| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is aroQ [H]
Identifier: 37681318
GI number: 37681318
Start: 3218133
End: 3218648
Strand: Direct
Name: aroQ [H]
Synonym: VV3134
Alternate gene names: 37681318
Gene position: 3218133-3218648 (Clockwise)
Preceding gene: 161486590
Following gene: 37681319
Centisome position: 95.93
GC content: 50.58
Gene sequence:
>516_bases GTGCCGATTTCTCGTATTTTTGGGAATATGCTGGTTCCACTCACGTTAAAGGAAGATAGCGTCAACATGTCTGCAAAATC ACGAATTCTGGTCCTTAACGGCCCAAATATTAACCTGCTGGGTTTGCGTGAGCCGGGTCATTACGGTCACCAAACTTTGC CGCAAATCGTCGATACGCTGACACAACAGGCGCAAACTGCAGGCATTGAGCTCGAACACCTGCAATCGAATCGTGAGTAT GAATTGATTGAAGCCATCCATGCCGCACACGGCAACGTCGACTTCATCATCATCAATCCGGCGGCTTTTACTCACACCAG TGTTGCGCTACGTGATGCGCTACTGGGTGTTGCCATCCCTTTTATTGAAGTGCACCTCTCCAACGTACACGCTCGTGAGC CGTTCCGACATCACTCTTATTTGTCGGACAAAGCGCTCGGCGTGATTTGTGGCTTAGGGGCGCAAGGCTATGAATTCGCT CTGTCGGCAGCCATTGCTCGTCTGCAGGCAAAGTAA
Upstream 100 bases:
>100_bases CAAACAGGGAGATTAGACCAGTAAATTGCTGCTAATTGTAATGAATTGGCTATAATCTTGGTCGATTTTGAAAAATTTGC GCGTTTTTTACAAAAATCTC
Downstream 100 bases:
>100_bases ACCCAACACTCTGCAACCCTTTAGGGTTGTCTTACTCACAAGATAAAAGAGAAAGAAAAGATGGATATTCGTAAAATCAA AAAGCTTATCGAACTAGTTG
Product: 3-dehydroquinate dehydratase
Products: NA
Alternate protein names: 3-dehydroquinase; Type II DHQase [H]
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPISRIFGNMLVPLTLKEDSVNMSAKSRILVLNGPNINLLGLREPGHYGHQTLPQIVDTLTQQAQTAGIELEHLQSNREY ELIEAIHAAHGNVDFIIINPAAFTHTSVALRDALLGVAIPFIEVHLSNVHAREPFRHHSYLSDKALGVICGLGAQGYEFA LSAAIARLQAK
Sequences:
>Translated_171_residues MPISRIFGNMLVPLTLKEDSVNMSAKSRILVLNGPNINLLGLREPGHYGHQTLPQIVDTLTQQAQTAGIELEHLQSNREY ELIEAIHAAHGNVDFIIINPAAFTHTSVALRDALLGVAIPFIEVHLSNVHAREPFRHHSYLSDKALGVICGLGAQGYEFA LSAAIARLQAK >Mature_170_residues PISRIFGNMLVPLTLKEDSVNMSAKSRILVLNGPNINLLGLREPGHYGHQTLPQIVDTLTQQAQTAGIELEHLQSNREYE LIEAIHAAHGNVDFIIINPAAFTHTSVALRDALLGVAIPFIEVHLSNVHAREPFRHHSYLSDKALGVICGLGAQGYEFAL SAAIARLQAK
Specific function: Catalyzes a trans-dehydration via an enolate intermediate [H]
COG id: COG0757
COG function: function code E; 3-dehydroquinate dehydratase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-II 3-dehydroquinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001874 - InterPro: IPR018509 - ProDom: PD004527 [H]
Pfam domain/function: PF01220 DHquinase_II [H]
EC number: =4.2.1.10 [H]
Molecular weight: Translated: 18672; Mature: 18541
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS01029 DEHYDROQUINASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISRIFGNMLVPLTLKEDSVNMSAKSRILVLNGPNINLLGLREPGHYGHQTLPQIVDTL CCHHHHHCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHH TQQAQTAGIELEHLQSNREYELIEAIHAAHGNVDFIIINPAAFTHTSVALRDALLGVAIP HHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH FIEVHLSNVHAREPFRHHSYLSDKALGVICGLGAQGYEFALSAAIARLQAK HHEEEECCCCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PISRIFGNMLVPLTLKEDSVNMSAKSRILVLNGPNINLLGLREPGHYGHQTLPQIVDTL CHHHHHCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHH TQQAQTAGIELEHLQSNREYELIEAIHAAHGNVDFIIINPAAFTHTSVALRDALLGVAIP HHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH FIEVHLSNVHAREPFRHHSYLSDKALGVICGLGAQGYEFALSAAIARLQAK HHEEEECCCCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA