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The map label for this gene is 38232936

Identifier: 38232936

GI number: 38232936

Start: 281661

End: 282239

Strand: Direct

Name: 38232936

Synonym: DIP0315

Alternate gene names: NA

Gene position: 281661-282239 (Clockwise)

Preceding gene: 38232935

Following gene: 38232937

Centisome position: 11.32

GC content: 59.24

Gene sequence:

>579_bases
ATGCTATCGCTTAGCGCATTCATCCTCGCAACAGCAATTTTCCTCACCAACCCACCACCGCGAATGAGCGCCGACACCAA
GCTGGCACTGCCATCGTGGCTATCGGCACTTATGGCCTACAACCAGCGGTTACGCACCCGTTGCGACTACCACGCTGCCG
CAGAACAACTCGACATCTTCGTTGCCACATCGCGAGCAGGATTATCCCTTGCCCAAGCATGCGCAGCAGTGGCAGCAACC
ACAAGCTCTGCGGTAGACGCAGAACCATGGCGACAGGTAGCAGCCATGGCCTCCTTAGGAGTGCCCATGTCGCGGGCATG
TACACCATTAGCAAACACCGAGGGGCTCGTAGCAGTCGTCGCGGTCATGCGAGCAGCAGATGCGTCGGGAGCATCGATCG
CTGCCGGCTGTGAACGAATTGCTCGGTCCCTGCGCGACCATGCAGTCGACACCTACACCGCCCAAGCAGAACGCACCGGA
GTGCTCATCGCTCTACCACTCACGCTGTGCTTTCTGCCCGCATTCTTCCTCCTAGGGCTCGCCCCAGTAGCGATCAGCCT
AGGCATGGACATCCTCTAA

Upstream 100 bases:

>100_bases
TGCTTAACAACGCCATAGGCCAAACCTTGCTCATCGTAGGAACAGCATTGCAATGTGCGGGACTGCTCTGGTCGCAAGCC
TTAATCAAGGCGGTGGGATA

Downstream 100 bases:

>100_bases
AAAACACCGAAAGGAACCCCATCATGTTGACCACCATTGTGAACCGTTTTCGCCTTCTCGCCAGCGACGATAGCGGCATG
ACTACCATCGAATATGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLSLSAFILATAIFLTNPPPRMSADTKLALPSWLSALMAYNQRLRTRCDYHAAAEQLDIFVATSRAGLSLAQACAAVAAT
TSSAVDAEPWRQVAAMASLGVPMSRACTPLANTEGLVAVVAVMRAADASGASIAAGCERIARSLRDHAVDTYTAQAERTG
VLIALPLTLCFLPAFFLLGLAPVAISLGMDIL

Sequences:

>Translated_192_residues
MLSLSAFILATAIFLTNPPPRMSADTKLALPSWLSALMAYNQRLRTRCDYHAAAEQLDIFVATSRAGLSLAQACAAVAAT
TSSAVDAEPWRQVAAMASLGVPMSRACTPLANTEGLVAVVAVMRAADASGASIAAGCERIARSLRDHAVDTYTAQAERTG
VLIALPLTLCFLPAFFLLGLAPVAISLGMDIL
>Mature_192_residues
MLSLSAFILATAIFLTNPPPRMSADTKLALPSWLSALMAYNQRLRTRCDYHAAAEQLDIFVATSRAGLSLAQACAAVAAT
TSSAVDAEPWRQVAAMASLGVPMSRACTPLANTEGLVAVVAVMRAADASGASIAAGCERIARSLRDHAVDTYTAQAERTG
VLIALPLTLCFLPAFFLLGLAPVAISLGMDIL

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20023; Mature: 20023

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLSAFILATAIFLTNPPPRMSADTKLALPSWLSALMAYNQRLRTRCDYHAAAEQLDIF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VATSRAGLSLAQACAAVAATTSSAVDAEPWRQVAAMASLGVPMSRACTPLANTEGLVAVV
EECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH
AVMRAADASGASIAAGCERIARSLRDHAVDTYTAQAERTGVLIALPLTLCFLPAFFLLGL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHH
APVAISLGMDIL
HHHHHHHCCCCC
>Mature Secondary Structure
MLSLSAFILATAIFLTNPPPRMSADTKLALPSWLSALMAYNQRLRTRCDYHAAAEQLDIF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VATSRAGLSLAQACAAVAATTSSAVDAEPWRQVAAMASLGVPMSRACTPLANTEGLVAVV
EECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH
AVMRAADASGASIAAGCERIARSLRDHAVDTYTAQAERTGVLIALPLTLCFLPAFFLLGL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHH
APVAISLGMDIL
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA