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The map label for this gene is recR

Identifier: 38232884

GI number: 38232884

Start: 223919

End: 224575

Strand: Direct

Name: recR

Synonym: DIP0261

Alternate gene names: 38232884

Gene position: 223919-224575 (Clockwise)

Preceding gene: 38232883

Following gene: 38232890

Centisome position: 9.0

GC content: 59.06

Gene sequence:

>657_bases
TTGTTCGAAGGACCTCTCCAAGACCTGATCGACGAGTTTTCTCGGCTCCCTGGTGTGGGGCCGAAGTCGGCTCAGCGCAT
TGCTTTCCACCTGCTCCATGTGGAACCAGCAGACATTACGCGTCTGCAAGATGCGCTGGGTGCTATTCGTGACGGTGTTA
CTTTCTGCCGCATTTGCTGCAATATCTCTCGCGAAGAGGTCTGCCGCATTTGTGCGGACTCTTCACGCGACCGCAGCACC
ATCTGTGTGGTGGAAGAACCCAAAGACATTCAGGTTATTGAACGAACCGGCGAGTACACAGGTCGCTACCATGTGCTCGG
CGGCTCGCTTGACCCCCTTGCCAACATTGGCCCCCGTGAGCTCAACATTTCGCAATTATTGCAGCGTATCGGCGGCGTGT
TGCCAGACCGCGAACTTGCGGACTCCACCCCCGAGACACCGCTTTACGACGCCTCCCCAGAAGTGCGCGAGGTTATCCTC
GCCACCGACCCCAACACCGAAGGCGAAGCCACAGCCTCCTACCTAGCGCGGCTGCTGCGCGACTTCCCAGACCTTGTGGT
GTCACGCCTTGCCTCTGGCATGCCACTCGGCGGCGACTTGGAGTTCGTTGACGAACTTACACTGTCGCGTGCGCTGAGCG
GCAGACTGACGCTGTAG

Upstream 100 bases:

>100_bases
TGCATTCGCAGAGGCTCATGAAAAGCTCGGCACCCTTGCAGAGCAGAAGATGGGCCCGCTGTCTCAGGGCTTCGACGGCC
TTGGTGGGATGTTCTAAGAG

Downstream 100 bases:

>100_bases
GAAACCTACGCTAGGCGCTCCTTGCGCAGCTGGTCGACGACCGGCAGGTCCAAGGGGGCAAGATCAGCAAGGGCAATGCC
CATCGCTTTTGCCAGCAGCA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDALGAIRDGVTFCRICCNISREEVCRICADSSRDRST
ICVVEEPKDIQVIERTGEYTGRYHVLGGSLDPLANIGPRELNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVIL
ATDPNTEGEATASYLARLLRDFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL

Sequences:

>Translated_218_residues
MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDALGAIRDGVTFCRICCNISREEVCRICADSSRDRST
ICVVEEPKDIQVIERTGEYTGRYHVLGGSLDPLANIGPRELNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVIL
ATDPNTEGEATASYLARLLRDFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL
>Mature_218_residues
MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDALGAIRDGVTFCRICCNISREEVCRICADSSRDRST
ICVVEEPKDIQVIERTGEYTGRYHVLGGSLDPLANIGPRELNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVIL
ATDPNTEGEATASYLARLLRDFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=211, Percent_Identity=43.1279620853081, Blast_Score=158, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_CORDI (Q6NJY0)

Other databases:

- EMBL:   BX248354
- RefSeq:   NP_938651.1
- ProteinModelPortal:   Q6NJY0
- SMR:   Q6NJY0
- GeneID:   2650436
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP0261
- NMPDR:   fig|257309.1.peg.242
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q6NJY0
- ProtClustDB:   PRK00076
- BioCyc:   CDIP257309:DIP0261-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 23901; Mature: 23901

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDALGAIRDGVTFCRICC
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NISREEVCRICADSSRDRSTICVVEEPKDIQVIERTGEYTGRYHVLGGSLDPLANIGPRE
CCCHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEECCCCCHHHCCCCCC
LNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVILATDPNTEGEATASYLARLLR
CCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHH
DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDALGAIRDGVTFCRICC
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NISREEVCRICADSSRDRSTICVVEEPKDIQVIERTGEYTGRYHVLGGSLDPLANIGPRE
CCCHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEECCCCCHHHCCCCCC
LNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVILATDPNTEGEATASYLARLLR
CCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHH
DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910