GCGTTAATTCAGTCGGTGGCCCGATGCCTGTCACAGGTAATACAGCCTGCAAACAAGGCATTGCTACTGGGTTTAGCTGT GGATTGGTGTGGAATCATGACCACCGCACCACGGCTTCCCAAGTCTGCGCAATGCAGGGCGATTCCGGTGCACCAATGTT GGTGGGAGATCGTGTGGTTGGCATCATCAACGGTGGCATGATCCCTAATGTGAACTACCCATGCACAACCCCATGGCAGG GGCCGTTCTTTGTGCCCACTATCAGCACGAACATGGATGCAATCGTATCCGACCTCAATTCTAAGAAATCAGTCGGACAC GGTTTCCGGCTTGCTAACTCTTAA
Upstream 100 bases:
>100_bases GGCGGCCAAGCGTTGGTCACCATCGACTAATCAAACAAGGTGTACACAACACCTATGTGACACGTGCGCGCTGTGCAAAA ACTCCCTGTTTTTCAGGGGC
Downstream 100 bases:
>100_bases TAGATAGCGGGGGAGTTGTTATCGCGATGAGGTCAGCATTGTGCGGACTTCATCGTGAAGCAGCCCATTAGTAGCCAATG CGTTTCCACCATGAGGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: S1 Family Peptidase; Protease; Peptidase; Peptidase S1 And S6 Chymotrypsin/Hap; Peptidase S1 Family Protein; Serine Protease
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MHSAFAHLGERYSGHLIFYRTRGYIGEIVVVIHFHNPREGSSNLMRHLCFSRLYRPLLFAAATTGAAFFAGPLAYADEVQ STPLPVTQPQPAPTLTQTVTSMVNSWGIPTPAIDPQIAAAVDTLAQQVQAFVAPVMPYADPQVAAPAPERHAVAQRPVDG PNYHWTNDPVSQVMAQKPGPVLHRVQGSWFNAPDIPEESLQAQAQGASLYGPGTPIYVGKDRLCTVGASGYDADGRKIAI TAGHCGNVGDAVSSADSWQVGPSGTVVAKGSNLDYAVVELGSNAQVTQNYNNIRVNSVGGPMPVTGNTACKQGIATGFSC GLVWNHDHRTTASQVCAMQGDSGAPMLVGDRVVGIINGGMIPNVNYPCTTPWQGPFFVPTISTNMDAIVSDLNSKKSVGH GFRLANS
Sequences:
>Translated_407_residues MHSAFAHLGERYSGHLIFYRTRGYIGEIVVVIHFHNPREGSSNLMRHLCFSRLYRPLLFAAATTGAAFFAGPLAYADEVQ STPLPVTQPQPAPTLTQTVTSMVNSWGIPTPAIDPQIAAAVDTLAQQVQAFVAPVMPYADPQVAAPAPERHAVAQRPVDG PNYHWTNDPVSQVMAQKPGPVLHRVQGSWFNAPDIPEESLQAQAQGASLYGPGTPIYVGKDRLCTVGASGYDADGRKIAI TAGHCGNVGDAVSSADSWQVGPSGTVVAKGSNLDYAVVELGSNAQVTQNYNNIRVNSVGGPMPVTGNTACKQGIATGFSC GLVWNHDHRTTASQVCAMQGDSGAPMLVGDRVVGIINGGMIPNVNYPCTTPWQGPFFVPTISTNMDAIVSDLNSKKSVGH GFRLANS >Mature_407_residues MHSAFAHLGERYSGHLIFYRTRGYIGEIVVVIHFHNPREGSSNLMRHLCFSRLYRPLLFAAATTGAAFFAGPLAYADEVQ STPLPVTQPQPAPTLTQTVTSMVNSWGIPTPAIDPQIAAAVDTLAQQVQAFVAPVMPYADPQVAAPAPERHAVAQRPVDG PNYHWTNDPVSQVMAQKPGPVLHRVQGSWFNAPDIPEESLQAQAQGASLYGPGTPIYVGKDRLCTVGASGYDADGRKIAI TAGHCGNVGDAVSSADSWQVGPSGTVVAKGSNLDYAVVELGSNAQVTQNYNNIRVNSVGGPMPVTGNTACKQGIATGFSC GLVWNHDHRTTASQVCAMQGDSGAPMLVGDRVVGIINGGMIPNVNYPCTTPWQGPFFVPTISTNMDAIVSDLNSKKSVGH GFRLANS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43059; Mature: 43059
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSAFAHLGERYSGHLIFYRTRGYIGEIVVVIHFHNPREGSSNLMRHLCFSRLYRPLLFA CCCHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH AATTGAAFFAGPLAYADEVQSTPLPVTQPQPAPTLTQTVTSMVNSWGIPTPAIDPQIAAA HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH VDTLAQQVQAFVAPVMPYADPQVAAPAPERHAVAQRPVDGPNYHWTNDPVSQVMAQKPGP HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCH VLHRVQGSWFNAPDIPEESLQAQAQGASLYGPGTPIYVGKDRLCTVGASGYDADGRKIAI HHHHCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEECCCCEEEECCCCCCCCCCEEEE TAGHCGNVGDAVSSADSWQVGPSGTVVAKGSNLDYAVVELGSNAQVTQNYNNIRVNSVGG EECCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCCEEEECCCC PMPVTGNTACKQGIATGFSCGLVWNHDHRTTASQVCAMQGDSGAPMLVGDRVVGIINGGM CCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHEECCCCCCCEEECCEEEEEEECCC IPNVNYPCTTPWQGPFFVPTISTNMDAIVSDLNSKKSVGHGFRLANS CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHCCCCCEEECCC >Mature Secondary Structure MHSAFAHLGERYSGHLIFYRTRGYIGEIVVVIHFHNPREGSSNLMRHLCFSRLYRPLLFA CCCHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH AATTGAAFFAGPLAYADEVQSTPLPVTQPQPAPTLTQTVTSMVNSWGIPTPAIDPQIAAA HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH VDTLAQQVQAFVAPVMPYADPQVAAPAPERHAVAQRPVDGPNYHWTNDPVSQVMAQKPGP HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCH VLHRVQGSWFNAPDIPEESLQAQAQGASLYGPGTPIYVGKDRLCTVGASGYDADGRKIAI HHHHCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEECCCCEEEECCCCCCCCCCEEEE TAGHCGNVGDAVSSADSWQVGPSGTVVAKGSNLDYAVVELGSNAQVTQNYNNIRVNSVGG EECCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCCEEEECCCC PMPVTGNTACKQGIATGFSCGLVWNHDHRTTASQVCAMQGDSGAPMLVGDRVVGIINGGM CCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHEECCCCCCCEEECCEEEEEEECCC IPNVNYPCTTPWQGPFFVPTISTNMDAIVSDLNSKKSVGHGFRLANS CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA