Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37681381

Identifier: 37681381

GI number: 37681381

Start: 3284647

End: 3285093

Strand: Direct

Name: 37681381

Synonym: VV3197

Alternate gene names: NA

Gene position: 3284647-3285093 (Clockwise)

Preceding gene: 37681380

Following gene: 37681384

Centisome position: 97.92

GC content: 51.45

Gene sequence:

>447_bases
ATGCGTGAATGGCTGAATCGTTATGACACTACCGTTACCCACTTACAATCTTGGGCGGTGCCCGGAGTATTACTATTTTG
TCGCCTTTGGGTGGCGTGGGTTTTCTTCAATGCCGGATTAAGCAAAATCGCCACATGGGATAGCACTCTCTATCTGTTCG
AGTTGGAATATCAGGTGCCTATTTTACCCTGGGAGTTGGCCGCTTATCTCGCCACGGCGGCCGAGCTCAGCTTGCCGATC
TTACTCGCCCTCGGCGTGTTCACCCGCATCACCAGCCTAGTACTATTTGCCTTTAACGCGATGGCCGTGATCTCCTACCC
GCTTTTGTGGGAGAAAGGGTTTTACGATCATCAAATATGGGGGTTGATGCTGCTGATGACGTTTCTTTGGGGCGCGGGGC
GAATTTCGCTCGATCACTGCTTTCGCCAAGAAATAGAGAAACGCTAG

Upstream 100 bases:

>100_bases
CCCCTCGCACAGATACCCGCACCTTTGCTTGCTGAACTGGCTTTTCTGTTCGAACTGGGTATTTTCGCGGGTTTTTCTCT
CGCACCACAAGGAGGCTCCG

Downstream 100 bases:

>100_bases
AAAGAAAAATCCCCGCTCAAATTGGCGGGGATTCTTTTATTTGTTCTGTAGATAAGCAAGCAGCTCGTCAGCGGAAATAC
CTTGCTCGGCAAGCTCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: DoxX Family Protein; DoxD Family Protein; NADH Dehydrogenase

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MREWLNRYDTTVTHLQSWAVPGVLLFCRLWVAWVFFNAGLSKIATWDSTLYLFELEYQVPILPWELAAYLATAAELSLPI
LLALGVFTRITSLVLFAFNAMAVISYPLLWEKGFYDHQIWGLMLLMTFLWGAGRISLDHCFRQEIEKR

Sequences:

>Translated_148_residues
MREWLNRYDTTVTHLQSWAVPGVLLFCRLWVAWVFFNAGLSKIATWDSTLYLFELEYQVPILPWELAAYLATAAELSLPI
LLALGVFTRITSLVLFAFNAMAVISYPLLWEKGFYDHQIWGLMLLMTFLWGAGRISLDHCFRQEIEKR
>Mature_148_residues
MREWLNRYDTTVTHLQSWAVPGVLLFCRLWVAWVFFNAGLSKIATWDSTLYLFELEYQVPILPWELAAYLATAAELSLPI
LLALGVFTRITSLVLFAFNAMAVISYPLLWEKGFYDHQIWGLMLLMTFLWGAGRISLDHCFRQEIEKR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17252; Mature: 17252

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREWLNRYDTTVTHLQSWAVPGVLLFCRLWVAWVFFNAGLSKIATWDSTLYLFELEYQVP
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
ILPWELAAYLATAAELSLPILLALGVFTRITSLVLFAFNAMAVISYPLLWEKGFYDHQIW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GLMLLMTFLWGAGRISLDHCFRQEIEKR
HHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MREWLNRYDTTVTHLQSWAVPGVLLFCRLWVAWVFFNAGLSKIATWDSTLYLFELEYQVP
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
ILPWELAAYLATAAELSLPILLALGVFTRITSLVLFAFNAMAVISYPLLWEKGFYDHQIW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GLMLLMTFLWGAGRISLDHCFRQEIEKR
HHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA