Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is insG [H]

Identifier: 37681275

GI number: 37681275

Start: 3173627

End: 3174952

Strand: Direct

Name: insG [H]

Synonym: VV3091

Alternate gene names: 37681275

Gene position: 3173627-3174952 (Clockwise)

Preceding gene: 37681274

Following gene: 37681280

Centisome position: 94.61

GC content: 45.85

Gene sequence:

>1326_bases
TTGCAATTAACTACAGCCCTAACACTCGCCAATCGTTATGCCCCCAATACTGAACAACTTGGAAAACTCAGTGACATTCT
TTGCCCTGATTTCATCAACCAATGCTTAGACGCTTCCGGTGTGGCCACTATTCGTAAACGTCGTATCCCTCTCGACATGG
CCGTTTGGGCGGTCGTTGCTATGTCGCTTTACCGACAAGAGCCTTTGTGGTCAATTGTCTCCAAAGCGCAATTAATGTTG
CCCGGGAAGCGAAGTCTGGTTGCCCCTAGTGCTATCGTTCAAGCGAGACAACGGCTCGGGGCTGATGCAATGAAAGAAGT
ATTTCATCAAAGCCAGAGCTTATGGAATGAAACAGCTGACCATCCGACTTGGTGTGGATTAAAACTCCTCGCTGTCGATG
GCGTGGTATGGCGAACGCCAGACACTAAGGAAAACCGTGATGCGTTTCAATCTGCGTCAAATCAGAATGGTGAAGGTAGC
TTCCCTCAGGTGCGTATGGTTTGCCAGATGGAGTTGACCAGTCACATGCTGGTCGCCAGTGCTTTCGCGAGTTACAAAAC
CAATGAGATGATATTGGCGGAACAGTTGATTGAAACAACACCAGACTACAGCCTCACAATGTTCGACAGAGGTTTTTACT
CTCTTAGCCTTCTTCATCGTTGGGCAAATACAGGTAATGAAAGGCATTGGCTAATGCCAATGCGCAAGAATACCCAATTT
ACTGAAGTTAGAAAGCTGGGTCGCAATGATCGGATTGTCGAACTCAAGACAACGCCTCAAGCGAGAAAGAAGTCCCTGTC
ACTACCTGAAACCATCGAAGTTCGCCTGATAAAGAAAACTATCAAAGGGAAAGAAGTGAGTATCTTGACCTCGATGACTG
ATCATCGTCGTTATCCGCCAGCGGAAATAGCAGAGCTTTACAGTCATAGATGGGAAATCGAAGTGGGATATCGGGAAATG
AAGTCTTCACTTCTGAACAACGAATTCACACTGAGAAGCAAGAAGCCAGAGATGGTAAAACAAGAACTATGGGGCTTATT
GCTTAGCTATAACATTATTAGATATCAGATGGTTAACATGGCTAAAGCTGTGCCTGGCATCTACCCCAACCAACTGAGCT
TCACAACGTGTGCTCACTCTATCATTCACGTAATTTTGGGGTTCTGGTTGGAGTCAGCGGGAACAATCCCTAAGCGCATT
ACTCACTTGCAAGAAGAGGCGATACACCATGTCTTGTCCATTAAACGAGAAGAGCGGATATATCCGAGAGCAATAAAACC
AAAGGCAAAGAAATACCCCAATAAAAAAGCCAGTCAGCTTAACTGA

Upstream 100 bases:

>100_bases
AAGGCTTAATGCCGATCAGTTAAGAGATAAATGATCGGTTGAACGATCCAGCAGATGGCTTATAAAGGCTCTAAGTTTCT
AAAACTTTGAGCCTTTTATT

Downstream 100 bases:

>100_bases
CTGGCATTAAGCCAAGGCTCCCATTTTTCGTTCGCGTTGCCACCTAGTAGTAGGCTTCCACCACCTCAATAAAACGAGGC
AATTCTTCTGCGGTTAAGGC

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVAMSLYRQEPLWSIVSKAQLML
PGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETADHPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGS
FPQVRMVCQMELTSHMLVASAFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF
TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPPAEIAELYSHRWEIEVGYREM
KSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNMAKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRI
THLQEEAIHHVLSIKREERIYPRAIKPKAKKYPNKKASQLN

Sequences:

>Translated_441_residues
MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVAMSLYRQEPLWSIVSKAQLML
PGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETADHPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGS
FPQVRMVCQMELTSHMLVASAFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF
TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPPAEIAELYSHRWEIEVGYREM
KSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNMAKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRI
THLQEEAIHHVLSIKREERIYPRAIKPKAKKYPNKKASQLN
>Mature_441_residues
MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVAMSLYRQEPLWSIVSKAQLML
PGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETADHPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGS
FPQVRMVCQMELTSHMLVASAFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF
TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPPAEIAELYSHRWEIEVGYREM
KSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNMAKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRI
THLQEEAIHHVLSIKREERIYPRAIKPKAKKYPNKKASQLN

Specific function: Involved in the transposition of the insertion sequence IS4 [H]

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1790729, Length=434, Percent_Identity=50, Blast_Score=457, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 50536; Mature: 50536

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVA
CCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH
MSLYRQEPLWSIVSKAQLMLPGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETAD
HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
HPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGSFPQVRMVCQMELTSHMLVAS
CCCCCCEEEEEECCEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF
HHHHCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHH
TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPP
HHHHHCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCH
AEIAELYSHRWEIEVGYREMKSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNM
HHHHHHHHCCCEEEECHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRITHLQEEAIHHVLSIKREERI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
YPRAIKPKAKKYPNKKASQLN
CCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MQLTTALTLANRYAPNTEQLGKLSDILCPDFINQCLDASGVATIRKRRIPLDMAVWAVVA
CCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH
MSLYRQEPLWSIVSKAQLMLPGKRSLVAPSAIVQARQRLGADAMKEVFHQSQSLWNETAD
HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
HPTWCGLKLLAVDGVVWRTPDTKENRDAFQSASNQNGEGSFPQVRMVCQMELTSHMLVAS
CCCCCCEEEEEECCEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AFASYKTNEMILAEQLIETTPDYSLTMFDRGFYSLSLLHRWANTGNERHWLMPMRKNTQF
HHHHCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHH
TEVRKLGRNDRIVELKTTPQARKKSLSLPETIEVRLIKKTIKGKEVSILTSMTDHRRYPP
HHHHHCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCH
AEIAELYSHRWEIEVGYREMKSSLLNNEFTLRSKKPEMVKQELWGLLLSYNIIRYQMVNM
HHHHHHHHCCCEEEECHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKAVPGIYPNQLSFTTCAHSIIHVILGFWLESAGTIPKRITHLQEEAIHHVLSIKREERI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
YPRAIKPKAKKYPNKKASQLN
CCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6268937; 7610040; 9278503 [H]