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The map label for this gene is lpqB

Identifier: 38233303

GI number: 38233303

Start: 670885

End: 672630

Strand: Direct

Name: lpqB

Synonym: DIP0696

Alternate gene names: 38233303

Gene position: 670885-672630 (Clockwise)

Preceding gene: 38233302

Following gene: 38233304

Centisome position: 26.96

GC content: 52.75

Gene sequence:

>1746_bases
ATGCGTAACCATGTTTCGAGGTATCTCACAGCATTGATCGCTGTGGGTTGTGCCGCAACAACCGCTGCATGTACATCGTT
GCCGTCGAACTCGGAACCTCAGGCGTTACGAAGCTTCGAGGCGTCTGCGTCGGAGGAGCCTCAAGGGCCGGTAGAAGACC
AAGAGCCTGATTTGCTGCTTCGTGATTTTTACGAGGCAAATAACAATCCGCAGCAACGCTATTCGTTGGCACGTCGCTAT
TTGACGCATCGAGCGTCGCAAAGCTGGAATCCAGCGCCGGAAACGCTCGTACTCGATGGTATCGAGATCAATTCGGCGGC
GGATAGTAGCACAAAAAATAGGCGTTACGACGTCCGCGGCCTCATCGTTGGTTCCATCGGTGAGGGCGGCGAATATCGCC
CACGCAACGAGCGTTATTCCACAACGATTGGTTTGGAAAAGGTAGATGGACAGTGGCGAATTTCTACCTTGCCGGATCAA
ATTGTGGTGCAACGAAATGAGCTGTGGAACCATTACCGCCAAAAGCAGGTGTATTTCTTTGACACCTCTGGCACTACTTT
GGTGGCAGATCGTCGTTGGATTTTCCAAGAAAAAATGGGGCATAACGATAACCACGAAAGTGCGTTGTTGTCGCTTATCC
TCACGGGACCGTCGAAAAGCCTTGCTCCTGGTGTTGTCAACGAGGTGCCTTCGGGTGCTGCCTATGCGGGCTACCACGAC
GACTACTATCAGTTCACTGGGTTATCTTCGTTGGATGAAGACAGCCTCAAGCGTCTAACGGCGCAAAGCGTATGGACGCT
CGCCCTAGCCGAAGTACCAGGTCCGTATCGTTTCAAGTTCGATGGGGCTACGATGAAGTCTCCGATTAACGGCTCCGAAG
ATCTAACTGTTGATGACTTCGCCGAATACAATCCGCTGCCTCAACAAGCCGTTGATAGTGGCCTGTATGCCTTCAATTCC
AATGGCGTGAAGAAGCTCAATCAGGGGGTAGCAACCCCTACCACGGGCACGCTGGGCAATACCCATAACATCGAGTCGAT
GGCGGTGTCAGCGAAAACAGGCGCCACAGCTGCTGTGCGTACCGCAGTCGAAGGAGATGCAAAGACGTCGACGCTTATGC
TCGGCCCTATCGGCGGACAATTTGTCGATGTGCTGAAAGCTCGCAGGCTGACTTCGCCAAGTTTCGAGCTTTCTTCCTCA
TCATTGTGGGTGGTCAAGGATTCTGATCAAGTCGTGCGCCTGTCGCGGTCATCGGAAAATGAGGGCATCGTAGAAACCGT
TGTGGATACATCGGAGCTGGGTTCTTTAGGTAAAAATATTTCCGCATTGCAGCTTTCTCGAAGTGGTGTCCGCGCCGCAT
TTATTGTCGACGGAAGCGTGTACACCGCTACTGTGGCGCGACCTAACCCTGGTCAGCGAAAACTTGTCAATGTGCAAGAA
ATTATTCCATCGCTGGCGAATGTAGCTCAGTCACTCGCATGGCAGCCTAATGGCTCCTTGATCATCGGAACCTCTAAGCC
AGATGCACCAGTGTGGATCGTTGCCCAAGACGGATCGTTGGGCTCTAAGCTTTCTGCAGGCAACATTGTTGCACCTGTGA
TGAACGTGGCTGCTTCGCAGTCCACGTTGTATATCTCAGATGCGCGTGCAGCGTTGGAGTTGCCCAACTCTGATACCTCA
ACCACATATTGGCGTGAAGTCCAAGGCCTAGAAGGGAGCCGTTCAGTCTTGGTCGTGCCTCGGTAG

Upstream 100 bases:

>100_bases
GGATCTATGTTCCTGTTGACGGTCCCTCGTGTGCCTAAACGATCATTTACCGAAACCCCTATTGAGTTAGCTGCCCCAGA
GCCCCCGTTGGAGGACACCG

Downstream 100 bases:

