| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37681422
Identifier: 37681422
GI number: 37681422
Start: 3328172
End: 3329146
Strand: Direct
Name: 37681422
Synonym: VV3238
Alternate gene names: NA
Gene position: 3328172-3329146 (Clockwise)
Preceding gene: 37681420
Following gene: 37681424
Centisome position: 99.21
GC content: 48.1
Gene sequence:
>975_bases ATGGCTCAAGGATCTGCAATGGAAAACCGAATCTTAATCACCACCACACTGATATTCAGTCATATGGCGCAAGCAGGACT GAGTGACACCGCAGGGTTTAGTGGGGAAATCTCACTACTGACTGGCTATGGCGCCTCTCAGTCACACTTTAATACGGAAA CGGATGCAACCATCAGCAACTACTCAAGCAGCGCCAGCCGCGAAGGTGCCGCTCTGTTTGCACCATTGGGGAACATCGCT TACACCTTTGGTCAGCAGCTCGAACAGCAGTTTTACCTCGGTACCGCAAGAGAGGACATCGCTGTTGGTACCCTAGCCTT TGAGTTAGGTTATCAATACCAAATGAGCTCTGGCGTGGTGATTGATTTTTCATTGTTGCCAACCGTGATGTCTGGAGAAA CTTGGCAAGATCCTTATCTGCTCAACCAAAAACGCACGGTCACCGATGAAAGTGGTATTGCGTACCGACTGCAGTTTCAC AACCTCTGGGGTGGCAATGTTAACCTCGACACCGCATATGGCACCAAAGAACTGGAGAAAGACACCATCACCGATCCAAG CCTCAAACGTGATGGAGAGAGTTATTACGCCAAACTGGATTACCGCTACCGACTCAAACCCACCAGCTTTGTTCAGCCCG CCGTGGTTTACTTAAAGCATCAAGCAGATGGCAAAGCGGCCTCTTATGATTCACTCGGGGCTGAAGTGAGTTGGTTTAAT CTGTTTGCTAAACACCGCTTAGTTCTGACCGCGGGTTATAAAGTGCAAGATTATCAAGCCGCCAGTCAACTGTTTGACAA AAAGCGTGAAGACCAACAGCTCAGCCTATTTCTTGCTTATGAGTATGCCCAACTTTTCTCTTCCCCCGATTGGTCTTTCG TTGCTCTGGCTGGGTACAACCAAACCGACTCCAATATCGAGTTTTACAAGCAGAGTGATTACTTACTTTCGGTCGGCGTA AACTACAAGTTTTAA
Upstream 100 bases:
>100_bases GCGTGTAATTATACTGCTCCCGGCCCAGTTTGGAATCTTTGTCAAAATGGTCAGATTAGTTTGTGACCGAAACTGTGGCA AACCACCCTCGTCAGGATGA
Downstream 100 bases:
>100_bases CTCATCACCAAGGCGGTTTAATCTAAGGTTTACCACGATTAAACCGCTTGCAGAGTGAGCTGTTTGAGCAAGCGATCCAT CGCCCGATAACCGAGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAQGSAMENRILITTTLIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISNYSSSASREGAALFAPLGNIA YTFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQMSSGVVIDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFH NLWGGNVNLDTAYGTKELEKDTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFN LFAKHRLVLTAGYKVQDYQAASQLFDKKREDQQLSLFLAYEYAQLFSSPDWSFVALAGYNQTDSNIEFYKQSDYLLSVGV NYKF
Sequences:
>Translated_324_residues MAQGSAMENRILITTTLIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISNYSSSASREGAALFAPLGNIA YTFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQMSSGVVIDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFH NLWGGNVNLDTAYGTKELEKDTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFN LFAKHRLVLTAGYKVQDYQAASQLFDKKREDQQLSLFLAYEYAQLFSSPDWSFVALAGYNQTDSNIEFYKQSDYLLSVGV NYKF >Mature_323_residues AQGSAMENRILITTTLIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISNYSSSASREGAALFAPLGNIAY TFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQMSSGVVIDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFHN LWGGNVNLDTAYGTKELEKDTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFNL FAKHRLVLTAGYKVQDYQAASQLFDKKREDQQLSLFLAYEYAQLFSSPDWSFVALAGYNQTDSNIEFYKQSDYLLSVGVN YKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36173; Mature: 36041
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQGSAMENRILITTTLIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISN CCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHC YSSSASREGAALFAPLGNIAYTFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQMSSGVV CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEECCEEEECCCEE IDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFHNLWGGNVNLDTAYGTKELEK EEEEHHCHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCHHCC DTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFN CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHH LFAKHRLVLTAGYKVQDYQAASQLFDKKREDQQLSLFLAYEYAQLFSSPDWSFVALAGYN HHHHCEEEEEECCEEEHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHCCCCCCEEEEECCC QTDSNIEFYKQSDYLLSVGVNYKF CCCCCEEEEECCCEEEEECCCCCC >Mature Secondary Structure AQGSAMENRILITTTLIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISN CCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHC YSSSASREGAALFAPLGNIAYTFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQMSSGVV CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEECCEEEECCCEE IDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFHNLWGGNVNLDTAYGTKELEK EEEEHHCHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCHHCC DTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFN CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHH LFAKHRLVLTAGYKVQDYQAASQLFDKKREDQQLSLFLAYEYAQLFSSPDWSFVALAGYN HHHHCEEEEEECCEEEHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHCCCCCCEEEEECCC QTDSNIEFYKQSDYLLSVGVNYKF CCCCCEEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA