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The map label for this gene is paaE [C]

Identifier: 38233310

GI number: 38233310

Start: 678605

End: 679675

Strand: Direct

Name: paaE [C]

Synonym: DIP0703

Alternate gene names: 38233310

Gene position: 678605-679675 (Clockwise)

Preceding gene: 38233309

Following gene: 38233311

Centisome position: 27.27

GC content: 56.58

Gene sequence:

>1071_bases
ATGGCACGGACGTCGAAAGATCGTCTCTCAAAGGTGCGAAAAATCCTTGGCAGATTTACCACGCCACTTCTGCCAGATGA
TTACTCGGTGCTGATTAACCCACGCTGGTCAACACGCGAACTTCGTGGAACTATCGCAGCTGTTCGTCGAGAAGCAGACG
TTGTTCATCTTGACATCGTGCCGGGCTGGGGTGTGCCCACCCAATTTGAGCCTGGTCAATTTATCGGAATTGGTGTGGAA
GTCGATGGCAGATACATCTGGCGCAGCTATTCACTGACCTGCACACCGACAACCTCTGCCTCATTGTTATCGATCACGGT
GCGCGCGGTAGAACATGGCAAGCTCTCAAATCACTTGGTAGGCCACGCTACTCCTGGAACCACGGTGCGCTTGTCTGCCC
CTGCTGGCAGTTTTCATCTCCCCACTCCGTTGCCCCCAAAGCTTGCACTCATTGCTGCAGGAACAGGCATTACGCCGATT
ATCTCTATGCTGCGCACGATGGCTGAGCGCCAACAGTTTGCCGAAACTGACGTGGTGCTGGTGTATTCGATACGCGATCG
CGCCCATGGGTTGTTTCTTGAGGCATTAGCGCGAATGTCAACGCAACACCCGCAGCTGCGTGTGGTGGTACAAGAGACGT
CCTCGCAGGGGCGGGTGACGCCGGAGACGGTGGCGTCGATAGTTCCTGATATAACAAGCCGCACTGTGTTCGCCTGCGGC
CCGTCCACCATGCTTGATGCGTACGAGTCATGGGCGAATAAGAATCACGTTAACCTCACGACCGAGCGATTTTTGCTGGA
TCGAAAGGCCACGACAGCTCAGGGTGGCACGGTGAGCTTTGGGCAGCGTGCCAGCGTGCTTGTCGACGGCGCCACCACGG
TTCTCGAGGCAGGAGAGCAGGCGGGAGTACAACTTCCCTTCGGCTGCCGTATGGGGTTGTGCCACACCTGTGTGCGTCCG
CTGACTCATGGCCACGCAACCAACCTCGTAACCGGTGAGACTCATGAGCCGGGGTCACGTATTCGTACCTGCGTGTGCGT
AGCTGCAGGTGACATCACTATCGAAGCATAG

Upstream 100 bases:

>100_bases
TTTCTCTCCAAATGTTTGACGGAAAAACTTACGCTGACGTAACATGCATACTCACTTCGGTTACCTAACCGTAGGTTACG
TTTGGGAAGGGAAGAATGTC

Downstream 100 bases:

>100_bases
GACGGAACAATTTCATGGCAATCGACAACATTAAAGCGTATGTACACTTAAGTGACGCAGACATCGAAGAAATCGGTCGT
CGCCTAGATCAGATCAAAGC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MARTSKDRLSKVRKILGRFTTPLLPDDYSVLINPRWSTRELRGTIAAVRREADVVHLDIVPGWGVPTQFEPGQFIGIGVE
VDGRYIWRSYSLTCTPTTSASLLSITVRAVEHGKLSNHLVGHATPGTTVRLSAPAGSFHLPTPLPPKLALIAAGTGITPI
ISMLRTMAERQQFAETDVVLVYSIRDRAHGLFLEALARMSTQHPQLRVVVQETSSQGRVTPETVASIVPDITSRTVFACG
PSTMLDAYESWANKNHVNLTTERFLLDRKATTAQGGTVSFGQRASVLVDGATTVLEAGEQAGVQLPFGCRMGLCHTCVRP
LTHGHATNLVTGETHEPGSRIRTCVCVAAGDITIEA

Sequences:

>Translated_356_residues
MARTSKDRLSKVRKILGRFTTPLLPDDYSVLINPRWSTRELRGTIAAVRREADVVHLDIVPGWGVPTQFEPGQFIGIGVE
VDGRYIWRSYSLTCTPTTSASLLSITVRAVEHGKLSNHLVGHATPGTTVRLSAPAGSFHLPTPLPPKLALIAAGTGITPI
ISMLRTMAERQQFAETDVVLVYSIRDRAHGLFLEALARMSTQHPQLRVVVQETSSQGRVTPETVASIVPDITSRTVFACG
PSTMLDAYESWANKNHVNLTTERFLLDRKATTAQGGTVSFGQRASVLVDGATTVLEAGEQAGVQLPFGCRMGLCHTCVRP
LTHGHATNLVTGETHEPGSRIRTCVCVAAGDITIEA
>Mature_355_residues
ARTSKDRLSKVRKILGRFTTPLLPDDYSVLINPRWSTRELRGTIAAVRREADVVHLDIVPGWGVPTQFEPGQFIGIGVEV
DGRYIWRSYSLTCTPTTSASLLSITVRAVEHGKLSNHLVGHATPGTTVRLSAPAGSFHLPTPLPPKLALIAAGTGITPII
SMLRTMAERQQFAETDVVLVYSIRDRAHGLFLEALARMSTQHPQLRVVVQETSSQGRVTPETVASIVPDITSRTVFACGP
STMLDAYESWANKNHVNLTTERFLLDRKATTAQGGTVSFGQRASVLVDGATTVLEAGEQAGVQLPFGCRMGLCHTCVRPL
THGHATNLVTGETHEPGSRIRTCVCVAAGDITIEA

Specific function: This is an electron transfer partner for desA3 [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=297, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787098, Length=301, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1788903, Length=135, Percent_Identity=34.8148148148148, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788104, Length=254, Percent_Identity=30.3149606299213, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38464; Mature: 38332

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTSKDRLSKVRKILGRFTTPLLPDDYSVLINPRWSTRELRGTIAAVRREADVVHLDIV
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEE
PGWGVPTQFEPGQFIGIGVEVDGRYIWRSYSLTCTPTTSASLLSITVRAVEHGKLSNHLV
CCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCEEEEEEEHHHCCCCCCCEE
GHATPGTTVRLSAPAGSFHLPTPLPPKLALIAAGTGITPIISMLRTMAERQQFAETDVVL
ECCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEE
VYSIRDRAHGLFLEALARMSTQHPQLRVVVQETSSQGRVTPETVASIVPDITSRTVFACG
EEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEC
PSTMLDAYESWANKNHVNLTTERFLLDRKATTAQGGTVSFGQRASVLVDGATTVLEAGEQ
CHHHHHHHHHHCCCCCEEEEHHHHEEECCCCCCCCCCEECCCCCEEEECCHHHHHHCHHH
AGVQLPFGCRMGLCHTCVRPLTHGHATNLVTGETHEPGSRIRTCVCVAAGDITIEA
CCEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHEEEEEEEECCEEEEC
>Mature Secondary Structure 
ARTSKDRLSKVRKILGRFTTPLLPDDYSVLINPRWSTRELRGTIAAVRREADVVHLDIV
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEE
PGWGVPTQFEPGQFIGIGVEVDGRYIWRSYSLTCTPTTSASLLSITVRAVEHGKLSNHLV
CCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCEEEEEEEHHHCCCCCCCEE
GHATPGTTVRLSAPAGSFHLPTPLPPKLALIAAGTGITPIISMLRTMAERQQFAETDVVL
ECCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEE
VYSIRDRAHGLFLEALARMSTQHPQLRVVVQETSSQGRVTPETVASIVPDITSRTVFACG
EEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEC
PSTMLDAYESWANKNHVNLTTERFLLDRKATTAQGGTVSFGQRASVLVDGATTVLEAGEQ
CHHHHHHHHHHCCCCCEEEEHHHHEEECCCCCCCCCCEECCCCCEEEECCHHHHHHCHHH
AGVQLPFGCRMGLCHTCVRPLTHGHATNLVTGETHEPGSRIRTCVCVAAGDITIEA
CCEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHEEEEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]