>100_bases
CAACATCTAGGGGGGAGCATGATGGAATTGTTATTACCACGTTCGTGTGGGGGATGTGGGCGAGCTGGTGTGCGATGGTG
CCTGCGGTGCCAACGGCAGT

Product: lipoprotein LpqB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MRNHVSRYLTALIAVGCAATTAACTSLPSNSEPQALRSFEASASEEPQGPVEDQEPDLLLRDFYEANNNPQQRYSLARRY
LTHRASQSWNPAPETLVLDGIEINSAADSSTKNRRYDVRGLIVGSIGEGGEYRPRNERYSTTIGLEKVDGQWRISTLPDQ
IVVQRNELWNHYRQKQVYFFDTSGTTLVADRRWIFQEKMGHNDNHESALLSLILTGPSKSLAPGVVNEVPSGAAYAGYHD
DYYQFTGLSSLDEDSLKRLTAQSVWTLALAEVPGPYRFKFDGATMKSPINGSEDLTVDDFAEYNPLPQQAVDSGLYAFNS
NGVKKLNQGVATPTTGTLGNTHNIESMAVSAKTGATAAVRTAVEGDAKTSTLMLGPIGGQFVDVLKARRLTSPSFELSSS
SLWVVKDSDQVVRLSRSSENEGIVETVVDTSELGSLGKNISALQLSRSGVRAAFIVDGSVYTATVARPNPGQRKLVNVQE
IIPSLANVAQSLAWQPNGSLIIGTSKPDAPVWIVAQDGSLGSKLSAGNIVAPVMNVAASQSTLYISDARAALELPNSDTS
TTYWREVQGLEGSRSVLVVPR

Sequences:

>Translated_581_residues
MRNHVSRYLTALIAVGCAATTAACTSLPSNSEPQALRSFEASASEEPQGPVEDQEPDLLLRDFYEANNNPQQRYSLARRY
LTHRASQSWNPAPETLVLDGIEINSAADSSTKNRRYDVRGLIVGSIGEGGEYRPRNERYSTTIGLEKVDGQWRISTLPDQ
IVVQRNELWNHYRQKQVYFFDTSGTTLVADRRWIFQEKMGHNDNHESALLSLILTGPSKSLAPGVVNEVPSGAAYAGYHD
DYYQFTGLSSLDEDSLKRLTAQSVWTLALAEVPGPYRFKFDGATMKSPINGSEDLTVDDFAEYNPLPQQAVDSGLYAFNS
NGVKKLNQGVATPTTGTLGNTHNIESMAVSAKTGATAAVRTAVEGDAKTSTLMLGPIGGQFVDVLKARRLTSPSFELSSS
SLWVVKDSDQVVRLSRSSENEGIVETVVDTSELGSLGKNISALQLSRSGVRAAFIVDGSVYTATVARPNPGQRKLVNVQE
IIPSLANVAQSLAWQPNGSLIIGTSKPDAPVWIVAQDGSLGSKLSAGNIVAPVMNVAASQSTLYISDARAALELPNSDTS
TTYWREVQGLEGSRSVLVVPR
>Mature_581_residues
MRNHVSRYLTALIAVGCAATTAACTSLPSNSEPQALRSFEASASEEPQGPVEDQEPDLLLRDFYEANNNPQQRYSLARRY
LTHRASQSWNPAPETLVLDGIEINSAADSSTKNRRYDVRGLIVGSIGEGGEYRPRNERYSTTIGLEKVDGQWRISTLPDQ
IVVQRNELWNHYRQKQVYFFDTSGTTLVADRRWIFQEKMGHNDNHESALLSLILTGPSKSLAPGVVNEVPSGAAYAGYHD
DYYQFTGLSSLDEDSLKRLTAQSVWTLALAEVPGPYRFKFDGATMKSPINGSEDLTVDDFAEYNPLPQQAVDSGLYAFNS
NGVKKLNQGVATPTTGTLGNTHNIESMAVSAKTGATAAVRTAVEGDAKTSTLMLGPIGGQFVDVLKARRLTSPSFELSSS
SLWVVKDSDQVVRLSRSSENEGIVETVVDTSELGSLGKNISALQLSRSGVRAAFIVDGSVYTATVARPNPGQRKLVNVQE
IIPSLANVAQSLAWQPNGSLIIGTSKPDAPVWIVAQDGSLGSKLSAGNIVAPVMNVAASQSTLYISDARAALELPNSDTS
TTYWREVQGLEGSRSVLVVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpqB lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPQB_CORDI (Q6NIS1)

Other databases:

- EMBL:   BX248355
- RefSeq:   NP_939070.1
- GeneID:   2649079
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP0696
- NMPDR:   fig|257309.1.peg.661
- HOGENOM:   HBG565340
- OMA:   WREVPGL
- ProtClustDB:   PRK13616
- BioCyc:   CDIP257309:DIP0696-MONOMER
- HAMAP:   MF_01373
- InterPro:   IPR019606
- InterPro:   IPR018910
- SMART:   SM00909

Pfam domain/function: PF10646 Germane; PF10647 Gmad1

EC number: NA

Molecular weight: Translated: 62852; Mature: 62852

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNHVSRYLTALIAVGCAATTAACTSLPSNSEPQALRSFEASASEEPQGPVEDQEPDLLL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHH
RDFYEANNNPQQRYSLARRYLTHRASQSWNPAPETLVLDGIEINSAADSSTKNRRYDVRG
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEECCCCCCCCCCCEEEEEE
LIVGSIGEGGEYRPRNERYSTTIGLEKVDGQWRISTLPDQIVVQRNELWNHYRQKQVYFF
EEEECCCCCCCCCCCCCCCEEEECEEECCCCEEEECCCHHHHEEHHHHHHHHHCCEEEEE
DTSGTTLVADRRWIFQEKMGHNDNHESALLSLILTGPSKSLAPGVVNEVPSGAAYAGYHD
ECCCCEEEECCHHHHHHHCCCCCCHHHEEEEEEEECCCCCCCCCHHHHCCCCCEECCCCC
DYYQFTGLSSLDEDSLKRLTAQSVWTLALAEVPGPYRFKFDGATMKSPINGSEDLTVDDF
CCCEECCCCCCCHHHHHHHHHHHHHEEHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
AEYNPLPQQAVDSGLYAFNSNGVKKLNQGVATPTTGTLGNTHNIESMAVSAKTGATAAVR
HHCCCCCHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCHHEEEECCCCCCHHHH
TAVEGDAKTSTLMLGPIGGQFVDVLKARRLTSPSFELSSSSLWVVKDSDQVVRLSRSSEN
HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCEEEEECCCCC
EGIVETVVDTSELGSLGKNISALQLSRSGVRAAFIVDGSVYTATVARPNPGQRKLVNVQE
CCHHHHHHCHHHHHHHCCCCEEEEEECCCCEEEEEECCCEEEEEEECCCCCHHHEEEHHH
IIPSLANVAQSLAWQPNGSLIIGTSKPDAPVWIVAQDGSLGSKLSAGNIVAPVMNVAASQ
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCC
STLYISDARAALELPNSDTSTTYWREVQGLEGSRSVLVVPR
CEEEEECCCEEEECCCCCCCCHHHHHHCCCCCCCCEEEECC
>Mature Secondary Structure
MRNHVSRYLTALIAVGCAATTAACTSLPSNSEPQALRSFEASASEEPQGPVEDQEPDLLL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHH
RDFYEANNNPQQRYSLARRYLTHRASQSWNPAPETLVLDGIEINSAADSSTKNRRYDVRG
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEECCCCCCCCCCCEEEEEE
LIVGSIGEGGEYRPRNERYSTTIGLEKVDGQWRISTLPDQIVVQRNELWNHYRQKQVYFF
EEEECCCCCCCCCCCCCCCEEEECEEECCCCEEEECCCHHHHEEHHHHHHHHHCCEEEEE
DTSGTTLVADRRWIFQEKMGHNDNHESALLSLILTGPSKSLAPGVVNEVPSGAAYAGYHD
ECCCCEEEECCHHHHHHHCCCCCCHHHEEEEEEEECCCCCCCCCHHHHCCCCCEECCCCC
DYYQFTGLSSLDEDSLKRLTAQSVWTLALAEVPGPYRFKFDGATMKSPINGSEDLTVDDF
CCCEECCCCCCCHHHHHHHHHHHHHEEHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
AEYNPLPQQAVDSGLYAFNSNGVKKLNQGVATPTTGTLGNTHNIESMAVSAKTGATAAVR
HHCCCCCHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCHHEEEECCCCCCHHHH
TAVEGDAKTSTLMLGPIGGQFVDVLKARRLTSPSFELSSSSLWVVKDSDQVVRLSRSSEN
HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCEEEEECCCCC
EGIVETVVDTSELGSLGKNISALQLSRSGVRAAFIVDGSVYTATVARPNPGQRKLVNVQE
CCHHHHHHCHHHHHHHCCCCEEEEEECCCCEEEEEECCCEEEEEEECCCCCHHHEEEHHH
IIPSLANVAQSLAWQPNGSLIIGTSKPDAPVWIVAQDGSLGSKLSAGNIVAPVMNVAASQ
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCC
STLYISDARAALELPNSDTSTTYWREVQGLEGSRSVLVVPR
CEEEEECCCEEEECCCCCCCCHHHHHHCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14602910