| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is accBC [H]
Identifier: 38233256
GI number: 38233256
Start: 622563
End: 624347
Strand: Reverse
Name: accBC [H]
Synonym: DIP0649
Alternate gene names: 38233256
Gene position: 624347-622563 (Counterclockwise)
Preceding gene: 38233257
Following gene: 38233255
Centisome position: 25.09
GC content: 59.33
Gene sequence:
>1785_bases GTGTCTGTGGAACAGAAGAAGATCACTAAGGTGCTCATCGCAAACCGCGGTGAGATCGCCGTCCGCGTTATCCGTGCAGC CCGCGATGCCGGCATCGCCAGCGTCGCCGTGTACGCAGAGCCCGATGCAGACGCTCCTTTCGTCTCCATGGCTGACGAGG CATTTGCACTAGGTGGCCAAACCTCCGCCGAGTCCTACCTTGTCTTTGACAAGATCCTCGACGCGGCCAAGAAATCCGGC GCCGACGCCATCCACCCAGGCTATGGCTTCCTCTCTGAAAACGGCGACTTCGCCGAAGCAGTTATCAATGCAGGCCTGAT CTGGATCGGCCCATCGCCGCAGTCCATCCGCGACCTCGGCGACAAAGTCACTGCACGCCACATCGCGCTTAAAGCCGAAG CACCTATGGCACCAGGCACCAAAGAGCCAGTCAAAGACGCCTCCGAGGTCGTCGCCTTCGCAGAAGAGCACGGACTTCCC ATCGCTATTAAGGCAGCATTCGGCGGCGGCGGACGCGGCATGAAAGTTGCCTACACCATGGATGAAGTAGCCGACCTCTA CGAATCCGCAACCCGCGAGGCAGTGGCAGCCTTCGGTCGCGGCGAATGCTTCGTCGAGCGTTACCTCGACAAAGCACGCC ACGTCGAGTGCCAAGTCATCGCAGATATGCACGGCAACGTTGTTGTCGCAGGCACCCGCGACTGCTCCCTCCAGCGCCGA TTCCAAAAGCTCGTCGAAGAAGCACCAGCCCCATTCCTTACCGACGACCAGCGCACCCGCCTTCACGAATCCGCCAAAGC CATCTGTAAAGAAGCTGGTTACTACGGTGCCGGCACCGTAGAGTACCTCGTCGGCTCCGACGGACTGATCTCCTTCCTTG AGGTCAACACCCGCCTCCAGGTGGAACACCCCGTCACCGAGGTCACCACCGGCCTCGACTTGGTACGCGAGCAATTCCGC ATCGCAGAAGGCAAAGAACTCCACATCAAACAAGACCCAACCCCTCGTGGACACGCCTTCGAATTCCGAATCAACGGCGA AGACGCAGGCTCAAACTTCATGCCCGCACCAGGCAAGGTCACCAAGTACATCGAGCCTTCCGGCCCAGGTGTACGCATGG ACTCCGGTATCGTCGAAGGCTCCGTCATCGGCGGCCAATTCGACTCCATGCTCGCCAAGCTCATCGTCTTCGGAGAAACC CGTGACGAAGCACTCCAACGCGCATCCCGCGCTCTTAATGAGTACGTCGTCGAAGGCATGCCCACCGTCTTGCCATTCCA CCGCCACATCGTGGAAAACCCAGCCTTCATCGGCGACGGCGAAAAATTCGAGGTCTACACCAAGTGGATCGAAGAAGAGT GGAACAACCCGATCGAGCCATACGTCGACCCAACAGATGTGGATGATGAAGAAGCAGCACTGCCATCCCAGAAAGTTGTC GTGGAAATCGACGGCCGCCGCGTAGAAATCGCACTACCAGGCGACCTCGCACTCGGCGGCGGCGCAGGTGCACCAAAGAA GAAAGCCAAGAAGCGCCGCGCAGGTGGCTCCAAGGCTGCCATCTCTGGCGACGCTGTTGCAGCACCAATGCAGGGCACCG TCATCAAGATCAACGCCGAAGAAGGCGCCGAAGTAGCTGAAGGCGACACCGTCGTCGTCCTCGAAGCAATGAAGATGGAA AACCCCGTCAAGGCACACAAGTCCGGTGTGGTCACCGGTCTAGCCATCGCCGCTGGCGAAGGCGTAACCAAGGGCCAAGT ACTCCTCGAGATCAAAGACGCCTAA
Upstream 100 bases:
>100_bases GACTGACAATGGTGTAGCAACCTATAGCGAGATGTCATGCCACGCCCCTAGAATTGCTACACCAGCCCCAAAAATTTTCA TCAGAACCAGGAGAGCTTCA
Downstream 100 bases:
>100_bases ACGCCCTTAAAAAGACTCAGGCTCGTCACCTCGCTGGCTTACTGCCTTACTGCGCTGAAATTACGAGCCTGACGTCACCC CACCTGGGCCTTCCCGCAGG
Product: acyl coenzyme A carboxylase
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MSVEQKKITKVLIANRGEIAVRVIRAARDAGIASVAVYAEPDADAPFVSMADEAFALGGQTSAESYLVFDKILDAAKKSG ADAIHPGYGFLSENGDFAEAVINAGLIWIGPSPQSIRDLGDKVTARHIALKAEAPMAPGTKEPVKDASEVVAFAEEHGLP IAIKAAFGGGGRGMKVAYTMDEVADLYESATREAVAAFGRGECFVERYLDKARHVECQVIADMHGNVVVAGTRDCSLQRR FQKLVEEAPAPFLTDDQRTRLHESAKAICKEAGYYGAGTVEYLVGSDGLISFLEVNTRLQVEHPVTEVTTGLDLVREQFR IAEGKELHIKQDPTPRGHAFEFRINGEDAGSNFMPAPGKVTKYIEPSGPGVRMDSGIVEGSVIGGQFDSMLAKLIVFGET RDEALQRASRALNEYVVEGMPTVLPFHRHIVENPAFIGDGEKFEVYTKWIEEEWNNPIEPYVDPTDVDDEEAALPSQKVV VEIDGRRVEIALPGDLALGGGAGAPKKKAKKRRAGGSKAAISGDAVAAPMQGTVIKINAEEGAEVAEGDTVVVLEAMKME NPVKAHKSGVVTGLAIAAGEGVTKGQVLLEIKDA
Sequences:
>Translated_594_residues MSVEQKKITKVLIANRGEIAVRVIRAARDAGIASVAVYAEPDADAPFVSMADEAFALGGQTSAESYLVFDKILDAAKKSG ADAIHPGYGFLSENGDFAEAVINAGLIWIGPSPQSIRDLGDKVTARHIALKAEAPMAPGTKEPVKDASEVVAFAEEHGLP IAIKAAFGGGGRGMKVAYTMDEVADLYESATREAVAAFGRGECFVERYLDKARHVECQVIADMHGNVVVAGTRDCSLQRR FQKLVEEAPAPFLTDDQRTRLHESAKAICKEAGYYGAGTVEYLVGSDGLISFLEVNTRLQVEHPVTEVTTGLDLVREQFR IAEGKELHIKQDPTPRGHAFEFRINGEDAGSNFMPAPGKVTKYIEPSGPGVRMDSGIVEGSVIGGQFDSMLAKLIVFGET RDEALQRASRALNEYVVEGMPTVLPFHRHIVENPAFIGDGEKFEVYTKWIEEEWNNPIEPYVDPTDVDDEEAALPSQKVV VEIDGRRVEIALPGDLALGGGAGAPKKKAKKRRAGGSKAAISGDAVAAPMQGTVIKINAEEGAEVAEGDTVVVLEAMKME NPVKAHKSGVVTGLAIAAGEGVTKGQVLLEIKDA >Mature_593_residues SVEQKKITKVLIANRGEIAVRVIRAARDAGIASVAVYAEPDADAPFVSMADEAFALGGQTSAESYLVFDKILDAAKKSGA DAIHPGYGFLSENGDFAEAVINAGLIWIGPSPQSIRDLGDKVTARHIALKAEAPMAPGTKEPVKDASEVVAFAEEHGLPI AIKAAFGGGGRGMKVAYTMDEVADLYESATREAVAAFGRGECFVERYLDKARHVECQVIADMHGNVVVAGTRDCSLQRRF QKLVEEAPAPFLTDDQRTRLHESAKAICKEAGYYGAGTVEYLVGSDGLISFLEVNTRLQVEHPVTEVTTGLDLVREQFRI AEGKELHIKQDPTPRGHAFEFRINGEDAGSNFMPAPGKVTKYIEPSGPGVRMDSGIVEGSVIGGQFDSMLAKLIVFGETR DEALQRASRALNEYVVEGMPTVLPFHRHIVENPAFIGDGEKFEVYTKWIEEEWNNPIEPYVDPTDVDDEEAALPSQKVVV EIDGRRVEIALPGDLALGGGAGAPKKKAKKRRAGGSKAAISGDAVAAPMQGTVIKINAEEGAEVAEGDTVVVLEAMKMEN PVKAHKSGVVTGLAIAAGEGVTKGQVLLEIKDA
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI295821183, Length=642, Percent_Identity=38.006230529595, Blast_Score=389, Evalue=1e-108, Organism=Homo sapiens, GI65506442, Length=679, Percent_Identity=36.3770250368188, Blast_Score=377, Evalue=1e-104, Organism=Homo sapiens, GI189095269, Length=677, Percent_Identity=36.4844903988183, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI116805327, Length=447, Percent_Identity=44.0715883668904, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI106049528, Length=457, Percent_Identity=43.3260393873085, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI106049295, Length=457, Percent_Identity=43.3260393873085, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI106049292, Length=457, Percent_Identity=43.3260393873085, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI38679977, Length=496, Percent_Identity=32.0564516129032, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI38679967, Length=496, Percent_Identity=32.0564516129032, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI38679974, Length=496, Percent_Identity=32.0564516129032, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI38679971, Length=496, Percent_Identity=32.0564516129032, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI38679960, Length=496, Percent_Identity=32.0564516129032, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI134142062, Length=509, Percent_Identity=30.6483300589391, Blast_Score=206, Evalue=5e-53, Organism=Escherichia coli, GI1789654, Length=443, Percent_Identity=46.0496613995485, Blast_Score=358, Evalue=1e-100, Organism=Caenorhabditis elegans, GI71987519, Length=661, Percent_Identity=37.2163388804841, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17567343, Length=452, Percent_Identity=43.8053097345133, Blast_Score=368, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17562816, Length=441, Percent_Identity=43.5374149659864, Blast_Score=348, Evalue=6e-96, Organism=Caenorhabditis elegans, GI133931226, Length=466, Percent_Identity=28.9699570815451, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71997163, Length=514, Percent_Identity=27.0428015564202, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI71997168, Length=514, Percent_Identity=27.0428015564202, Blast_Score=179, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6319695, Length=437, Percent_Identity=45.5377574370709, Blast_Score=358, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6321376, Length=437, Percent_Identity=45.9954233409611, Blast_Score=350, Evalue=3e-97, Organism=Saccharomyces cerevisiae, GI6319685, Length=428, Percent_Identity=41.3551401869159, Blast_Score=317, Evalue=4e-87, Organism=Saccharomyces cerevisiae, GI6323863, Length=477, Percent_Identity=29.3501048218029, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6324343, Length=514, Percent_Identity=29.3774319066148, Blast_Score=201, Evalue=4e-52, Organism=Drosophila melanogaster, GI24651757, Length=474, Percent_Identity=42.8270042194093, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652212, Length=441, Percent_Identity=45.3514739229025, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24652210, Length=441, Percent_Identity=45.3514739229025, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24652214, Length=441, Percent_Identity=45.3514739229025, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI19921944, Length=441, Percent_Identity=45.3514739229025, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24652216, Length=441, Percent_Identity=45.3514739229025, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI281363050, Length=441, Percent_Identity=45.3514739229025, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24652224, Length=441, Percent_Identity=45.3514739229025, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24652222, Length=441, Percent_Identity=45.3514739229025, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24652220, Length=441, Percent_Identity=45.3514739229025, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24652218, Length=441, Percent_Identity=45.3514739229025, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24651759, Length=430, Percent_Identity=42.093023255814, Blast_Score=319, Evalue=4e-87, Organism=Drosophila melanogaster, GI161076409, Length=503, Percent_Identity=30.4174950298211, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24586458, Length=503, Percent_Identity=30.4174950298211, Blast_Score=199, Evalue=5e-51, Organism=Drosophila melanogaster, GI161076407, Length=503, Percent_Identity=30.4174950298211, Blast_Score=199, Evalue=5e-51, Organism=Drosophila melanogaster, GI24586460, Length=503, Percent_Identity=30.4174950298211, Blast_Score=199, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 63476; Mature: 63344
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEQKKITKVLIANRGEIAVRVIRAARDAGIASVAVYAEPDADAPFVSMADEAFALGGQ CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCHHHCCCCC TSAESYLVFDKILDAAKKSGADAIHPGYGFLSENGDFAEAVINAGLIWIGPSPQSIRDLG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHCCEEEECCCCHHHHHHH DKVTARHIALKAEAPMAPGTKEPVKDASEVVAFAEEHGLPIAIKAAFGGGGRGMKVAYTM HHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEH DEVADLYESATREAVAAFGRGECFVERYLDKARHVECQVIADMHGNVVVAGTRDCSLQRR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCHHHHH FQKLVEEAPAPFLTDDQRTRLHESAKAICKEAGYYGAGTVEYLVGSDGLISFLEVNTRLQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCEEE VEHPVTEVTTGLDLVREQFRIAEGKELHIKQDPTPRGHAFEFRINGEDAGSNFMPAPGKV ECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCE TKYIEPSGPGVRMDSGIVEGSVIGGQFDSMLAKLIVFGETRDEALQRASRALNEYVVEGM EEEECCCCCCEEECCCCEECEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PTVLPFHRHIVENPAFIGDGEKFEVYTKWIEEEWNNPIEPYVDPTDVDDEEAALPSQKVV CHHHHHHHHHHCCCCEECCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCEEE VEIDGRRVEIALPGDLALGGGAGAPKKKAKKRRAGGSKAAISGDAVAAPMQGTVIKINAE EEECCCEEEEEECCCEEECCCCCCCHHHHHHHHCCCCCEEECCCCEECCCCCEEEEEECC EGAEVAEGDTVVVLEAMKMENPVKAHKSGVVTGLAIAAGEGVTKGQVLLEIKDA CCCCCCCCCEEEEEEEHHCCCCHHHHHCCCEEEEEEECCCCCCCCEEEEEEECC >Mature Secondary Structure SVEQKKITKVLIANRGEIAVRVIRAARDAGIASVAVYAEPDADAPFVSMADEAFALGGQ CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCHHHCCCCC TSAESYLVFDKILDAAKKSGADAIHPGYGFLSENGDFAEAVINAGLIWIGPSPQSIRDLG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHCCEEEECCCCHHHHHHH DKVTARHIALKAEAPMAPGTKEPVKDASEVVAFAEEHGLPIAIKAAFGGGGRGMKVAYTM HHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEH DEVADLYESATREAVAAFGRGECFVERYLDKARHVECQVIADMHGNVVVAGTRDCSLQRR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCHHHHH FQKLVEEAPAPFLTDDQRTRLHESAKAICKEAGYYGAGTVEYLVGSDGLISFLEVNTRLQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCEEE VEHPVTEVTTGLDLVREQFRIAEGKELHIKQDPTPRGHAFEFRINGEDAGSNFMPAPGKV ECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCE TKYIEPSGPGVRMDSGIVEGSVIGGQFDSMLAKLIVFGETRDEALQRASRALNEYVVEGM EEEECCCCCCEEECCCCEECEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PTVLPFHRHIVENPAFIGDGEKFEVYTKWIEEEWNNPIEPYVDPTDVDDEEAALPSQKVV CHHHHHHHHHHCCCCEECCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCEEE VEIDGRRVEIALPGDLALGGGAGAPKKKAKKRRAGGSKAAISGDAVAAPMQGTVIKINAE EEECCCEEEEEECCCEEECCCCCCCHHHHHHHHCCCCCEEECCCCEECCCCCEEEEEECC EGAEVAEGDTVVVLEAMKMENPVKAHKSGVVTGLAIAAGEGVTKGQVLLEIKDA CCCCCCCCCEEEEEEEHHCCCCHHHHHCCCEEEEEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7909542; 11234002 [H]