Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679920

Identifier: 37679920

GI number: 37679920

Start: 1788930

End: 1791122

Strand: Direct

Name: 37679920

Synonym: VV1736

Alternate gene names: NA

Gene position: 1788930-1791122 (Clockwise)

Preceding gene: 37679919

Following gene: 37679922

Centisome position: 53.33

GC content: 39.63

Gene sequence:

>2193_bases
ATGCATGAACTTGCCATCATAATAAAAATATTTCTTGTTTTTAGTTTAATCAATACACTATTCAATAGTAGTAGTGATAA
AGAAGCAGCCTTAAAAGAGCGTCGGACTAAGTTGCTAAGTGTGAAGCGTGATGCAAACCTTTCTGAAGAAGAGCGTTCCG
CCCTCTCAGAGTTATATGGCTTTGATGTCGGATATTCTGAGGTTTATTACATCACTGAACCTTTTGAGGTTCATGTAATT
CCAGATGATGAAGGAAAAACGAAATTCCTCGCTTTGGCAGATTATCCGGTAGCAATATCCGATAAAGCGATATACTTCCT
TGATACTGAGGATCAACTTGCTGAAGTCGTTGTGGTTGCCGAGACAATTCTAGTCCTTCGTCTTAACGATTACTATATTG
TCGATGAAATCAATAATACTCTTGCAAATGCGCCATCACTCTTCTCTAAGGGAGCTGAAGCATATGCGCCAAGCACAACA
CAACCTGTAGAGCAAGGTATGGGGCCAGCAACGCACCCTGCCCCTCAAACCGTGCTAAAGTCTGAACGACCCGCCACCCA
AACAGAAGTTTTGTATCTATCACCTCCCTTTTACAATTTTTCCGTACCGCTAATTATAGTAGTGGCTACGAGTATTTTTG
CGTACATCAGCAAGATTGATATTGCCATTGAACCTGTATGGCTTGCTCCAGTAGTTCTGCTTACGGTAACTGTTATTGCA
CTACTGATACTTTTTTTAAAGACAAAGCCAAAATATGAACCTAGCAATATAGTGATAACGCGATATTTCGGCAAAATAGA
GTCTTTAGATAGCTCTGATCGAAAAACTTGGCTGACATTCACTGAACCAAACGGGAAAACAAAAAAGGCTTGGATGCCAA
GCCATTGGCAAAATACGGTGAGTATTAATAAAAATGTATACTTTGAAATTGAACAGAATCAATCGACCGTTGTGCGAATA
GGTTTAAACGAAATTTCAGAACGAGATTTTGCGAAAAGAAAACCACAATATCTTACTGCTGCGGTGGGATTACTCTGCGC
TAGTTTAATCATCGCTTTCAACACAAAATTGGAATGGCGCGATGCCGCTTTTACCATGCTTAAAAATAGCGCATCCTATC
AAATTAACACCTTTCAAGATTGGGCATCGAGCGATTTGAAAGTTGGCGATCATTTATTAATCAATCAACCCCGTTTGTGT
TTAGATAGCTTTTCAAAAGATAATGCGCTTCTCTATTGCAACGCATTTAAATATGCGTTGACGGATGAAGACTTTCAAGT
GGTTCCTAATACTGAGTTGGTCGAAGAGTATAAAGATTTTATCAGCAATGAGCCAGATTATACCCCCGACGTTTCAGAAG
GAGACTACATGTTGATGATGCTGGCTTTTGAAGTAAAAAAGTCGTATTCAGTCGATAATTTAGTCATGTATAGGCGAAGT
GAGTTAGCGATATTTACTGTAAAGAGCTTAATGGAAATCGCTAATCATTTAACGAAATACTGCCCAACTGATGCAAAGAG
TGAGGGTGTTAAAACGGATAATACATTAGCTACAGGAAGCTCAACTAGAAGTACAGATTCATTGGCTGCAGATTGTTTAG
CGTTCAAACAAGAGTTTTCAGTATTATGGCGAGAGGCAACAAAAAGCCACTGTACCGACAACTGTTGGGACGAAGCATTA
CAAGGTGGCGAGTTTGCGAATGAAAAGTTACTTAAAAATAGTGATAGCCTTAAAAATTATCAAGGTAAATTACATAACCT
GAGAAGTACAATATGGCGAAACAATCATGCTTCATTGAAGTTACCAACCCCAAAGCAAAATATTCTTTCTATTCAGTGGA
TGGGTCCAACGAGTGCTGATTTGCAAGAAATAGCCATAATGAGAGCAAATCCAGATCCTGTCCATGACGATGTTAAAATA
GAGACATTGAATAGGTTAATCCAAATGCAGGCTGAAGTTGCTTATCAACGCGTTGATGCAACTATCTTGAAGGCAGTGAA
TAACGACGAAGGGCAACTTACGCTCATTTTGGCTCCCCGCATCAGCTCTAACCAAGCGATGGAGACAGTCATCAATCATT
CATTTATGGCATTGTTTGGTCTAACGATGTTGCTCCTACTCATTATGTATTGGCTTAGTAGCAGACCCCATAACAAGAGG
CGAGTTAAATCGGAAAATGCCTGGATTAGCTAG

