| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is guaB [H]
Identifier: 38233189
GI number: 38233189
Start: 547582
End: 549102
Strand: Direct
Name: guaB [H]
Synonym: DIP0580
Alternate gene names: 38233189
Gene position: 547582-549102 (Clockwise)
Preceding gene: 38233187
Following gene: 38233190
Centisome position: 22.0
GC content: 57.26
Gene sequence:
>1521_bases ATGACGCAGCAGCGCGTTTCCACTGGTGGCGACGACCCCAATAAGGTAGCCCTCGTGGGATTGACTTTCGATGACGTACT TCTACTTCCGGACGCTTCTGAGGTAATCCCAAGCGAGGTGTCCACCTCCACTCAGCTGACCCGAAATATCTCCTTGAACA TCCCAGTTGTTTCCGCAGCTATGGACACCGTGACTGAATCTCGCATGGCCATCGCCATGGCGCGCGAAGGTGGCATGGGT ATCTTGCACCGTAACCTCTCCATTGAGGAGCAGGCTGCTCACGTTGAGACGGTCAAGCGCTCTGAGTCTGGAATGGTCAC TGACCCAGTAACCTGTAGCCCAGACATGAGCATCTCCGAAGTAGATGCGCTGTGCGCACGCTTTCGCATTTCTGGTATTC CGGTTGTGGATTCTGAAGGAAAACTTCTCGGTATTTGTACCAACCGCGACATGCGCTTTGAGCAGAACTTCGACCGCAAG GTTTCTGAAGTTATGACTCCTATGCCCTTGGTCGTCGCTGAGGAAGGCGTGACCAAGGAACAAGCACTCAGTCTTCTGAG TACCAACAAGGTTGAGAAGCTGCCTATCGTCGATAAGCAAGGCAAACTCGTCGGTCTGATCACGGTGAAAGACTTCGTCA AGACCGAGCAGTACCCGAACGCCTCCAAGGACGCTACTGGCCGCCTCTTGGTTGGCGCAGGCATTGGTGTCGGCGAAGAA TCGTGGACTCGTGCCGGATCGCTTGTCGACGCCGGCGTGGACGTTCTCGTCGTCGATTCCGCGCACGCACATTCCAAGGG CGTGCTGGACATGGTTTCGCGCGTCAAGCAAGAATGGGGCGATCGTGTCGACGTAATCGGTGGTAACCTCGCAACCCGTT CCGCAGCCAAGGCCATGATCGAAGCCGGCGCTGACGCCATCAAGGTTGGCATTGGCCCAGGCTCCATCTGCACCACCCGC GTCGTAGCAGGTGTTGGTGCACCACAGATCACCGCCATCATGGAGGCCTCCGTTCCCGCACACGCAGCAGGTGTACCGAT CATCGCTGACGGTGGTATGCAGTTCTCCGGCGATATCGCCAAGGCCCTCGCCGCCGGTGCATCCACCGTCATGCTCGGCT CCATGCTGGCTGGTACCGCAGAGGCCCCAGGCGACATCGTGGTTGTCGGTGGCAAGCAGTACAAGCGCTACCGTGGCATG GGATCCATGGGTGCTATGCAAGGCCGCGGCCTATCTGGTGAGAAGCGTTCCTATTCCAAGGATCGCTACTTCCAAGCAGA CGTAAGGAGCGAAGACAAGCTGGTTCCGGAAGGAATCGAAGGCCGCGTACCATTCCGTGGCTCCATCGACGCCATCACCC ATCAACTCGTCGGCGGCCTGCGCGCTGCCATGGGATACACCGGTTCGGCTACGATTAATGACTTGTGGAACGCACGCTTC GTTCAAATCACCTCTGCTGGTTTGAAGGAATCACATCCTCACCACATTCAGCAGACCGTCGAAGCACCTAACTACCACTA A
Upstream 100 bases:
>100_bases AACTTATTCTCCAATTATGCGTATAGGGGCTAATCTAGGAACATCGTGTACACGCGATAACCTAAGGCAGCCCAAAACGT ATTTTCTCAGGAGTAAATGC
Downstream 100 bases:
>100_bases ACCGGAAAAACTGAAAGGTCTTCTTTCATGCGTGATTACGTCGAAATTGGAATGGGTCGCGAGGCCCGCCGTACCTACCA CCTCGACAGCGTTGCTATCG
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MTQQRVSTGGDDPNKVALVGLTFDDVLLLPDASEVIPSEVSTSTQLTRNISLNIPVVSAAMDTVTESRMAIAMAREGGMG ILHRNLSIEEQAAHVETVKRSESGMVTDPVTCSPDMSISEVDALCARFRISGIPVVDSEGKLLGICTNRDMRFEQNFDRK VSEVMTPMPLVVAEEGVTKEQALSLLSTNKVEKLPIVDKQGKLVGLITVKDFVKTEQYPNASKDATGRLLVGAGIGVGEE SWTRAGSLVDAGVDVLVVDSAHAHSKGVLDMVSRVKQEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTR VVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDIAKALAAGASTVMLGSMLAGTAEAPGDIVVVGGKQYKRYRGM GSMGAMQGRGLSGEKRSYSKDRYFQADVRSEDKLVPEGIEGRVPFRGSIDAITHQLVGGLRAAMGYTGSATINDLWNARF VQITSAGLKESHPHHIQQTVEAPNYH
Sequences:
>Translated_506_residues MTQQRVSTGGDDPNKVALVGLTFDDVLLLPDASEVIPSEVSTSTQLTRNISLNIPVVSAAMDTVTESRMAIAMAREGGMG ILHRNLSIEEQAAHVETVKRSESGMVTDPVTCSPDMSISEVDALCARFRISGIPVVDSEGKLLGICTNRDMRFEQNFDRK VSEVMTPMPLVVAEEGVTKEQALSLLSTNKVEKLPIVDKQGKLVGLITVKDFVKTEQYPNASKDATGRLLVGAGIGVGEE SWTRAGSLVDAGVDVLVVDSAHAHSKGVLDMVSRVKQEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTR VVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDIAKALAAGASTVMLGSMLAGTAEAPGDIVVVGGKQYKRYRGM GSMGAMQGRGLSGEKRSYSKDRYFQADVRSEDKLVPEGIEGRVPFRGSIDAITHQLVGGLRAAMGYTGSATINDLWNARF VQITSAGLKESHPHHIQQTVEAPNYH >Mature_505_residues TQQRVSTGGDDPNKVALVGLTFDDVLLLPDASEVIPSEVSTSTQLTRNISLNIPVVSAAMDTVTESRMAIAMAREGGMGI LHRNLSIEEQAAHVETVKRSESGMVTDPVTCSPDMSISEVDALCARFRISGIPVVDSEGKLLGICTNRDMRFEQNFDRKV SEVMTPMPLVVAEEGVTKEQALSLLSTNKVEKLPIVDKQGKLVGLITVKDFVKTEQYPNASKDATGRLLVGAGIGVGEES WTRAGSLVDAGVDVLVVDSAHAHSKGVLDMVSRVKQEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRV VAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDIAKALAAGASTVMLGSMLAGTAEAPGDIVVVGGKQYKRYRGMG SMGAMQGRGLSGEKRSYSKDRYFQADVRSEDKLVPEGIEGRVPFRGSIDAITHQLVGGLRAAMGYTGSATINDLWNARFV QITSAGLKESHPHHIQQTVEAPNYH
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=468, Percent_Identity=42.9487179487179, Blast_Score=339, Evalue=3e-93, Organism=Homo sapiens, GI34328928, Length=468, Percent_Identity=42.9487179487179, Blast_Score=338, Evalue=5e-93, Organism=Homo sapiens, GI34328930, Length=468, Percent_Identity=42.9487179487179, Blast_Score=338, Evalue=6e-93, Organism=Homo sapiens, GI156616279, Length=468, Percent_Identity=42.9487179487179, Blast_Score=338, Evalue=6e-93, Organism=Homo sapiens, GI66933016, Length=479, Percent_Identity=41.9624217118998, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI217035152, Length=463, Percent_Identity=42.7645788336933, Blast_Score=330, Evalue=1e-90, Organism=Homo sapiens, GI217035148, Length=468, Percent_Identity=42.3076923076923, Blast_Score=329, Evalue=4e-90, Organism=Homo sapiens, GI217035150, Length=469, Percent_Identity=40.9381663113006, Blast_Score=306, Evalue=4e-83, Organism=Homo sapiens, GI50541954, Length=277, Percent_Identity=34.2960288808664, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI50541952, Length=277, Percent_Identity=34.2960288808664, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI50541948, Length=277, Percent_Identity=34.2960288808664, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI50541956, Length=277, Percent_Identity=34.2960288808664, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI156104880, Length=253, Percent_Identity=34.3873517786561, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1788855, Length=493, Percent_Identity=53.5496957403651, Blast_Score=465, Evalue=1e-132, Organism=Escherichia coli, GI1786293, Length=256, Percent_Identity=33.984375, Blast_Score=147, Evalue=1e-36, Organism=Caenorhabditis elegans, GI71994385, Length=479, Percent_Identity=35.9081419624217, Blast_Score=266, Evalue=2e-71, Organism=Caenorhabditis elegans, GI71994389, Length=432, Percent_Identity=37.5, Blast_Score=258, Evalue=7e-69, Organism=Caenorhabditis elegans, GI17560440, Length=289, Percent_Identity=32.5259515570934, Blast_Score=153, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6323585, Length=460, Percent_Identity=42.8260869565217, Blast_Score=339, Evalue=7e-94, Organism=Saccharomyces cerevisiae, GI6323464, Length=454, Percent_Identity=43.6123348017621, Blast_Score=333, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6322012, Length=488, Percent_Identity=40.5737704918033, Blast_Score=332, Evalue=7e-92, Organism=Saccharomyces cerevisiae, GI6319352, Length=339, Percent_Identity=40.117994100295, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6319353, Length=103, Percent_Identity=47.5728155339806, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24641071, Length=486, Percent_Identity=40.7407407407407, Blast_Score=334, Evalue=1e-91, Organism=Drosophila melanogaster, GI24641073, Length=486, Percent_Identity=40.7407407407407, Blast_Score=334, Evalue=1e-91, Organism=Drosophila melanogaster, GI28571163, Length=445, Percent_Identity=40.8988764044944, Blast_Score=301, Evalue=8e-82,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 53321; Mature: 53189
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQRVSTGGDDPNKVALVGLTFDDVLLLPDASEVIPSEVSTSTQLTRNISLNIPVVSAA CCCCCCCCCCCCCCCEEEEEEECCCEEECCCCHHHCCCHHCCCHHEEEEEEECCCHHHHH MDTVTESRMAIAMAREGGMGILHRNLSIEEQAAHVETVKRSESGMVTDPVTCSPDMSISE HHHHHHHHHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHH VDALCARFRISGIPVVDSEGKLLGICTNRDMRFEQNFDRKVSEVMTPMPLVVAEEGVTKE HHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHH QALSLLSTNKVEKLPIVDKQGKLVGLITVKDFVKTEQYPNASKDATGRLLVGAGIGVGEE HHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCEEEEECCCCCCCH SWTRAGSLVDAGVDVLVVDSAHAHSKGVLDMVSRVKQEWGDRVDVIGGNLATRSAAKAMI HHHHCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHH EAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDIA HCCCCEEEEECCCCCHHHHHHHHCCCCCCEEHEEECCCCCHHCCCCEEECCCCEECCHHH KALAAGASTVMLGSMLAGTAEAPGDIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSK HHHHCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DRYFQADVRSEDKLVPEGIEGRVPFRGSIDAITHQLVGGLRAAMGYTGSATINDLWNARF CCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEE VQITSAGLKESHPHHIQQTVEAPNYH EEEECCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure TQQRVSTGGDDPNKVALVGLTFDDVLLLPDASEVIPSEVSTSTQLTRNISLNIPVVSAA CCCCCCCCCCCCCCEEEEEEECCCEEECCCCHHHCCCHHCCCHHEEEEEEECCCHHHHH MDTVTESRMAIAMAREGGMGILHRNLSIEEQAAHVETVKRSESGMVTDPVTCSPDMSISE HHHHHHHHHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHH VDALCARFRISGIPVVDSEGKLLGICTNRDMRFEQNFDRKVSEVMTPMPLVVAEEGVTKE HHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHH QALSLLSTNKVEKLPIVDKQGKLVGLITVKDFVKTEQYPNASKDATGRLLVGAGIGVGEE HHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCEEEEECCCCCCCH SWTRAGSLVDAGVDVLVVDSAHAHSKGVLDMVSRVKQEWGDRVDVIGGNLATRSAAKAMI HHHHCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHH EAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDIA HCCCCEEEEECCCCCHHHHHHHHCCCCCCEEHEEECCCCCHHCCCCEEECCCCEECCHHH KALAAGASTVMLGSMLAGTAEAPGDIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSK HHHHCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DRYFQADVRSEDKLVPEGIEGRVPFRGSIDAITHQLVGGLRAAMGYTGSATINDLWNARF CCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEE VQITSAGLKESHPHHIQQTVEAPNYH EEEECCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]