| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37680023
Identifier: 37680023
GI number: 37680023
Start: 1859037
End: 1859345
Strand: Direct
Name: 37680023
Synonym: VV1839
Alternate gene names: NA
Gene position: 1859037-1859345 (Clockwise)
Preceding gene: 37680005
Following gene: 37680024
Centisome position: 55.42
GC content: 50.81
Gene sequence:
>309_bases ATGGCTAAACATCGTAATCCAGCGTACACCGAAGAGTTTCGCAAAGAAGCAGTTCGCCTGGCTAGTCTTCCTGGCCGAAC AGCCGTCTCCGTTGCTAAGGAGCTGGGCATCAGTGCCCAGCAAATCCGGAACTGGAAGCGCCAGTTCACACGCCTATCGG ATAAACAGTTTAACACTTTAGACGGTGTCGATTACTCGAAGAAAGAGTCCGAAGAGCTTCGAGCGCTAAGGCACGAGAAC AAGCGACTCAAAGAGGAAATGGAATTCCTAAAAAAGGTCTCGGCGTACTTCGCGAAGCAGCAAGAGTGA
Upstream 100 bases:
>100_bases TGATGATTAGAGTCCTTTATTGTCAATGAGTTATCCGAGTACCCCACGTTTAGTAGACACTTTACTAAGTTAGATCTAGG GTCTAATTGAGAGGTGATTT
Downstream 100 bases:
>100_bases AGTACGAGTTCATTGAAAGCTATACCGGCGAGTACTCGATTAGCTTAATGTGTCGTACGCTAGAGGTGAGTCGAGGTGGT TACTACAAGTGGTGTCATCA
Product: transposase and inactivated derivative
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MAKHRNPAYTEEFRKEAVRLASLPGRTAVSVAKELGISAQQIRNWKRQFTRLSDKQFNTLDGVDYSKKESEELRALRHEN KRLKEEMEFLKKVSAYFAKQQE
Sequences:
>Translated_102_residues MAKHRNPAYTEEFRKEAVRLASLPGRTAVSVAKELGISAQQIRNWKRQFTRLSDKQFNTLDGVDYSKKESEELRALRHEN KRLKEEMEFLKKVSAYFAKQQE >Mature_101_residues AKHRNPAYTEEFRKEAVRLASLPGRTAVSVAKELGISAQQIRNWKRQFTRLSDKQFNTLDGVDYSKKESEELRALRHENK RLKEEMEFLKKVSAYFAKQQE
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12017; Mature: 11886
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHRNPAYTEEFRKEAVRLASLPGRTAVSVAKELGISAQQIRNWKRQFTRLSDKQFNTL CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC DGVDYSKKESEELRALRHENKRLKEEMEFLKKVSAYFAKQQE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKHRNPAYTEEFRKEAVRLASLPGRTAVSVAKELGISAQQIRNWKRQFTRLSDKQFNTL CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC DGVDYSKKESEELRALRHENKRLKEEMEFLKKVSAYFAKQQE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA