Click here to switch to the map view.

The map label for this gene is dppC [H]

Identifier: 38232946

GI number: 38232946

Start: 290085

End: 291839

Strand: Direct

Name: dppC [H]

Synonym: DIP0325

Alternate gene names: 38232946

Gene position: 290085-291839 (Clockwise)

Preceding gene: 38232945

Following gene: 38232948

Centisome position: 11.66

GC content: 61.25

Gene sequence:

>1755_bases
ATGAGATCGCCTCGCACCCTCGCCACGGTTATTATCGCTGTGGCAACCTATGCGCTCGCTTTGGTAGCCACCGCACTATT
GCCCTGGTTTACCGGCCGCGAACCCGCTTTCGCTGTTCTTCGAGCCCGTGAGCGCGAACGCGAGGCGACTCCTGAACTTC
TTCAGGCCATCCGTGAGCAACTTGATCTCCCACGCACCCCGTGGGAATCAGTATCCCGCTGGTTTGCGGGAGTCGCCCGC
GGTGACTTTGGCACCTCCTGGGTCAACCCCGCACAAGGTGCATGGGCCCAAGCCACACACGGCTTAGGGATCACCGCCAC
GCTGACCTTTGTCTCCACTGTTTTGTGTCTGATCGTGGCGTTGCTTATCGTGATGCCCCGAATCGCAGCCGCTGCCCGCG
GACGACGTGGGGGAGTAGCAGCCCCCCAGCTTTTAGCAGCCCTAGCAGCGCTTCCTGACTTTGTGGTGGCCGTGATCTTG
TTGTGGCTGTGTGCCCTAGTGCTGCACATCCTGCCAGTGGGCGGGTGGTCCTCGCCCGCACACATGGTGCTGCCCTCCCT
AGCATTGGGAGTATGCGCCGGTGGCGTGTACGGCAGAGTACTGCTCATCACCGCAGATTCTGCCTCCCAAGAACCGTGGG
TAGAGGCATGGCGTATCAATGGCGTTGCGCACAGTCGGATCACCCGCGCACTGCTGTGGCGTAGTTTTGTCCCCACGATT
CCACTGCTCACACTCTTTTTTGCTGGCACCCTTGCCAGCACTGCGGCAGTAGAAGTGACCTTTAACATCCCAGGATTCGG
GCGCACTGTTGTCAATTCTGCCTTGAATGCGGATCTGCCAGTGCTGCAGGCGGCAGTATTTGTGGTGCTTGTGGTGGGCG
CGTTAAGCGGAATTGTGGCAAATACGCTGCGCCGAATCATTCTGCGTCGCCTCGAAGGCGATGTGGCGGGCGTGTCGCTG
AGCACCGGCACGACGGCCACCAGCGTGGTGTTTGACCGCGTGAGCCTCATTATTGCGGCGATCCCACTGGTTGCTGTTGC
CGCAGGCATGATCCGCAGCGCAGCGATCAACACCGATGACCGCTTTGCCAGCTATTCGGCAGCGCACCCCTTGGGTGCCG
ACCAGCTAGGCCGTGACATCTGGGCACGGCTTGCCGACGGCTTCACGTACTCCATCGGCGTGGCCGTCCTCGTAACCGCG
CTTTGTGCCCTCATCGGCCTGATCGCAGGACATTTAGGCAGCTGGGTGCTCCACATCGGCGACGCCCTCAATGCCTTCCC
AGCGGTCCTCCTCGGCCTCATTCTTGCCGGTGCCCTAGGGCCTTCTACCACCACAGCTGCGATCGCCGTTCTGATGGTGG
GCTGGATCCCGCTGGCCTCCCACTGCGCAGCGGTTGTTCAAGAAGCCCGCGCTAGTGGACACTACCGCTACGCAGCAACC
ATGGGTGCAAGCCGATGGCACCTGCTGCGCCACCATGTGCTGCCATGGACCACCCCCGCCGTTATCCGGCACGCTGTGGT
GCGCATTGCCCACAATGCTATCTCCCTAGCCGCGTTGGGTTACCTTGGTGTCGGAGCAAGCGTTGGCAGCCCCGATTGGG
GAGTGATCTTGGAAGAATCCACCCACTACCTTGAACGTGCCCCGTGGATGGCCATTGGTCCGATGTTGTGCTTGGTGGCC
CTAGGGGTTGTGGCTGCGGTGACTACGGACAGCGTGGGGCGTCGAGAAGCGTCTAGTTATCACCAGCCTGAATAA

Upstream 100 bases:

>100_bases
GCTTGTGGTGTCCAAGGACGTGGAAGGCATTGCTGCCGACCCAATGGAACGCTCCCTGATCACCGAAAAGACCAAGAAGA
CCGCTAAGAAGTAAATGACC

Downstream 100 bases:

>100_bases
TGTTGCGCAACATGGTGGGAAATATCACGGCATGGAAAGGAATAAGCGCTAGCCAGTACACTCTGCCAAGCAGTCCTTTG
GGGAAATAAACCGCCCGCTG

Product: putative transport system membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MRSPRTLATVIIAVATYALALVATALLPWFTGREPAFAVLRAREREREATPELLQAIREQLDLPRTPWESVSRWFAGVAR
GDFGTSWVNPAQGAWAQATHGLGITATLTFVSTVLCLIVALLIVMPRIAAAARGRRGGVAAPQLLAALAALPDFVVAVIL
LWLCALVLHILPVGGWSSPAHMVLPSLALGVCAGGVYGRVLLITADSASQEPWVEAWRINGVAHSRITRALLWRSFVPTI
PLLTLFFAGTLASTAAVEVTFNIPGFGRTVVNSALNADLPVLQAAVFVVLVVGALSGIVANTLRRIILRRLEGDVAGVSL
STGTTATSVVFDRVSLIIAAIPLVAVAAGMIRSAAINTDDRFASYSAAHPLGADQLGRDIWARLADGFTYSIGVAVLVTA
LCALIGLIAGHLGSWVLHIGDALNAFPAVLLGLILAGALGPSTTTAAIAVLMVGWIPLASHCAAVVQEARASGHYRYAAT
MGASRWHLLRHHVLPWTTPAVIRHAVVRIAHNAISLAALGYLGVGASVGSPDWGVILEESTHYLERAPWMAIGPMLCLVA
LGVVAAVTTDSVGRREASSYHQPE

Sequences:

>Translated_584_residues
MRSPRTLATVIIAVATYALALVATALLPWFTGREPAFAVLRAREREREATPELLQAIREQLDLPRTPWESVSRWFAGVAR
GDFGTSWVNPAQGAWAQATHGLGITATLTFVSTVLCLIVALLIVMPRIAAAARGRRGGVAAPQLLAALAALPDFVVAVIL
LWLCALVLHILPVGGWSSPAHMVLPSLALGVCAGGVYGRVLLITADSASQEPWVEAWRINGVAHSRITRALLWRSFVPTI
PLLTLFFAGTLASTAAVEVTFNIPGFGRTVVNSALNADLPVLQAAVFVVLVVGALSGIVANTLRRIILRRLEGDVAGVSL
STGTTATSVVFDRVSLIIAAIPLVAVAAGMIRSAAINTDDRFASYSAAHPLGADQLGRDIWARLADGFTYSIGVAVLVTA
LCALIGLIAGHLGSWVLHIGDALNAFPAVLLGLILAGALGPSTTTAAIAVLMVGWIPLASHCAAVVQEARASGHYRYAAT
MGASRWHLLRHHVLPWTTPAVIRHAVVRIAHNAISLAALGYLGVGASVGSPDWGVILEESTHYLERAPWMAIGPMLCLVA
LGVVAAVTTDSVGRREASSYHQPE
>Mature_584_residues
MRSPRTLATVIIAVATYALALVATALLPWFTGREPAFAVLRAREREREATPELLQAIREQLDLPRTPWESVSRWFAGVAR
GDFGTSWVNPAQGAWAQATHGLGITATLTFVSTVLCLIVALLIVMPRIAAAARGRRGGVAAPQLLAALAALPDFVVAVIL
LWLCALVLHILPVGGWSSPAHMVLPSLALGVCAGGVYGRVLLITADSASQEPWVEAWRINGVAHSRITRALLWRSFVPTI
PLLTLFFAGTLASTAAVEVTFNIPGFGRTVVNSALNADLPVLQAAVFVVLVVGALSGIVANTLRRIILRRLEGDVAGVSL
STGTTATSVVFDRVSLIIAAIPLVAVAAGMIRSAAINTDDRFASYSAAHPLGADQLGRDIWARLADGFTYSIGVAVLVTA
LCALIGLIAGHLGSWVLHIGDALNAFPAVLLGLILAGALGPSTTTAAIAVLMVGWIPLASHCAAVVQEARASGHYRYAAT
MGASRWHLLRHHVLPWTTPAVIRHAVVRIAHNAISLAALGYLGVGASVGSPDWGVILEESTHYLERAPWMAIGPMLCLVA
LGVVAAVTTDSVGRREASSYHQPE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=211, Percent_Identity=32.2274881516588, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787054, Length=211, Percent_Identity=30.3317535545024, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787549, Length=220, Percent_Identity=30, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787053, Length=257, Percent_Identity=26.8482490272374, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1789889, Length=212, Percent_Identity=26.4150943396226, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787497, Length=254, Percent_Identity=25.1968503937008, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789888, Length=291, Percent_Identity=24.7422680412371, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788505, Length=204, Percent_Identity=24.5098039215686, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 61408; Mature: 61408

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPRTLATVIIAVATYALALVATALLPWFTGREPAFAVLRAREREREATPELLQAIREQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LDLPRTPWESVSRWFAGVARGDFGTSWVNPAQGAWAQATHGLGITATLTFVSTVLCLIVA
HCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
LLIVMPRIAAAARGRRGGVAAPQLLAALAALPDFVVAVILLWLCALVLHILPVGGWSSPA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
HMVLPSLALGVCAGGVYGRVLLITADSASQEPWVEAWRINGVAHSRITRALLWRSFVPTI
HHHHHHHHHHHHHCCHHCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
PLLTLFFAGTLASTAAVEVTFNIPGFGRTVVNSALNADLPVLQAAVFVVLVVGALSGIVA
HHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NTLRRIILRRLEGDVAGVSLSTGTTATSVVFDRVSLIIAAIPLVAVAAGMIRSAAINTDD
HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RFASYSAAHPLGADQLGRDIWARLADGFTYSIGVAVLVTALCALIGLIAGHLGSWVLHIG
HHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALNAFPAVLLGLILAGALGPSTTTAAIAVLMVGWIPLASHCAAVVQEARASGHYRYAAT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
MGASRWHLLRHHVLPWTTPAVIRHAVVRIAHNAISLAALGYLGVGASVGSPDWGVILEES
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC
THYLERAPWMAIGPMLCLVALGVVAAVTTDSVGRREASSYHQPE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
>Mature Secondary Structure
MRSPRTLATVIIAVATYALALVATALLPWFTGREPAFAVLRAREREREATPELLQAIREQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LDLPRTPWESVSRWFAGVARGDFGTSWVNPAQGAWAQATHGLGITATLTFVSTVLCLIVA
HCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
LLIVMPRIAAAARGRRGGVAAPQLLAALAALPDFVVAVILLWLCALVLHILPVGGWSSPA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
HMVLPSLALGVCAGGVYGRVLLITADSASQEPWVEAWRINGVAHSRITRALLWRSFVPTI
HHHHHHHHHHHHHCCHHCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
PLLTLFFAGTLASTAAVEVTFNIPGFGRTVVNSALNADLPVLQAAVFVVLVVGALSGIVA
HHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NTLRRIILRRLEGDVAGVSLSTGTTATSVVFDRVSLIIAAIPLVAVAAGMIRSAAINTDD
HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RFASYSAAHPLGADQLGRDIWARLADGFTYSIGVAVLVTALCALIGLIAGHLGSWVLHIG
HHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALNAFPAVLLGLILAGALGPSTTTAAIAVLMVGWIPLASHCAAVVQEARASGHYRYAAT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
MGASRWHLLRHHVLPWTTPAVIRHAVVRIAHNAISLAALGYLGVGASVGSPDWGVILEES
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC
THYLERAPWMAIGPMLCLVALGVVAAVTTDSVGRREASSYHQPE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]