Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is 38232740

Identifier: 38232740

GI number: 38232740

Start: 91122

End: 92600

Strand: Direct

Name: 38232740

Synonym: DIP0111

Alternate gene names: NA

Gene position: 91122-92600 (Clockwise)

Preceding gene: 38232739

Following gene: 38232741

Centisome position: 3.66

GC content: 57.0

Gene sequence:

>1479_bases
GTGCGACTTCTTAAGCCGGCCCTTGTTCTCGCCATTGTGGCGGGTATGACGCTTTCTGCCTGCGGTTCTGATTCTGCGAC
AAAAGACATCAGCGTTGCAGGCAGTGAACTGTCCTTAGATAAAACAGCGCTGGTTGCGGATTCTTCTGGGGTGGAGGTTT
CGCAAGCGTTTTTCCCTGATGCCGACAAAGTAGATTCGGTTGTGGTGGCAGGTAGCACCGCGCAGCACCGCTGGGAGGGA
GCACAAGAGGCCATTAAGCGCGGGGTCCCGTTGCTTGTCGACGACTCCTCCAACACCGAGGCCATCAATGCCGAGATCGA
ACGGCTTGGGGTAAAAGATGTGGTTCGCATTGGTGATCCAGCAGCCGACGCCCAGCAAGTGGCGGCCAACGCAGCTGCTA
AGAAACAACACACCGAGGACGTGATGGCACGCCAGATCACTGAGCTTTCTGCAGAACACGGTCACCTTGATGGCGGGGCA
GCGGTGTTGGTATCGAAGGCGACGTCGGCAGCTAGTGTTGCTACTGCCAAAGCCTCCGGCGCCACCGTGGAATACCTCTC
TTCAGGTGACCCACGTGAATCCGCTACTTTGCAAAAAGATGCCCACGCCAAAGTGGTGGGCTTAGGGCCGAGCTTTAGCA
ACCAAGAGCGCTTCCACCGCGCGGTAGATATGCTGCAGGGCCCAGAAGTCCCAGGTGGCGGGCACTTGATTTTCCCTGAA
CATCGCCTCGTCGCTTTGTATGGTCACCCCTCTGGCGGTGCACTCGGTGTGATGGGCGAACAACCTGCTCCGGAGGCAGT
GGCCAAGGTAAAAGAGCTTACTGAGCACTATGCCGCCATCGATCCGCAGACCACCACCGTGCCTGCTTTTGAAATTATTG
CCACCGTAGCCAGCGCGGATCCCGGCCCAGACGGCAACTACTCCAACGAAGTCACCATTGATGAGCTGCGTCCGTGGGTA
GACGAGATCGGTAAAGCGGGCGGATATGCGGTCCTTGATCTGCAACCAGGCAGCGCGAACTTCCTCGACCAAGCCAAGCA
GTTCGAGGAGCTGCTCAAACTTCCGCACGTGGGGCTTGCTCTTGACCCCGAGTGGCGCATCAACCCAGGTGAAAAGCCCA
TGGAGCGGGTGGGAAGTGTTGAGGCCGCTGAGATTAATAGCACGGCTGAGTGGCTTGCTGGCCTTGTTCGCGATAATAAC
CTGCCGCAAAAGCCCTTTGTGGTGCACCAGTTCCAGTGGCAGATGATCCGTGATCGGGAGCAGCTTAATACCACCGCCCC
TGAGTTGGCGTGGATTCTGCACGCTGACGGTCATGGTCCGGCGCGCGATAAGTTTGCCACTTGGGAGATGGTGCAGCAGG
ATCTGCAGCCGGAGTTCACTATGGCGTGGAAGAACTTTATTGATGAGGACACCCCGATGTTTACCCCAGAGCAAACTATG
GATATTTATCCTCGCCCAGGGTTTGTTTCTTACCAATAA

Upstream 100 bases:

>100_bases
TGGAGGATTAGGTCTTTCACTTCTTAGGCCGGCGGGAGTTGCTAGGCTGGGGTGCCTGAACCCCAGCTGTAACCACCACA
TCCCTAGGAGGGATTTGATT

Downstream 100 bases:

>100_bases
CTGTATTGTGGTGGGCTATGGCTACTCGTATTGCTGAACCAGGCGAGCCGATCATCGAGTTCTTCGCTGATTGGCTCGAC
GGGATTTCTAATCCCACCAA

Product: putative lipoprotein

Products: NA

Alternate protein names: SH3 Type 3 Domain Protein; LigA Protein

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MRLLKPALVLAIVAGMTLSACGSDSATKDISVAGSELSLDKTALVADSSGVEVSQAFFPDADKVDSVVVAGSTAQHRWEG
AQEAIKRGVPLLVDDSSNTEAINAEIERLGVKDVVRIGDPAADAQQVAANAAAKKQHTEDVMARQITELSAEHGHLDGGA
AVLVSKATSAASVATAKASGATVEYLSSGDPRESATLQKDAHAKVVGLGPSFSNQERFHRAVDMLQGPEVPGGGHLIFPE
HRLVALYGHPSGGALGVMGEQPAPEAVAKVKELTEHYAAIDPQTTTVPAFEIIATVASADPGPDGNYSNEVTIDELRPWV
DEIGKAGGYAVLDLQPGSANFLDQAKQFEELLKLPHVGLALDPEWRINPGEKPMERVGSVEAAEINSTAEWLAGLVRDNN
LPQKPFVVHQFQWQMIRDREQLNTTAPELAWILHADGHGPARDKFATWEMVQQDLQPEFTMAWKNFIDEDTPMFTPEQTM
DIYPRPGFVSYQ

Sequences:

>Translated_492_residues
MRLLKPALVLAIVAGMTLSACGSDSATKDISVAGSELSLDKTALVADSSGVEVSQAFFPDADKVDSVVVAGSTAQHRWEG
AQEAIKRGVPLLVDDSSNTEAINAEIERLGVKDVVRIGDPAADAQQVAANAAAKKQHTEDVMARQITELSAEHGHLDGGA
AVLVSKATSAASVATAKASGATVEYLSSGDPRESATLQKDAHAKVVGLGPSFSNQERFHRAVDMLQGPEVPGGGHLIFPE
HRLVALYGHPSGGALGVMGEQPAPEAVAKVKELTEHYAAIDPQTTTVPAFEIIATVASADPGPDGNYSNEVTIDELRPWV
DEIGKAGGYAVLDLQPGSANFLDQAKQFEELLKLPHVGLALDPEWRINPGEKPMERVGSVEAAEINSTAEWLAGLVRDNN
LPQKPFVVHQFQWQMIRDREQLNTTAPELAWILHADGHGPARDKFATWEMVQQDLQPEFTMAWKNFIDEDTPMFTPEQTM
DIYPRPGFVSYQ
>Mature_492_residues
MRLLKPALVLAIVAGMTLSACGSDSATKDISVAGSELSLDKTALVADSSGVEVSQAFFPDADKVDSVVVAGSTAQHRWEG
AQEAIKRGVPLLVDDSSNTEAINAEIERLGVKDVVRIGDPAADAQQVAANAAAKKQHTEDVMARQITELSAEHGHLDGGA
AVLVSKATSAASVATAKASGATVEYLSSGDPRESATLQKDAHAKVVGLGPSFSNQERFHRAVDMLQGPEVPGGGHLIFPE
HRLVALYGHPSGGALGVMGEQPAPEAVAKVKELTEHYAAIDPQTTTVPAFEIIATVASADPGPDGNYSNEVTIDELRPWV
DEIGKAGGYAVLDLQPGSANFLDQAKQFEELLKLPHVGLALDPEWRINPGEKPMERVGSVEAAEINSTAEWLAGLVRDNN
LPQKPFVVHQFQWQMIRDREQLNTTAPELAWILHADGHGPARDKFATWEMVQQDLQPEFTMAWKNFIDEDTPMFTPEQTM
DIYPRPGFVSYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52755; Mature: 52755

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLKPALVLAIVAGMTLSACGSDSATKDISVAGSELSLDKTALVADSSGVEVSQAFFPD
CCCHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEHHHHCCC
ADKVDSVVVAGSTAQHRWEGAQEAIKRGVPLLVDDSSNTEAINAEIERLGVKDVVRIGDP
CHHCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCHHHHHHCCCC
AADAQQVAANAAAKKQHTEDVMARQITELSAEHGHLDGGAAVLVSKATSAASVATAKASG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHECCCCC
ATVEYLSSGDPRESATLQKDAHAKVVGLGPSFSNQERFHRAVDMLQGPEVPGGGHLIFPE
CEEEECCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCC
HRLVALYGHPSGGALGVMGEQPAPEAVAKVKELTEHYAAIDPQTTTVPAFEIIATVASAD
CEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PGPDGNYSNEVTIDELRPWVDEIGKAGGYAVLDLQPGSANFLDQAKQFEELLKLPHVGLA
CCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEE
LDPEWRINPGEKPMERVGSVEAAEINSTAEWLAGLVRDNNLPQKPFVVHQFQWQMIRDRE
ECCCCCCCCCCCHHHHHCCCCHHHCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH
QLNTTAPELAWILHADGHGPARDKFATWEMVQQDLQPEFTMAWKNFIDEDTPMFTPEQTM
HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
DIYPRPGFVSYQ
CCCCCCCCCCCC
>Mature Secondary Structure
MRLLKPALVLAIVAGMTLSACGSDSATKDISVAGSELSLDKTALVADSSGVEVSQAFFPD
CCCHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEHHHHCCC
ADKVDSVVVAGSTAQHRWEGAQEAIKRGVPLLVDDSSNTEAINAEIERLGVKDVVRIGDP
CHHCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCHHHHHHCCCC
AADAQQVAANAAAKKQHTEDVMARQITELSAEHGHLDGGAAVLVSKATSAASVATAKASG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHECCCCC
ATVEYLSSGDPRESATLQKDAHAKVVGLGPSFSNQERFHRAVDMLQGPEVPGGGHLIFPE
CEEEECCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCC
HRLVALYGHPSGGALGVMGEQPAPEAVAKVKELTEHYAAIDPQTTTVPAFEIIATVASAD
CEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PGPDGNYSNEVTIDELRPWVDEIGKAGGYAVLDLQPGSANFLDQAKQFEELLKLPHVGLA
CCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEE
LDPEWRINPGEKPMERVGSVEAAEINSTAEWLAGLVRDNNLPQKPFVVHQFQWQMIRDRE
ECCCCCCCCCCCHHHHHCCCCHHHCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH
QLNTTAPELAWILHADGHGPARDKFATWEMVQQDLQPEFTMAWKNFIDEDTPMFTPEQTM
HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
DIYPRPGFVSYQ
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA