| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is insG [H]
Identifier: 37681275
GI number: 37681275
Start: 3173627
End: 3174952
Strand: Direct
Name: insG [H]
Synonym: VV3091
Alternate gene names: 37681275
Gene position: 3173627-3174952 (Clockwise)
Preceding gene: 37681274
Following gene: 37681280
Centisome position: 94.61
GC content: 45.85
Gene sequence:
>1326_bases TTGCAATTAACTACAGCCCTAACACTCGCCAATCGTTATGCCCCCAATACTGAACAACTTGGAAAACTCAGTGACATTCT TTGCCCTGATTTCATCAACCAATGCTTAGACGCTTCCGGTGTGGCCACTATTCGTAAACGTCGTATCCCTCTCGACATGG CCGTTTGGGCGGTCGTTGCTATGTCGCTTTACCGACAAGAGCCTTTGTGGTCAATTGTCTCCAAAGCGCAATTAATGTTG CCCGGGAAGCGAAGTCTGGTTGCCCCTAGTGCTATCGTTCAAGCGAGACAACGGCTCGGGGCTGATGCAATGAAAGAAGT ATTTCATCAAAGCCAGAGCTTATGGAATGAAACAGCTGACCATCCGACTTGGTGTGGATTAAAACTCCTCGCTGTCGATG GCGTGGTATGGCGAACGCCAGACACTAAGGAAAACCGTGATGCGTTTCAATCTGCGTCAAATCAGAATGGTGAAGGTAGC TTCCCTCAGGTGCGTATGGTTTGCCAGATGGAGTTGACCAGTCACATGCTGGTCGCCAGTGCTTTCGCGAGTTACAAAAC CAATGAGATGATATTGGCGGAACAGTTGATTGAAACAACACCAGACTACAGCCTCACAATGTTCGACAGAGGTTTTTACT CTCTTAGCCTTCTTCATCGTTGGGCAAATACAGGTAATGAAAGGCATTGGCTAATGCCAATGCGCAAGAATACCCAATTT ACTGAAGTTAGAAAGCTGGGTCGCAATGATCGGATTGTCGAACTCAAGACAACGCCTCAAGCGAGAAAGAAGTCCCTGTC ACTACCTGAAACCATCGAAGTTCGCCTGATAAAGAAAACTATCAAAGGGAAAGAAGTGAGTATCTTGACCTCGATGACTG ATCATCGTCGTTATCCGCCAGCGGAAATAGCAGAGCTTTACAGTCATAGATGGGAAATCGAAGTGGGATATCGGGAAATG AAGTCTTCACTTCTGAACAACGAATTCACACTGAGAAGCAAGAAGCCAGAGATGGTAAAACAAGAACTATGGGGCTTATT GCTTAGCTATAACATTATTAGATATCAGATGGTTAACATGGCTAAAGCTGTGCCTGGCATCTACCCCAACCAACTGAGCT TCACAACGTGTGCTCACTCTATCATTCACGTAATTTTGGGGTTCTGGTTGGAGTCAGCGGGAACAATCCCTAAGCGCATT ACTCACTTGCAAGAAGAGGCGATACACCATGTCTTGTCCATTAAACGAGAAGAGCGGATATATCCGAGAGCAATAAAACC AAAGGCAAAGAAATACCCCAATAAAAAAGCCAGTCAGCTTAACTGA
Upstream 100 bases:
>100_bases AAGGCTTAATGCCGATCAGTTAAGAGATAAATGATCGGTTGAACGATCCAGCAGATGGCTTATAAAGGCTCTAAGTTTCT AAAACTTTGAGCCTTTTATT
Downstream 100 bases:
>100_bases CTGGCATTAAGCCAAGGCTCCCATTTTTCGTTCGCGTTGCCACCTAGTAGTAGGCTTCCACCACCTCAATAAAACGAGGC AATTCTTCTGCGGTTAAGGC
Product: transposase and inactivated derivative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVAMSLYRQEPLWSIVSKAQLML PGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETADHPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGS FPQVRMVCQMELTSHMLVASAFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPPAEIAELYSHRWEIEVGYREM KSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNMAKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRI THLQEEAIHHVLSIKREERIYPRAIKPKAKKYPNKKASQLN
Sequences:
>Translated_441_residues MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVAMSLYRQEPLWSIVSKAQLML PGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETADHPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGS FPQVRMVCQMELTSHMLVASAFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPPAEIAELYSHRWEIEVGYREM KSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNMAKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRI THLQEEAIHHVLSIKREERIYPRAIKPKAKKYPNKKASQLN >Mature_441_residues MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVAMSLYRQEPLWSIVSKAQLML PGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETADHPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGS FPQVRMVCQMELTSHMLVASAFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPPAEIAELYSHRWEIEVGYREM KSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNMAKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRI THLQEEAIHHVLSIKREERIYPRAIKPKAKKYPNKKASQLN
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=434, Percent_Identity=50, Blast_Score=457, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 50536; Mature: 50536
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVA CCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH MSLYRQEPLWSIVSKAQLMLPGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETAD HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC HPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGSFPQVRMVCQMELTSHMLVAS CCCCCCEEEEEECCEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF HHHHCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHH TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPP HHHHHCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCH AEIAELYSHRWEIEVGYREMKSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNM HHHHHHHHCCCEEEECHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRITHLQEEAIHHVLSIKREERI HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC YPRAIKPKAKKYPNKKASQLN CCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVA CCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH MSLYRQEPLWSIVSKAQLMLPGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETAD HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC HPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGSFPQVRMVCQMELTSHMLVAS CCCCCCEEEEEECCEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF HHHHCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHH TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPP HHHHHCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCH AEIAELYSHRWEIEVGYREMKSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNM HHHHHHHHCCCEEEECHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRITHLQEEAIHHVLSIKREERI HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC YPRAIKPKAKKYPNKKASQLN CCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]