Upstream 100 bases:

>100_bases
ATGGATGTTGATTAACACGGAAATTGCATATTTGCTTCTATCATTGGTTGAAAACTGTAAAGACAACAAATGATCAACAT
AAAAAGGACTTTATATTTAC

Downstream 100 bases:

>100_bases
CTGTAATAATCCAGACTTAATCTGGCAGTCCTTCATATCTCTTGATATGAATCATATTGCTCAAGTGGTATGCCCATATT
TATGACACGCTTTGATGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 730; Mature: 730

Protein sequence:

>730_residues
MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYGFDVGYSEVYYITEPFEVHVI
PDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVAETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTT
QPVEQGMGPATHPAPQTVLKSERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA
LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTVSINKNVYFEIEQNQSTVVRI
GLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWRDAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLC
LDSFSKDNALLYCNAFKYALTDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS
ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFSVLWREATKSHCTDNCWDEAL
QGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLKLPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKI
ETLNRLIQMQAEVAYQRVDATILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR
RVKSENAWIS

Sequences:

>Translated_730_residues
MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYGFDVGYSEVYYITEPFEVHVI
PDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVAETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTT
QPVEQGMGPATHPAPQTVLKSERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA
LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTVSINKNVYFEIEQNQSTVVRI
GLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWRDAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLC
LDSFSKDNALLYCNAFKYALTDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS
ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFSVLWREATKSHCTDNCWDEAL
QGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLKLPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKI
ETLNRLIQMQAEVAYQRVDATILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR
RVKSENAWIS
>Mature_730_residues
MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYGFDVGYSEVYYITEPFEVHVI
PDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVAETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTT
QPVEQGMGPATHPAPQTVLKSERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA
LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTVSINKNVYFEIEQNQSTVVRI
GLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWRDAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLC
LDSFSKDNALLYCNAFKYALTDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS
ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFSVLWREATKSHCTDNCWDEAL
QGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLKLPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKI
ETLNRLIQMQAEVAYQRVDATILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR
RVKSENAWIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82535; Mature: 82535

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
FDVGYSEVYYITEPFEVHVIPDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVA
CCCCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCEEECCCEEEEECCHHHHHHHHHHH
ETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTTQPVEQGMGPATHPAPQTVLK
HEEEEEEECCEEEEECHHHHHCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHC
SERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTV
HHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
SINKNVYFEIEQNQSTVVRIGLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWR
EECCEEEEEEECCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH
DAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLCLDSFSKDNALLYCNAFKYAL
HHHHHHHHCCCCEEEECHHHHCCCCCCCCCEEEECCCHHHHHCCCCCCEEEEEECEEEEE
TDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS
CCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCEEEEECC
ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFS
CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH
VLWREATKSHCTDNCWDEALQGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLK
HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
LPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKIETLNRLIQMQAEVAYQRVDA
ECCCCCCEEEEEECCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR
HHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RVKSENAWIS
HCCCCCCCCC
>Mature Secondary Structure
MHELAIIIKIFLVFSLINTLFNSSSDKEAALKERRTKLLSVKRDANLSEEERSALSELYG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
FDVGYSEVYYITEPFEVHVIPDDEGKTKFLALADYPVAISDKAIYFLDTEDQLAEVVVVA
CCCCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCEEECCCEEEEECCHHHHHHHHHHH
ETILVLRLNDYYIVDEINNTLANAPSLFSKGAEAYAPSTTQPVEQGMGPATHPAPQTVLK
HEEEEEEECCEEEEECHHHHHCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHC
SERPATQTEVLYLSPPFYNFSVPLIIVVATSIFAYISKIDIAIEPVWLAPVVLLTVTVIA
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
LLILFLKTKPKYEPSNIVITRYFGKIESLDSSDRKTWLTFTEPNGKTKKAWMPSHWQNTV
HHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
SINKNVYFEIEQNQSTVVRIGLNEISERDFAKRKPQYLTAAVGLLCASLIIAFNTKLEWR
EECCEEEEEEECCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH
DAAFTMLKNSASYQINTFQDWASSDLKVGDHLLINQPRLCLDSFSKDNALLYCNAFKYAL
HHHHHHHHCCCCEEEECHHHHCCCCCCCCCEEEECCCHHHHHCCCCCCEEEEEECEEEEE
TDEDFQVVPNTELVEEYKDFISNEPDYTPDVSEGDYMLMMLAFEVKKSYSVDNLVMYRRS
CCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCEEEEECC
ELAIFTVKSLMEIANHLTKYCPTDAKSEGVKTDNTLATGSSTRSTDSLAADCLAFKQEFS
CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH
VLWREATKSHCTDNCWDEALQGGEFANEKLLKNSDSLKNYQGKLHNLRSTIWRNNHASLK
HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
LPTPKQNILSIQWMGPTSADLQEIAIMRANPDPVHDDVKIETLNRLIQMQAEVAYQRVDA
ECCCCCCEEEEEECCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TILKAVNNDEGQLTLILAPRISSNQAMETVINHSFMALFGLTMLLLLIMYWLSSRPHNKR
HHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RVKSENAWIS
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA