| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232752
Identifier: 38232752
GI number: 38232752
Start: 103155
End: 104525
Strand: Direct
Name: 38232752
Synonym: DIP0124
Alternate gene names: NA
Gene position: 103155-104525 (Clockwise)
Preceding gene: 38232750
Following gene: 38232753
Centisome position: 4.15
GC content: 62.95
Gene sequence:
>1371_bases ATGGTTGCAACTTACACACCGTCCGCCGAGAAGCAGGAAGCGTCGACACGCGCTTTGCCCCGCCACCTGCGACGACTACA CTTCTTCGCAGGCATCATCTGCGCGCCACTCATCTTCATCGCGTCGCTGACCGGCCTCGGCTACGCCTTCGGCCCCAGCC TCGATAAGGCCGTCTACTCCGAAGCCATCAACGTCACACCCAGCGGCGATGAGCTACCGCTAGAACGAATCGTTGACATC GCCCGCGCCACCCACCCCGACCTTGAACTCGCTGGTGTGCGCGTAGGCAACCCCGACCAAGCCACGCGTGTGATGTTCAA CGACCCCACCTTGCCCAAGAGCACCACGCAGGCAGTCTTTGTCAACCAATACACCGGCGACATCACCGGCGACATGCCGC AATACGGTGGATCGGCCGCACTTCCCATCCGACACTGGCTCTCACTCGGACACCGCGATCTCTGGCTCGGCGAACCTGGC CGCCTCTACTCCGAAACCGCCGCATCGTGGCTCGGTGTTCTCGCCGTCAGTGGCGTGTACCTGTGGTGGAAACGGCAGCG CAAAGCTGGCCGCCTAGCTGCCATGTTGCGTATCGACGGCCGCGGCCGCACCCGGAATCTGCGCTGGCACGGAGCAATCG GCACCCTTGTGGCCGCCGGCATGATCTTTTTGACCATCACTGGCTTGACATGGTCGTCTGTAGCAGGCGACAACATTCGT TCGGTACGCACCGCCTTGAACTGGACTACGCCGTCGGTAAGCACGGCGCTCGGTGCGGCGGCCGAGCAAACCCCCGCCGA CCCCCACGCTGAGCACGGCGGACACAGCGGACACCATGCGCACATGGCAGCTCTGGACGTATCTGAGCAGGCACAACGCG TAGCAACCACCGCTGCCGGCGAACTGCGCACCCCCTTTACCGTCAAGCCCCCGAAGGAAGACGGCCACGCCTGGACCGCC GCGGAAGACCGCGTTGCTTACCGCCTCACCTACGACGCCTTGGCTGTCGACGGCTCCAACGGGCAGGTGACCGACCGTGT GGACTTTGAGCAGTGGTCATTGCCCACAAAGCTCACTGCCTGGCTGATCGAATTGCACATGGGCACCCTGCTGGGCGTAC CTAACCAAATCGCCCTCGGTCTGTTGGCTATTGGCCTTCTCATCCTCGTGGTGCGTGGCTACCTGCTGTGGTTCCAGCGC CGTGGCACCGCGTGGGTTGGTAGCGCTCCGGCGCGCAGTGTAGACGGTGTGCGCGGATATGGCGCACTTGGCTGGATAGG CGTTGCTGCCATGGTGATCTATGGCGTGGTGGCACCCCTGTTTGGTGTTACCTGCGTGGCGTTTTTGATCTGCAGCATGC TGAAGAAGTGA
Upstream 100 bases:
>100_bases AATATAGACAATAAAAATATTGAACTTTAGGGAACTCTTGCCTTATTGCTGCCGACAACTACTGCGTTCCATTGCCACAA CCCATCACGGAAAGCTGTTT
Downstream 100 bases:
>100_bases AGTGAGTAGTTCGTGCCAAAACTTTTTGAGGCTCGCAGCGTTTCCGCAGGTCGGAGATATAAGAAAAGATGCAATTTGGC ACGAACTACTCACTCGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; Sulfite Reductase; Peptidase; PepSY-Associated TM Helix Family Protein; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix; Pepsy-Associated Tm Helix Domain Protein; PepSY-Associated TM Helix Containing Protein; Outer Membrane Protein; Sulfite Reductase Flavoprotein Subunit Alpha; Sulfite Reductase Flavoprotein Alpha-Component; Transmembrane Protein; Transmembrane Transporter; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MVATYTPSAEKQEASTRALPRHLRRLHFFAGIICAPLIFIASLTGLGYAFGPSLDKAVYSEAINVTPSGDELPLERIVDI ARATHPDLELAGVRVGNPDQATRVMFNDPTLPKSTTQAVFVNQYTGDITGDMPQYGGSAALPIRHWLSLGHRDLWLGEPG RLYSETAASWLGVLAVSGVYLWWKRQRKAGRLAAMLRIDGRGRTRNLRWHGAIGTLVAAGMIFLTITGLTWSSVAGDNIR SVRTALNWTTPSVSTALGAAAEQTPADPHAEHGGHSGHHAHMAALDVSEQAQRVATTAAGELRTPFTVKPPKEDGHAWTA AEDRVAYRLTYDALAVDGSNGQVTDRVDFEQWSLPTKLTAWLIELHMGTLLGVPNQIALGLLAIGLLILVVRGYLLWFQR RGTAWVGSAPARSVDGVRGYGALGWIGVAAMVIYGVVAPLFGVTCVAFLICSMLKK
Sequences:
>Translated_456_residues MVATYTPSAEKQEASTRALPRHLRRLHFFAGIICAPLIFIASLTGLGYAFGPSLDKAVYSEAINVTPSGDELPLERIVDI ARATHPDLELAGVRVGNPDQATRVMFNDPTLPKSTTQAVFVNQYTGDITGDMPQYGGSAALPIRHWLSLGHRDLWLGEPG RLYSETAASWLGVLAVSGVYLWWKRQRKAGRLAAMLRIDGRGRTRNLRWHGAIGTLVAAGMIFLTITGLTWSSVAGDNIR SVRTALNWTTPSVSTALGAAAEQTPADPHAEHGGHSGHHAHMAALDVSEQAQRVATTAAGELRTPFTVKPPKEDGHAWTA AEDRVAYRLTYDALAVDGSNGQVTDRVDFEQWSLPTKLTAWLIELHMGTLLGVPNQIALGLLAIGLLILVVRGYLLWFQR RGTAWVGSAPARSVDGVRGYGALGWIGVAAMVIYGVVAPLFGVTCVAFLICSMLKK >Mature_456_residues MVATYTPSAEKQEASTRALPRHLRRLHFFAGIICAPLIFIASLTGLGYAFGPSLDKAVYSEAINVTPSGDELPLERIVDI ARATHPDLELAGVRVGNPDQATRVMFNDPTLPKSTTQAVFVNQYTGDITGDMPQYGGSAALPIRHWLSLGHRDLWLGEPG RLYSETAASWLGVLAVSGVYLWWKRQRKAGRLAAMLRIDGRGRTRNLRWHGAIGTLVAAGMIFLTITGLTWSSVAGDNIR SVRTALNWTTPSVSTALGAAAEQTPADPHAEHGGHSGHHAHMAALDVSEQAQRVATTAAGELRTPFTVKPPKEDGHAWTA AEDRVAYRLTYDALAVDGSNGQVTDRVDFEQWSLPTKLTAWLIELHMGTLLGVPNQIALGLLAIGLLILVVRGYLLWFQR RGTAWVGSAPARSVDGVRGYGALGWIGVAAMVIYGVVAPLFGVTCVAFLICSMLKK
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49170; Mature: 49170
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATYTPSAEKQEASTRALPRHLRRLHFFAGIICAPLIFIASLTGLGYAFGPSLDKAVYS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH EAINVTPSGDELPLERIVDIARATHPDLELAGVRVGNPDQATRVMFNDPTLPKSTTQAVF HHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEE VNQYTGDITGDMPQYGGSAALPIRHWLSLGHRDLWLGEPGRLYSETAASWLGVLAVSGVY EECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH LWWKRQRKAGRLAAMLRIDGRGRTRNLRWHGAIGTLVAAGMIFLTITGLTWSSVAGDNIR EEHHHHHHCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHEECCCCCCCCCCHHH SVRTALNWTTPSVSTALGAAAEQTPADPHAEHGGHSGHHAHMAALDVSEQAQRVATTAAG HHHHHHCCCCCCHHHHHHCHHHCCCCCCCHHCCCCCCCCCEEEEECHHHHHHHHHHHHCC ELRTPFTVKPPKEDGHAWTAAEDRVAYRLTYDALAVDGSNGQVTDRVDFEQWSLPTKLTA CCCCCEEECCCCCCCCEEECCCCCEEEEEEEEEEEEECCCCCEEECCCHHHHCCCHHHHH WLIELHMGTLLGVPNQIALGLLAIGLLILVVRGYLLWFQRRGTAWVGSAPARSVDGVRGY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC GALGWIGVAAMVIYGVVAPLFGVTCVAFLICSMLKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVATYTPSAEKQEASTRALPRHLRRLHFFAGIICAPLIFIASLTGLGYAFGPSLDKAVYS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH EAINVTPSGDELPLERIVDIARATHPDLELAGVRVGNPDQATRVMFNDPTLPKSTTQAVF HHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEE VNQYTGDITGDMPQYGGSAALPIRHWLSLGHRDLWLGEPGRLYSETAASWLGVLAVSGVY EECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH LWWKRQRKAGRLAAMLRIDGRGRTRNLRWHGAIGTLVAAGMIFLTITGLTWSSVAGDNIR EEHHHHHHCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHEECCCCCCCCCCHHH SVRTALNWTTPSVSTALGAAAEQTPADPHAEHGGHSGHHAHMAALDVSEQAQRVATTAAG HHHHHHCCCCCCHHHHHHCHHHCCCCCCCHHCCCCCCCCCEEEEECHHHHHHHHHHHHCC ELRTPFTVKPPKEDGHAWTAAEDRVAYRLTYDALAVDGSNGQVTDRVDFEQWSLPTKLTA CCCCCEEECCCCCCCCEEECCCCCEEEEEEEEEEEEECCCCCEEECCCHHHHCCCHHHHH WLIELHMGTLLGVPNQIALGLLAIGLLILVVRGYLLWFQRRGTAWVGSAPARSVDGVRGY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC GALGWIGVAAMVIYGVVAPLFGVTCVAFLICSMLKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA