Click here to switch to the map view.

The map label for this gene is yoqW [H]

Identifier: 38233314

GI number: 38233314

Start: 683297

End: 683959

Strand: Direct

Name: yoqW [H]

Synonym: DIP0707

Alternate gene names: 38233314

Gene position: 683297-683959 (Clockwise)

Preceding gene: 38233311

Following gene: 38233316

Centisome position: 27.46

GC content: 54.45

Gene sequence:

>663_bases
ATGTGCGGACGCTTTGTTTTGTTTACCACCGACGAGTCGCTTTTGGGACACCCAGCGCTGCGGATTTTTCACAGCATTCA
CGCGCCGAAAGGTATGCCACCGGCGCGCTATAACATCGCTCCAACCACGATCATTCCGATTCTTAGGGTGGGAACAACAC
CAACGGAGGCTGTTATTGAGCCAGCACGTTGGGGACTGATTCCTGCATGGAAGCGCGAGGTCACGTTACCACCGTTGTTT
AATGCGCGCGCAGAAACAGTGACTACCAAGCCGAGTTTTCGTCAGGCGTTTAGTACTCAGCGGTGTGCGATCCCCATGGA
TGGCTATTACGAATGGCACAACAAGAAACCATATTGGATTACTACTGGTGCACCCACATGGGTTGCCGGTCTGTGGGATA
GCGGTGCTGGCATGCTTTCAGCCACGATGATTACCACAGATTCCGTTGCGCCTTTGGACTGGCTGCATCATCGCATGCCG
AGGTTTTTAAACAACGACGAGCTTGCTGTATGGCTGCGTGGCAGCGCCGACGAGGCCAGCGGACTTCTTACTCCCGGCGA
TGCATCCGCCTTTCATACGAGCCTAGCTGACCCCAGCGTGGGAAATATCCGAAACGACTACCCAGAGCTTATCGACGCCC
CCACGGATCTATTCAGCCTGTAA

Upstream 100 bases:

>100_bases
TTGGTCATCGACTTAGACCCCGGAACCCGTACAGTTGCATGTACCGCATTGGTTGGGGTTGGTGCGTCCCACAATTGTGC
CATTCCTCCATAATAAAGGC

Downstream 100 bases:

>100_bases
ATCCGCGAAACTTCCGTCAACGACGCGAATAAGATCTTCGCCACTGAGTTCCACATCAAGACCACGTTTGCCGCCGGAAA
CAAAAATCGTGTCAAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MCGRFVLFTTDESLLGHPALRIFHSIHAPKGMPPARYNIAPTTIIPILRVGTTPTEAVIEPARWGLIPAWKREVTLPPLF
NARAETVTTKPSFRQAFSTQRCAIPMDGYYEWHNKKPYWITTGAPTWVAGLWDSGAGMLSATMITTDSVAPLDWLHHRMP
RFLNNDELAVWLRGSADEASGLLTPGDASAFHTSLADPSVGNIRNDYPELIDAPTDLFSL

Sequences:

>Translated_220_residues
MCGRFVLFTTDESLLGHPALRIFHSIHAPKGMPPARYNIAPTTIIPILRVGTTPTEAVIEPARWGLIPAWKREVTLPPLF
NARAETVTTKPSFRQAFSTQRCAIPMDGYYEWHNKKPYWITTGAPTWVAGLWDSGAGMLSATMITTDSVAPLDWLHHRMP
RFLNNDELAVWLRGSADEASGLLTPGDASAFHTSLADPSVGNIRNDYPELIDAPTDLFSL
>Mature_220_residues
MCGRFVLFTTDESLLGHPALRIFHSIHAPKGMPPARYNIAPTTIIPILRVGTTPTEAVIEPARWGLIPAWKREVTLPPLF
NARAETVTTKPSFRQAFSTQRCAIPMDGYYEWHNKKPYWITTGAPTWVAGLWDSGAGMLSATMITTDSVAPLDWLHHRMP
RFLNNDELAVWLRGSADEASGLLTPGDASAFHTSLADPSVGNIRNDYPELIDAPTDLFSL

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=234, Percent_Identity=31.1965811965812, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI54607104, Length=234, Percent_Identity=31.1965811965812, Blast_Score=86, Evalue=2e-17,
Organism=Escherichia coli, GI48994894, Length=226, Percent_Identity=30.5309734513274, Blast_Score=79, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6323761, Length=214, Percent_Identity=30.8411214953271, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355761, Length=232, Percent_Identity=31.4655172413793, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24339; Mature: 24339

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFVLFTTDESLLGHPALRIFHSIHAPKGMPPARYNIAPTTIIPILRVGTTPTEAVIE
CCCCEEEEECCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHEEHEECCCCCHHHHCC
PARWGLIPAWKREVTLPPLFNARAETVTTKPSFRQAFSTQRCAIPMDGYYEWHNKKPYWI
HHHCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCEEEECCCCCEEE
TTGAPTWVAGLWDSGAGMLSATMITTDSVAPLDWLHHRMPRFLNNDELAVWLRGSADEAS
ECCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
GLLTPGDASAFHTSLADPSVGNIRNDYPELIDAPTDLFSL
CCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHCC
>Mature Secondary Structure
MCGRFVLFTTDESLLGHPALRIFHSIHAPKGMPPARYNIAPTTIIPILRVGTTPTEAVIE
CCCCEEEEECCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHEEHEECCCCCHHHHCC
PARWGLIPAWKREVTLPPLFNARAETVTTKPSFRQAFSTQRCAIPMDGYYEWHNKKPYWI
HHHCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCEEEECCCCCEEE
TTGAPTWVAGLWDSGAGMLSATMITTDSVAPLDWLHHRMPRFLNNDELAVWLRGSADEAS
ECCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
GLLTPGDASAFHTSLADPSVGNIRNDYPELIDAPTDLFSL
CCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]