| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is acsA [H]
Identifier: 161486590
GI number: 161486590
Start: 3215950
End: 3217902
Strand: Direct
Name: acsA [H]
Synonym: VV3133
Alternate gene names: 161486590
Gene position: 3215950-3217902 (Clockwise)
Preceding gene: 37681316
Following gene: 37681318
Centisome position: 95.87
GC content: 52.12
Gene sequence:
>1953_bases ATGAGTGAAGCCCACATTTATCCGGTAAAAGAGAACATCAAAGCCCATACCCATGCGGATAATGATACCTACCTAGCCAT GTACCAGCAGTCAGTCACTGACCCAGAAGGTTTCTGGAGTGAACACGGCAAAATTGTTGACTGGATTAAGCCCTTCACCA AAGTCAAACAAACGTCTTTTGATACTGGCCACGTTGATATTCGCTGGTTTGAAGATGGCACGCTCAACGTCTCAGCAAAC TGTATTGACCGCCATCTAGCAGAGCGCGGCGATGATGTCGCCATCATTTGGGAAGGCGACAACCCAGCGGACGACAAAAC TCTGACTTACAACGAGCTCTACACCGAAGTGTGTCGTTTCTCGAATGCACTCAAAGAGCAAGGCGTACGCAAAGGCGACG TGGTGTGTCTCTACATGCCAATGGTCCCTGAAGCGGCGGTTGCGATGTTGGCCTGTACCCGTATTGGTGCGGTGCACACC ATCGTCTTTGGTGGTTTTTCACCAGAAGCACTGGCTGGCCGCATCATCGACTCCGATGCCAAAGTCGTCATCACGGCCGA CGAAGGCGTTCGTGGTGGTCGCGCGGTGCCACTGAAAAAGAACGTGGACGAAGCACTAACCAACCCAGAAGTGAAAACCA TCAGCAAAGTGGTGGTGTTCAAGCGCACTGGCGGCAACATTGATTGGCACGAACATCGTGATGTTTGGTGGCACGAAGCG ACAGCAAAAGTCTCTGACGTTTGCCCACCAGAAGAGATGAAAGCTGAAGATCCGCTGTTCATCCTCTACACGTCAGGCTC AACCGGCAAACCGAAAGGCGTGCTGCACACCACGGGCGGCTATTTGGTCTACGCGACCATGACCTTTAAGTACGTGTTTG ACTACCAGCCAGGCGAAACTTTCTGGTGTACGGCCGACGTGGGTTGGATCACTGGCCACACGTATCTGGTTTACGGTCCA CTGGCAAACGGCGCGAAAACCATTCTCTTTGAAGGCGTGCCAAACTATCCAAACACCAGCCGCATGAGTGAAGTGGTCGA TAAGCACCAAGTCAACATTCTTTACACCGCACCAACGGCCATTCGTGCGCTGATGGCAAAAGGCAACGAAGCGATTGAAG GTACGGATCGTAGCAGCCTACGCATCATGGGCTCTGTGGGTGAACCTATTAACCCAGAGGCGTGGGAGTGGTACTACAAG ACCATCGGCAACGAGAAATCACCGATTGTCGATACTTGGTGGCAAACCGAAACCGGCGGCATTTTGATCACACCACTGCC AGGCGCCACCGCGCTGAAACCGGGTTCTGCAACGCGCCCATTCTTTGGTGTTCAGCCTGCACTGGTGGACAACATGGGTA ATGTGATCGAAGACCAAGCCGCAGAAGGTAACCTCGTTATCCTCGATTCTTGGCCAGGTCAAATGCGCACGGTTTATGGT GACCATGAACGTTTCGAACAAACCTACTTCTCAACCTTTAAAGGCATGTACTTTACCGGAGATGGTGCGCGCCGCGATGA AGATGGTTACTACTGGATCACAGGCCGTGTGGATGACGTATTAAACGTTTCTGGCCACCGTATGGGTACAGCGGAAATTG AATCCGCCCTAGTGGCACACCCGAAAATTGCTGAAGCGGCGATTGTTGGCATTCCACACGACATCAAAGGCCAAGCAATT TACGCCTATGTCACCCTCAATGCGGGCGAGTATCCAACCGCCGAGCTGCATAAAGAAGTGAAAGATTGGGTACGTAAAGA GATTGGCCCCATCGCAACACCAGATGTCCTGCATTGGACAGATGCACTACCGAAAACTCGTTCAGGTAAAATCATGCGCC GCATTTTGCGCAAGATCGCCACGGGAGACACCAGCAACTTGGGTGACACCTCAACACTGGCCGACCCAAGCGTAGTTGAT AAGCTGATCGCAGAAAAAGCCGAACTGGTTTAA
Upstream 100 bases:
>100_bases TTGACAGTTAGAGGCATACGGATTCCCCCTTTCGTGATTGATGACTGTTTTAAACGTCATGGAACTCCATCACGAAGACA AAGGCACAAGGAGAGAGACA
Downstream 100 bases:
>100_bases TCCGTTTTAAACAAAACACCCTCAAAGCCACTCTACATAAGAGTGGCTTTTTTGTTTGCCGTTATCATTACCCATACTGT AAGAAAGGTTAATCTTGTTT
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MSEAHIYPVKENIKAHTHADNDTYLAMYQQSVTDPEGFWSEHGKIVDWIKPFTKVKQTSFDTGHVDIRWFEDGTLNVSAN CIDRHLAERGDDVAIIWEGDNPADDKTLTYNELYTEVCRFSNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHT IVFGGFSPEALAGRIIDSDAKVVITADEGVRGGRAVPLKKNVDEALTNPEVKTISKVVVFKRTGGNIDWHEHRDVWWHEA TAKVSDVCPPEEMKAEDPLFILYTSGSTGKPKGVLHTTGGYLVYATMTFKYVFDYQPGETFWCTADVGWITGHTYLVYGP LANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAIEGTDRSSLRIMGSVGEPINPEAWEWYYK TIGNEKSPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPALVDNMGNVIEDQAAEGNLVILDSWPGQMRTVYG DHERFEQTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAHPKIAEAAIVGIPHDIKGQAI YAYVTLNAGEYPTAELHKEVKDWVRKEIGPIATPDVLHWTDALPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVD KLIAEKAELV
Sequences:
>Translated_650_residues MSEAHIYPVKENIKAHTHADNDTYLAMYQQSVTDPEGFWSEHGKIVDWIKPFTKVKQTSFDTGHVDIRWFEDGTLNVSAN CIDRHLAERGDDVAIIWEGDNPADDKTLTYNELYTEVCRFSNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHT IVFGGFSPEALAGRIIDSDAKVVITADEGVRGGRAVPLKKNVDEALTNPEVKTISKVVVFKRTGGNIDWHEHRDVWWHEA TAKVSDVCPPEEMKAEDPLFILYTSGSTGKPKGVLHTTGGYLVYATMTFKYVFDYQPGETFWCTADVGWITGHTYLVYGP LANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAIEGTDRSSLRIMGSVGEPINPEAWEWYYK TIGNEKSPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPALVDNMGNVIEDQAAEGNLVILDSWPGQMRTVYG DHERFEQTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAHPKIAEAAIVGIPHDIKGQAI YAYVTLNAGEYPTAELHKEVKDWVRKEIGPIATPDVLHWTDALPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVD KLIAEKAELV >Mature_649_residues SEAHIYPVKENIKAHTHADNDTYLAMYQQSVTDPEGFWSEHGKIVDWIKPFTKVKQTSFDTGHVDIRWFEDGTLNVSANC IDRHLAERGDDVAIIWEGDNPADDKTLTYNELYTEVCRFSNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHTI VFGGFSPEALAGRIIDSDAKVVITADEGVRGGRAVPLKKNVDEALTNPEVKTISKVVVFKRTGGNIDWHEHRDVWWHEAT AKVSDVCPPEEMKAEDPLFILYTSGSTGKPKGVLHTTGGYLVYATMTFKYVFDYQPGETFWCTADVGWITGHTYLVYGPL ANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAIEGTDRSSLRIMGSVGEPINPEAWEWYYKT IGNEKSPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPALVDNMGNVIEDQAAEGNLVILDSWPGQMRTVYGD HERFEQTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAHPKIAEAAIVGIPHDIKGQAIY AYVTLNAGEYPTAELHKEVKDWVRKEIGPIATPDVLHWTDALPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVDK LIAEKAELV
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=653, Percent_Identity=52.0673813169985, Blast_Score=692, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=666, Percent_Identity=51.0510510510511, Blast_Score=687, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=626, Percent_Identity=50.6389776357827, Blast_Score=648, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=635, Percent_Identity=36.6929133858268, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI42544132, Length=543, Percent_Identity=29.4659300184162, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI122937307, Length=552, Percent_Identity=27.7173913043478, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI38505220, Length=517, Percent_Identity=29.9806576402321, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI115511026, Length=546, Percent_Identity=27.8388278388278, Blast_Score=177, Evalue=4e-44, Organism=Homo sapiens, GI31982927, Length=647, Percent_Identity=23.8021638330757, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI58082049, Length=530, Percent_Identity=24.7169811320755, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI157311624, Length=530, Percent_Identity=24.3396226415094, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI157311622, Length=530, Percent_Identity=24.3396226415094, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI187761345, Length=574, Percent_Identity=25.0871080139373, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI187761343, Length=574, Percent_Identity=25.0871080139373, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI195947378, Length=406, Percent_Identity=27.8325123152709, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI42544134, Length=361, Percent_Identity=26.0387811634349, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI156151445, Length=388, Percent_Identity=24.4845360824742, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1790505, Length=649, Percent_Identity=74.5762711864407, Blast_Score=1037, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=631, Percent_Identity=35.4992076069731, Blast_Score=388, Evalue=1e-109, Organism=Escherichia coli, GI1788107, Length=578, Percent_Identity=23.7024221453287, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI221142682, Length=561, Percent_Identity=22.9946524064171, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI145693145, Length=529, Percent_Identity=23.062381852552, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1786810, Length=570, Percent_Identity=20.7017543859649, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71982997, Length=640, Percent_Identity=51.40625, Blast_Score=642, Evalue=0.0, Organism=Caenorhabditis elegans, GI71983001, Length=641, Percent_Identity=51.3260530421217, Blast_Score=642, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=591, Percent_Identity=23.1810490693739, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17559526, Length=555, Percent_Identity=24.6846846846847, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17557194, Length=576, Percent_Identity=23.0902777777778, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17558820, Length=518, Percent_Identity=23.3590733590734, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI32563687, Length=516, Percent_Identity=23.6434108527132, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17538037, Length=137, Percent_Identity=32.1167883211679, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71985884, Length=376, Percent_Identity=25.531914893617, Blast_Score=82, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323182, Length=640, Percent_Identity=48.59375, Blast_Score=629, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319264, Length=635, Percent_Identity=48.0314960629921, Blast_Score=599, Evalue=1e-172, Organism=Saccharomyces cerevisiae, GI6319699, Length=405, Percent_Identity=24.4444444444444, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI24667955, Length=665, Percent_Identity=53.0827067669173, Blast_Score=695, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=563, Percent_Identity=57.7264653641208, Blast_Score=652, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=521, Percent_Identity=57.9654510556622, Blast_Score=605, Evalue=1e-173, Organism=Drosophila melanogaster, GI21355225, Length=637, Percent_Identity=36.2637362637363, Blast_Score=391, Evalue=1e-108, Organism=Drosophila melanogaster, GI18859661, Length=542, Percent_Identity=25.4612546125461, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI21355181, Length=518, Percent_Identity=23.7451737451737, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI24656500, Length=530, Percent_Identity=24.5283018867925, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24581924, Length=536, Percent_Identity=20.8955223880597, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 71912; Mature: 71781
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAHIYPVKENIKAHTHADNDTYLAMYQQSVTDPEGFWSEHGKIVDWIKPFTKVKQTSF CCCCEEEEHHHCCEEEECCCCCCEEEEEECCCCCCCHHHHHCCCEEHHHHHHHHHHHCCC DTGHVDIRWFEDGTLNVSANCIDRHLAERGDDVAIIWEGDNPADDKTLTYNELYTEVCRF CCCCEEEEEECCCEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHH SNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHTIVFGGFSPEALAGRIIDSDA HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHCEEECCCC KVVITADEGVRGGRAVPLKKNVDEALTNPEVKTISKVVVFKRTGGNIDWHEHRDVWWHEA EEEEECCCCCCCCEECCCCCCHHHHHCCCCHHEEEEEEEEEECCCCCCCCCCCCCEEECC TAKVSDVCPPEEMKAEDPLFILYTSGSTGKPKGVLHTTGGYLVYATMTFKYVFDYQPGET CCHHHCCCCCHHCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEEEEEEEEEEECCCCE FWCTADVGWITGHTYLVYGPLANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTA EEEEECCCEEECCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAKGNEAIEGTDRSSLRIMGSVGEPINPEAWEWYYKTIGNEKSPIVDTWWQTETGG HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECEECCCCC ILITPLPGATALKPGSATRPFFGVQPALVDNMGNVIEDQAAEGNLVILDSWPGQMRTVYG EEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECC DHERFEQTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAH CHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHCC PKIAEAAIVGIPHDIKGQAIYAYVTLNAGEYPTAELHKEVKDWVRKEIGPIATPDVLHWT CCHHCEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH DALPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVDKLIAEKAELV HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SEAHIYPVKENIKAHTHADNDTYLAMYQQSVTDPEGFWSEHGKIVDWIKPFTKVKQTSF CCCEEEEHHHCCEEEECCCCCCEEEEEECCCCCCCHHHHHCCCEEHHHHHHHHHHHCCC DTGHVDIRWFEDGTLNVSANCIDRHLAERGDDVAIIWEGDNPADDKTLTYNELYTEVCRF CCCCEEEEEECCCEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHH SNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHTIVFGGFSPEALAGRIIDSDA HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHCEEECCCC KVVITADEGVRGGRAVPLKKNVDEALTNPEVKTISKVVVFKRTGGNIDWHEHRDVWWHEA EEEEECCCCCCCCEECCCCCCHHHHHCCCCHHEEEEEEEEEECCCCCCCCCCCCCEEECC TAKVSDVCPPEEMKAEDPLFILYTSGSTGKPKGVLHTTGGYLVYATMTFKYVFDYQPGET CCHHHCCCCCHHCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEEEEEEEEEEECCCCE FWCTADVGWITGHTYLVYGPLANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTA EEEEECCCEEECCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAKGNEAIEGTDRSSLRIMGSVGEPINPEAWEWYYKTIGNEKSPIVDTWWQTETGG HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECEECCCCC ILITPLPGATALKPGSATRPFFGVQPALVDNMGNVIEDQAAEGNLVILDSWPGQMRTVYG EEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECC DHERFEQTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAH CHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHCC PKIAEAAIVGIPHDIKGQAIYAYVTLNAGEYPTAELHKEVKDWVRKEIGPIATPDVLHWT CCHHCEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH DALPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVDKLIAEKAELV HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]