| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is mltC [H]
Identifier: 37681070
GI number: 37681070
Start: 2936884
End: 2938023
Strand: Direct
Name: mltC [H]
Synonym: VV2886
Alternate gene names: 37681070
Gene position: 2936884-2938023 (Clockwise)
Preceding gene: 37681069
Following gene: 37681071
Centisome position: 87.55
GC content: 44.82
Gene sequence:
>1140_bases ATGAAAAAGTTTGGGTATTTTTTAGCTGCATTGCTCTTAACCGGTTGTAGCCGCGAATTTATCGAAAACATCTATGACGT CAATTACCAACCGACCAACCGCTTTGCTAAAAATCTCGCAGAGCTGCCAGGACAATTTGAAAAAGACACGGCTGCACTGG ATGCTTTGATCAACAGCTTCTCAGGCAATATTGAAAAACGCTGGGGGAGCCGAGAAATAAAAATGGCAGGCAAAAGTAAC TATGTGAAATACATAGACAATTACCTCAGCCGAGCCGATGTCAACTTTAGCAATGGCACCATCCTCATTGAGACGGTTTC ACCCACAGAACCCAAACAGCACCTGAAAAATGCCATTATCACTACCTTGCTAACTCCAGATGATCCGGCCAATGTCGATC TTTTCTCCTCCAAAGAGATCCGCTTGGAAGGGCAACCTTTTCTCTACAATCAAGTGTTGGATCAAGACAAACAAGCTATC CAGTGGAGTTGGCGCGCCAATCGCTTTGCCGATTATCTGATCGCCAATAAACTCAAGACACGTACGGTTGATTTTAAGAA AGCCTACTACGTTGAAATTCCCATGGTGGCAGACCACGTAGACAAACGCAGTTATAAATACGCCGATATCGTACGCCGCG CCTCAACTAAGTACGATATTCCCGAAGATCTGATTTACGCCATCATCAAAACCGAAAGCAGCTTCAACCCCTATGCAGTG AGCTGGGCCAACGCCTATGGTTTGATGCAAGTGGTGCCCAAAACGGCTGGGCGCGATGTGTTCAACTTGGTTAAAAATCG CAGTGGCGAACCCAGTCCGGAATATCTCTTTAACCCAGAAAACAATATTGACACCGGAACGGCTTATTTTTATCTGTTGA AAAATCGCTATCTAAAAGAGGTCAATCATCCAACATCTCTCGAATATTCGATGATTTCAGCCTACAACGGTGGCACAGGC GGGGTACTCAATACCTTTAATCGCAATGATCGCAAGCGCGCAATGCGCGATCTCAACGCATTGCAACCCAATCAAGTGTA TTGGGCATTAACCAAAAAACACCCCAATGCAGAAGCTCGCCGTTATTTGGAAAAAGTAACCAAGTTCAAGCAAGACTTTA ATCAAGGACATTCTCTTTGA
Upstream 100 bases:
>100_bases TACACACCACCGAGCAAATAATCTGGTTTTCTTCATGGTTAATCAATGACATCATAGCCAACGCTTTGGTGTCATTTTTT TAGGTTTGAATAGGTAAACG
Downstream 100 bases:
>100_bases TTACAAATGAATATTTTCTAAGCAAATGATCAATTTTTTACTTTTTTTGCAAAAAATCGGTTGACGAGGCAGGTAAAAAT CCGTTTAATAGCGCTCCGTC
Product: soluble lytic murein transglycosylase
Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]
Alternate protein names: Murein hydrolase C [H]
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKKFGYFLAALLLTGCSREFIENIYDVNYQPTNRFAKNLAELPGQFEKDTAALDALINSFSGNIEKRWGSREIKMAGKSN YVKYIDNYLSRADVNFSNGTILIETVSPTEPKQHLKNAIITTLLTPDDPANVDLFSSKEIRLEGQPFLYNQVLDQDKQAI QWSWRANRFADYLIANKLKTRTVDFKKAYYVEIPMVADHVDKRSYKYADIVRRASTKYDIPEDLIYAIIKTESSFNPYAV SWANAYGLMQVVPKTAGRDVFNLVKNRSGEPSPEYLFNPENNIDTGTAYFYLLKNRYLKEVNHPTSLEYSMISAYNGGTG GVLNTFNRNDRKRAMRDLNALQPNQVYWALTKKHPNAEARRYLEKVTKFKQDFNQGHSL
Sequences:
>Translated_379_residues MKKFGYFLAALLLTGCSREFIENIYDVNYQPTNRFAKNLAELPGQFEKDTAALDALINSFSGNIEKRWGSREIKMAGKSN YVKYIDNYLSRADVNFSNGTILIETVSPTEPKQHLKNAIITTLLTPDDPANVDLFSSKEIRLEGQPFLYNQVLDQDKQAI QWSWRANRFADYLIANKLKTRTVDFKKAYYVEIPMVADHVDKRSYKYADIVRRASTKYDIPEDLIYAIIKTESSFNPYAV SWANAYGLMQVVPKTAGRDVFNLVKNRSGEPSPEYLFNPENNIDTGTAYFYLLKNRYLKEVNHPTSLEYSMISAYNGGTG GVLNTFNRNDRKRAMRDLNALQPNQVYWALTKKHPNAEARRYLEKVTKFKQDFNQGHSL >Mature_379_residues MKKFGYFLAALLLTGCSREFIENIYDVNYQPTNRFAKNLAELPGQFEKDTAALDALINSFSGNIEKRWGSREIKMAGKSN YVKYIDNYLSRADVNFSNGTILIETVSPTEPKQHLKNAIITTLLTPDDPANVDLFSSKEIRLEGQPFLYNQVLDQDKQAI QWSWRANRFADYLIANKLKTRTVDFKKAYYVEIPMVADHVDKRSYKYADIVRRASTKYDIPEDLIYAIIKTESSFNPYAV SWANAYGLMQVVPKTAGRDVFNLVKNRSGEPSPEYLFNPENNIDTGTAYFYLLKNRYLKEVNHPTSLEYSMISAYNGGTG GVLNTFNRNDRKRAMRDLNALQPNQVYWALTKKHPNAEARRYLEKVTKFKQDFNQGHSL
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI87082191, Length=329, Percent_Identity=50.7598784194529, Blast_Score=338, Evalue=4e-94, Organism=Escherichia coli, GI87081855, Length=179, Percent_Identity=36.3128491620112, Blast_Score=115, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 - InterPro: IPR000189 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 43604; Mature: 43604
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00922 TRANSGLYCOSYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFGYFLAALLLTGCSREFIENIYDVNYQPTNRFAKNLAELPGQFEKDTAALDALINSF CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SGNIEKRWGSREIKMAGKSNYVKYIDNYLSRADVNFSNGTILIETVSPTEPKQHLKNAII CCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHH TTLLTPDDPANVDLFSSKEIRLEGQPFLYNQVLDQDKQAIQWSWRANRFADYLIANKLKT HEEECCCCCCCEEEECCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RTVDFKKAYYVEIPMVADHVDKRSYKYADIVRRASTKYDIPEDLIYAIIKTESSFNPYAV CEEECCEEEEEECCHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEE SWANAYGLMQVVPKTAGRDVFNLVKNRSGEPSPEYLFNPENNIDTGTAYFYLLKNRYLKE EHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH VNHPTSLEYSMISAYNGGTGGVLNTFNRNDRKRAMRDLNALQPNQVYWALTKKHPNAEAR CCCCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH RYLEKVTKFKQDFNQGHSL HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKFGYFLAALLLTGCSREFIENIYDVNYQPTNRFAKNLAELPGQFEKDTAALDALINSF CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SGNIEKRWGSREIKMAGKSNYVKYIDNYLSRADVNFSNGTILIETVSPTEPKQHLKNAII CCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHH TTLLTPDDPANVDLFSSKEIRLEGQPFLYNQVLDQDKQAIQWSWRANRFADYLIANKLKT HEEECCCCCCCEEEECCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RTVDFKKAYYVEIPMVADHVDKRSYKYADIVRRASTKYDIPEDLIYAIIKTESSFNPYAV CEEECCEEEEEECCHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEE SWANAYGLMQVVPKTAGRDVFNLVKNRSGEPSPEYLFNPENNIDTGTAYFYLLKNRYLKE EHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH VNHPTSLEYSMISAYNGGTGGVLNTFNRNDRKRAMRDLNALQPNQVYWALTKKHPNAEAR CCCCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH RYLEKVTKFKQDFNQGHSL HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]