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The map label for this gene is pilA [H]

Identifier: 37680962

GI number: 37680962

Start: 2833606

End: 2834088

Strand: Direct

Name: pilA [H]

Synonym: VV2778

Alternate gene names: 37680962

Gene position: 2833606-2834088 (Clockwise)

Preceding gene: 37680961

Following gene: 37680963

Centisome position: 84.47

GC content: 39.34

Gene sequence:

>483_bases
ATGATGAAGAAATTGAACAAAACCAAGAAACAACAAGGTTTTACCTTGATTGAATTAATGATAGTGGTGGGTATAATCGG
TATTTTGAGCGCTCTCGCTGTGCCTGCATATAAAAGCTATGTCATTAAAACTGAAGCCAATACGGCGGTAGGTATCCCAA
GAACACTTTTATCCAATATTGATCTATACATACAAGAAAAAGGAGCATTTCCAGAAACCGCAAACATTGCAGATGTCGGT
GGAGCAACGGATATGAGTGCTCTTGGAGGCTTAGCACTAACCAAAGATGGAACTACAGCAACAAACGGAACGCTTATTTT
CACAATTAGTAATGGACAAGCCTCACTAAATAACAAAAAAATAACTTATACAAGAACAGGTGGTGGCTGGAAATGTACAC
ACGACATTCCGACAACACTGCTAACGGAAGAGTTAAAGAGTTGCAAAGCTACCACAGCGCAACAACAAACTCCATCATCA
TAA

Upstream 100 bases:

>100_bases
AATCACTCGAGTGATGCTCTTGGTGTGATTTTCACTCATCTACTCCTTGCATAATCTAACCACAAGCTCGCGGAGCGAAT
TTGATAGATTAAAGGAAATC

Downstream 100 bases:

>100_bases
TAAATACAATATCTAAATGCACAGCAATCTTGCCACTATTCTGCGTCAGGCCAAACAACTTAGCCTAACGCAAGAGCAAG
CGTGTCGAGAGACAATACAA

Product: type IV pilin PilA

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMKKLNKTKKQQGFTLIELMIVVGIIGILSALAVPAYKSYVIKTEANTAVGIPRTLLSNIDLYIQEKGAFPETANIADVG
GATDMSALGGLALTKDGTTATNGTLIFTISNGQASLNNKKITYTRTGGGWKCTHDIPTTLLTEELKSCKATTAQQQTPSS

Sequences:

>Translated_160_residues
MMKKLNKTKKQQGFTLIELMIVVGIIGILSALAVPAYKSYVIKTEANTAVGIPRTLLSNIDLYIQEKGAFPETANIADVG
GATDMSALGGLALTKDGTTATNGTLIFTISNGQASLNNKKITYTRTGGGWKCTHDIPTTLLTEELKSCKATTAQQQTPSS
>Mature_160_residues
MMKKLNKTKKQQGFTLIELMIVVGIIGILSALAVPAYKSYVIKTEANTAVGIPRTLLSNIDLYIQEKGAFPETANIADVG
GATDMSALGGLALTKDGTTATNGTLIFTISNGQASLNNKKITYTRTGGGWKCTHDIPTTLLTEELKSCKATTAQQQTPSS

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 16940; Mature: 16940

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLNKTKKQQGFTLIELMIVVGIIGILSALAVPAYKSYVIKTEANTAVGIPRTLLSNI
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCHHHHHCCC
DLYIQEKGAFPETANIADVGGATDMSALGGLALTKDGTTATNGTLIFTISNGQASLNNKK
CEEEEECCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCCCCE
ITYTRTGGGWKCTHDIPTTLLTEELKSCKATTAQQQTPSS
EEEEECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMKKLNKTKKQQGFTLIELMIVVGIIGILSALAVPAYKSYVIKTEANTAVGIPRTLLSNI
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCHHHHHCCC
DLYIQEKGAFPETANIADVGGATDMSALGGLALTKDGTTATNGTLIFTISNGQASLNNKK
CEEEEECCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCCCCE
ITYTRTGGGWKCTHDIPTTLLTEELKSCKATTAQQQTPSS
EEEEECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]