Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

Click here to switch to the map view.

The map label for this gene is 38232904

Identifier: 38232904

GI number: 38232904

Start: 250325

End: 251878

Strand: Reverse

Name: 38232904

Synonym: DIP0283

Alternate gene names: NA

Gene position: 251878-250325 (Counterclockwise)

Preceding gene: 38232905

Following gene: 38232903

Centisome position: 10.12

GC content: 57.59

Gene sequence:

>1554_bases
ATGAGAACTGGGTTGTGGATTTTTTCGGTGGTGGCGATCGCCGCGGTGGCGGTGGGCATTCCTTATGCCATGTTGTTGAA
AGCGGCAGGGACGGGCACTGCGGCGGTCGCACCGATCATCCTCAGCAGCACAATTGCATTGTGTGCAACTTTGTTGGCGG
TGGGTATTGGCACGGTGGGTGCGTTGGCGGCAGCGCAGTTTTCTCGTACAGTAGTATTGCTTCTCGACGTCATCCTGCTG
TTCCAGCTCACCATCCCGCATTTTGTTATCGGTGCTGGTTGGAAGACGATCATGGGACGCACGGGTATTCACCTGTGCTC
GCAGTGTAATTTTTCGGGCCTTGGGCCGTTGTTGTTCACGTTCACGGTGGCGTTTACCCCGTTGGCATATTTTGTGCAGC
GCACGGCGTTGCGCTCGGTGTCGTCGCGTGAGGTGGATGCGGCTCGGGTGGCGGGCCTTCATGGGTGGGCGTTGTTTCGC
GCGGTGTATCAGCCGCGGTTGGTGTTGTTTGCCCCTGCGCTTGCAGTGTTTATTTTTAGTGCGGCGTTGTCGGATCCGGT
AACGCCGAATGTGATGGCGCCGCGGGCGTCGTTAGCGGCAACACGGGTGTGGTTCCAAGGCGATCAGGCGGGGACTGCGC
TGGCGCTTACGTTGCCGGTGGCTGGTGCGGTGGTCGTTGCGGGGCTGGTGTATGCACGGCTGTTGCGTAGTAATCCGGCG
TTGGTGGAGTTGCTTCATTTTGCTGGCAATTCTTCCGGCCAGCCACATCGTGCGGTGGGTGCGCAAGTGCGTGCCCCGCA
GGCGGTGTTGTGCTTCTTGGGTGCAGTTGCGGGATTATTTGTGCTGGTGGCGGCCTTTCGTGGTTTTGTGCATGGTTCTG
AGACGCCGATGGGCAATGCGGTGGTCAATACGGTGGGGTTGGCGTTTTTGGTGTTGTTGTGTTCGTTGTTGTTGTCGGCG
GTTGCGTTGGGGGCGCGGCGTTCGTGTGGCCTGCGGTGGGGTTGGTTGGGCCGGCGTGGTATTGATGCTGTGTTTGCGTT
GTTGGCGTTGTCGCCGGGGGCTGCGATTGGTTGTGGTTTGCAGATTGCGTTGAATCATCCGGGAGTGTACGGGCCGTGGG
CGTCGTTAAGTTTGGTGTTGTTGGCGTGTCTGCCGAGTTCGCTGGCTATGACGTATTTTTTGATGGTTTATATCGGTCCG
TTGATGTCGCGTTCGGAGTATATGGTGTCGTTGTTGCAGGGTGTTGGCCCACTGCGGGCGGTGGCGTCGATTGTGTTGCC
GCGTTCGACGAATGTGGTGATTTTGGGCTTTTTGATGGTGTTTTCTAATGCGTCGGTACTAGCGGTGCCGTTGTTGTGGG
TGAGTTCGCCGGATACTCCCCTTTTGATGTTGCGGCTTTTCACGCTTCTCGACGCCGCCAATTACCCGGCGGCGCTGTAC
ATCAGCATGACTGTGTCTCTTTTTATCGTGTCCCTTGCTGGGGCGATCGTTGTGAGTATTAATGGCGTGGGTTTGGCTGC
CTTCGCTAGGAAACAGGTGGCATCATGGCGTTAA

Upstream 100 bases:

>100_bases
CTACGCGTTTGAAGGATTCGCATGGCATTGTTGCGGTGGATCCGGCGGTTGCCGATTCTGAGCGTGATCGGTGGATGAGT
TGGTTTTCGGAGCAGCGGGC

Downstream 100 bases:

>100_bases
TACATATTCAGGGTCTTAGTGTGACCAGCCGCGGGGCGCGCCTTTTGGATGATGTTTCTTTGGAGGCGGATCCTGGTGAG
CTCATTGTGGTTCTTGGGCG

Product: putative transport system permease (iron)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTVVLLLDVILL
FQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFR
AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA
LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA
VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGP
LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY
ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR

Sequences:

>Translated_517_residues
MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTVVLLLDVILL
FQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFR
AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA
LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA
VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGP
LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY
ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR
>Mature_517_residues
MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTVVLLLDVILL
FQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFR
AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA
LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA
VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGP
LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY
ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53949; Mature: 53949

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVG
CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAAAQFSRTVVLLLDVILLFQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCHHHHH
FTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFRAVYQPRLVLFAPALAVFIFS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA
HHHCCCCCCCCCCCCHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHH
LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNA
HHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
VVNTVGLAFLVLLCSLLLSAVALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGL
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCE
QIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGPLMSRSEYMVSLLQGVGPLRA
EEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH
VASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY
HHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEH
ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR
HHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVG
CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAAAQFSRTVVLLLDVILLFQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCHHHHH
FTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFRAVYQPRLVLFAPALAVFIFS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA
HHHCCCCCCCCCCCCHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHH
LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNA
HHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
VVNTVGLAFLVLLCSLLLSAVALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGL
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCE
QIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGPLMSRSEYMVSLLQGVGPLRA
EEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH
VASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY
HHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEH
ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR
HHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA