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The map label for this gene is yibP [H]

Identifier: 37681274

GI number: 37681274

Start: 3172325

End: 3173488

Strand: Direct

Name: yibP [H]

Synonym: VV3090

Alternate gene names: 37681274

Gene position: 3172325-3173488 (Clockwise)

Preceding gene: 37681273

Following gene: 37681275

Centisome position: 94.57

GC content: 47.16

Gene sequence:

>1164_bases
ATGCTTATTTCATTGATAGCTCAGGAAAGAACGTACGTGGCAAAACAGAAAACCAACAAATCAGGCTTTTTTTTCCTTTC
CACCTGCGTTCTTCTTACTTTTCTGAGCTTCCCGACCTCCGCGGCGAGTCCAAGTGAGCTACAAGGGGTCAAAAATGAAA
TTTCTCGCCAGCAAAAAGCCTTATCGAATCAAGAGAAGCAGCTCGACGAGTTGCAAAAATCGCTGCGCAGCCAAGAAACA
AGCATCGCGCAATTAGAGAAAGAGATTAAGCAAACTAAGCAAGCACTGGCTACGGCAAAAGCGAATGTGGGGCAGTTGCA
ACGCAAAATGGATGAACTTGAAAGCCAAAAGAAAGCGCAAACTGAACGCTTAGAAACCCTCATCCAGACCTACTATGTCA
CCCAAAGAGCCAATGCCTCTGCCTCATTACTGCAACAGGGCGTCGAAGAAGATCGCATCAGCCAATATTTCCAGCATCTC
GCCAAAGCGAGAGCCGAAACCATCAACGAATTAGAATCCACCAAGAAACAACTTGAACAAAGTCAGCAGCAGTTGCTGAA
TGAGCAAAGTCAGATCGAATCTTTACTCAAGCAACAATCGACGAAACACGAACAACTGGCGAAAACTCAAGGCCAGCGTA
AAAAGACACTCGGTAACATCAAACAAAGTATTTCCAGCGACAAAAACTACCTCGCAGAGCTGCAGCGTAATGAAACGCGT
CTCAAAGCAGAAATTGCTAAAGCGGCTAAACGCAATGCCATTCCTATGGACGGTTTGGCCAAACAAACCGGGAAGCTCCC
TTGGCCATTAAAAGGCTCAATACTGCACCAATTCGGAACCAAACAGACAGGACAAATCAACTGGAAAGGCATTGTTATCG
CAGCTCGCTATGGTGAACAAGTCAAGTCGGTTTACCCTGGTACGGTGGTATTTGCTGAGTATTTAAGAGGCTATGGCCTC
GTGGTGTTGATAGACCACGGCAAAGGCGACATGACCTTGTATGGCTACAACCAAGCATTGTTGAAAAAAGAAGGCGACAA
AGTCACCGCTGGCGAAGTGATCGCCCTTGCTGGCGACACGGGCGGGCAAGATCGAGCTTCACTTTACTTCGAAATTCGCC
GCAATAGTGAAGCGCAAAACCCGCGTAACTGGCTGGTCCGTTGA

Upstream 100 bases:

>100_bases
AATCCGACAAGCCTTCTCTCGATATGGATCAAGGCTTTAACGGGAAATACCCTAACTTCATTGACGGTGACGGCATCTAA
CAGCGCGCCTAACAAGCGCA

Downstream 100 bases:

>100_bases
GGTGTGAACCTCAATCCTTGCCAACAAAAATGGGAGCCAAGGCTTAATGCCGATCAGTTAAGAGATAAATGATCGGTTGA
ACGATCCAGCAGATGGCTTA

Product: membrane-bound metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTFLSFPTSAASPSELQGVKNEISRQQKALSNQEKQLDELQKSLRSQET
SIAQLEKEIKQTKQALATAKANVGQLQRKMDELESQKKAQTERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHL
AKARAETINELESTKKQLEQSQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
LKAEIAKAAKRNAIPMDGLAKQTGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQVKSVYPGTVVFAEYLRGYGL
VVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDTGGQDRASLYFEIRRNSEAQNPRNWLVR

Sequences:

>Translated_387_residues
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTFLSFPTSAASPSELQGVKNEISRQQKALSNQEKQLDELQKSLRSQET
SIAQLEKEIKQTKQALATAKANVGQLQRKMDELESQKKAQTERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHL
AKARAETINELESTKKQLEQSQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
LKAEIAKAAKRNAIPMDGLAKQTGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQVKSVYPGTVVFAEYLRGYGL
VVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDTGGQDRASLYFEIRRNSEAQNPRNWLVR
>Mature_387_residues
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTFLSFPTSAASPSELQGVKNEISRQQKALSNQEKQLDELQKSLRSQET
SIAQLEKEIKQTKQALATAKANVGQLQRKMDELESQKKAQTERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHL
AKARAETINELESTKKQLEQSQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
LKAEIAKAAKRNAIPMDGLAKQTGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQVKSVYPGTVVFAEYLRGYGL
VVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDTGGQDRASLYFEIRRNSEAQNPRNWLVR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=403, Percent_Identity=33.4987593052109, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=36.1344537815126, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082174, Length=121, Percent_Identity=35.5371900826446, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081989, Length=162, Percent_Identity=32.0987654320988, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 43494; Mature: 43494

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTFLSFPTSAASPSELQGVKNEISRQQKA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LSNQEKQLDELQKSLRSQETSIAQLEKEIKQTKQALATAKANVGQLQRKMDELESQKKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHLAKARAETINELESTKKQLEQ
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAEIAKAAKRNAIPMDGLAKQTGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQ
HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEHHHHH
VKSVYPGTVVFAEYLRGYGLVVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDT
HHHHCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEEECCC
GGQDRASLYFEIRRNSEAQNPRNWLVR
CCCCHHHEEEEEECCCCCCCCHHCCCC
>Mature Secondary Structure
MLISLIAQERTYVAKQKTNKSGFFFLSTCVLLTFLSFPTSAASPSELQGVKNEISRQQKA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LSNQEKQLDELQKSLRSQETSIAQLEKEIKQTKQALATAKANVGQLQRKMDELESQKKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERLETLIQTYYVTQRANASASLLQQGVEEDRISQYFQHLAKARAETINELESTKKQLEQ
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQQQLLNEQSQIESLLKQQSTKHEQLAKTQGQRKKTLGNIKQSISSDKNYLAELQRNETR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAEIAKAAKRNAIPMDGLAKQTGKLPWPLKGSILHQFGTKQTGQINWKGIVIAARYGEQ
HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEHHHHH
VKSVYPGTVVFAEYLRGYGLVVLIDHGKGDMTLYGYNQALLKKEGDKVTAGEVIALAGDT
HHHHCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEEECCC
GGQDRASLYFEIRRNSEAQNPRNWLVR
CCCCHHHEEEEEECCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]