| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232827
Identifier: 38232827
GI number: 38232827
Start: 168436
End: 169686
Strand: Direct
Name: 38232827
Synonym: DIP0203
Alternate gene names: NA
Gene position: 168436-169686 (Clockwise)
Preceding gene: 38232826
Following gene: 38232828
Centisome position: 6.77
GC content: 52.92
Gene sequence:
>1251_bases GTGGGATTTCTCCAGAGAATAGGATTGCTGCCACAGGTGACAACGACACCAACGCAGCACGAGCTTTTAGCGCCGCTTCT TGATACATACATCGGTGTGGTCACAGAGATGCCAACAGAAGAGCTGTTCGCAGAACAGCCTCACTTGCGGACGGTCACGA CGTTTATCGCGCGAGCGATTTCATCAACATCGTTGCATGTGTATCGCCGAGATTCAGACGGTGGCCGGCATCGCGTCCGC GACTCGGATCTGGCAAAACTCATGCGCAGGTCATCGAAGACTGAGCTCATGCAGGACATGTTGAATGGCTCCATCTTGGA TCTGTGTCTGTATGACGAGTTTATTTGGGTGGCCATGGAAGATAGCGATTCAGGGGAGTGGGAACTGCATAGGATCCCAC CGACGTGGATCAAACAACGCAAGCACTCAGATCCGTGGACGCTGGAATGGATGGGGATCATTGACGCGAAGACTGGGCAG CAGATCAAGATCCCAGCAGAACGCATTATCCACGTGCATGGGTACAACCCAACGTCAACGTCTCGCGGGCTTACTCCAGT CGTTGCGCTTCGCGAGACGCTGAAGGAGCAGCTGGAGTCAGCGGCATATCGTGGGCAGCTCTGGCGCAACGGGCCGCGTC TAGGTGGCGTGATCACACGGCCAAAGGACGCGAAGTGGGATTCAACATCGCGTAAGCGGTTTAAGGCTGCATGGCAATCG CAATACTCTGGGCGTGGTTCAGGTGCTGGCGGAACACCGATCTTGGAAGACGGAATGCAGTTCGTGCCAGCGCATCTGAA AGCACAAGACGAACAGGTTGTTGAGATGACCAAGCTGTCATTGCAGACAGTCGCGAGCATCTACCACGTCAATCCTGTCA TGGTCGGGCTTCTTGATAACGCGAATTACTCGAATGTGCGCGAATTCCGACGATCACTGTATGGCGACTCTCTAGGGCCC ATCATCAAACAAGTTGAGGGCGTGATCAATGAATTTTTGCGACCCATGATTGACGATGATGATGCGGTGTACGTCGAGTT CAATCTCGATGAAAAGCTACGAGCCAGCTTTGAGGAAAAAGCGGCAGTGACATCAACTGCGGTCGGTGGCCCATGGATGA CAAGGAACGAAGCTCGTGCAATGAACAACCTTCCGGCAATTGACGGTGGAGAAGATCTGATTACTCCTTTGAATGTCACT ACAGAGAACAGCGAAAGCAATAACGATGTGGGATTGGAGGAAGAATCATGA
Upstream 100 bases:
>100_bases TTCTGCTTATGCAGATGAAGACTACGACACAGCTATCGATTATGACGGCGATGATTACGACGATGACGATTACTTGCTCA TTGTCTAGGAAGGAGGCATC
Downstream 100 bases:
>100_bases CTATCCATGTCGTTATAGGCCCTCCTTGTTCTGGGAAATCAAGCTTTGTTGAGGCTAATGCTCCAGCTGGGATTGGGCGC TTCGATTTCGACAACATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MGFLQRIGLLPQVTTTPTQHELLAPLLDTYIGVVTEMPTEELFAEQPHLRTVTTFIARAISSTSLHVYRRDSDGGRHRVR DSDLAKLMRRSSKTELMQDMLNGSILDLCLYDEFIWVAMEDSDSGEWELHRIPPTWIKQRKHSDPWTLEWMGIIDAKTGQ QIKIPAERIIHVHGYNPTSTSRGLTPVVALRETLKEQLESAAYRGQLWRNGPRLGGVITRPKDAKWDSTSRKRFKAAWQS QYSGRGSGAGGTPILEDGMQFVPAHLKAQDEQVVEMTKLSLQTVASIYHVNPVMVGLLDNANYSNVREFRRSLYGDSLGP IIKQVEGVINEFLRPMIDDDDAVYVEFNLDEKLRASFEEKAAVTSTAVGGPWMTRNEARAMNNLPAIDGGEDLITPLNVT TENSESNNDVGLEEES
Sequences:
>Translated_416_residues MGFLQRIGLLPQVTTTPTQHELLAPLLDTYIGVVTEMPTEELFAEQPHLRTVTTFIARAISSTSLHVYRRDSDGGRHRVR DSDLAKLMRRSSKTELMQDMLNGSILDLCLYDEFIWVAMEDSDSGEWELHRIPPTWIKQRKHSDPWTLEWMGIIDAKTGQ QIKIPAERIIHVHGYNPTSTSRGLTPVVALRETLKEQLESAAYRGQLWRNGPRLGGVITRPKDAKWDSTSRKRFKAAWQS QYSGRGSGAGGTPILEDGMQFVPAHLKAQDEQVVEMTKLSLQTVASIYHVNPVMVGLLDNANYSNVREFRRSLYGDSLGP IIKQVEGVINEFLRPMIDDDDAVYVEFNLDEKLRASFEEKAAVTSTAVGGPWMTRNEARAMNNLPAIDGGEDLITPLNVT TENSESNNDVGLEEES >Mature_415_residues GFLQRIGLLPQVTTTPTQHELLAPLLDTYIGVVTEMPTEELFAEQPHLRTVTTFIARAISSTSLHVYRRDSDGGRHRVRD SDLAKLMRRSSKTELMQDMLNGSILDLCLYDEFIWVAMEDSDSGEWELHRIPPTWIKQRKHSDPWTLEWMGIIDAKTGQQ IKIPAERIIHVHGYNPTSTSRGLTPVVALRETLKEQLESAAYRGQLWRNGPRLGGVITRPKDAKWDSTSRKRFKAAWQSQ YSGRGSGAGGTPILEDGMQFVPAHLKAQDEQVVEMTKLSLQTVASIYHVNPVMVGLLDNANYSNVREFRRSLYGDSLGPI IKQVEGVINEFLRPMIDDDDAVYVEFNLDEKLRASFEEKAAVTSTAVGGPWMTRNEARAMNNLPAIDGGEDLITPLNVTT ENSESNNDVGLEEES
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phage portal family. HK97 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006944 - InterPro: IPR006427 [H]
Pfam domain/function: PF04860 Phage_portal [H]
EC number: NA
Molecular weight: Translated: 46720; Mature: 46589
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLQRIGLLPQVTTTPTQHELLAPLLDTYIGVVTEMPTEELFAEQPHLRTVTTFIARAI CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH SSTSLHVYRRDSDGGRHRVRDSDLAKLMRRSSKTELMQDMLNGSILDLCLYDEFIWVAME CCCEEEEEEECCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHCCEEEEEEE DSDSGEWELHRIPPTWIKQRKHSDPWTLEWMGIIDAKTGQQIKIPAERIIHVHGYNPTST CCCCCCEEEEECCHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCHHHEEEEECCCCCCC SRGLTPVVALRETLKEQLESAAYRGQLWRNGPRLGGVITRPKDAKWDSTSRKRFKAAWQS CCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH QYSGRGSGAGGTPILEDGMQFVPAHLKAQDEQVVEMTKLSLQTVASIYHVNPVMVGLLDN HCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC ANYSNVREFRRSLYGDSLGPIIKQVEGVINEFLRPMIDDDDAVYVEFNLDEKLRASFEEK CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH AAVTSTAVGGPWMTRNEARAMNNLPAIDGGEDLITPLNVTTENSESNNDVGLEEES HHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure GFLQRIGLLPQVTTTPTQHELLAPLLDTYIGVVTEMPTEELFAEQPHLRTVTTFIARAI CHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH SSTSLHVYRRDSDGGRHRVRDSDLAKLMRRSSKTELMQDMLNGSILDLCLYDEFIWVAME CCCEEEEEEECCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHCCEEEEEEE DSDSGEWELHRIPPTWIKQRKHSDPWTLEWMGIIDAKTGQQIKIPAERIIHVHGYNPTST CCCCCCEEEEECCHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCHHHEEEEECCCCCCC SRGLTPVVALRETLKEQLESAAYRGQLWRNGPRLGGVITRPKDAKWDSTSRKRFKAAWQS CCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH QYSGRGSGAGGTPILEDGMQFVPAHLKAQDEQVVEMTKLSLQTVASIYHVNPVMVGLLDN HCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC ANYSNVREFRRSLYGDSLGPIIKQVEGVINEFLRPMIDDDDAVYVEFNLDEKLRASFEEK CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH AAVTSTAVGGPWMTRNEARAMNNLPAIDGGEDLITPLNVTTENSESNNDVGLEEES HHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA