| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679880
Identifier: 37679880
GI number: 37679880
Start: 1747503
End: 1749023
Strand: Direct
Name: 37679880
Synonym: VV1696
Alternate gene names: NA
Gene position: 1747503-1749023 (Clockwise)
Preceding gene: 37679879
Following gene: 37679890
Centisome position: 52.09
GC content: 42.41
Gene sequence:
>1521_bases GTGAATAAACATATTTTGTTTTGGTCTTTATCGTTATCCCTTCTTCCTACTTATGCGTATTCTAACAACTGTAAAGTCGA TGGTTATACTATTGGTTTTTTTAATGGTGTAGCCACGTCACGAAGGGACGCAAAACTAGGGTTAAGTAAAATAATAAATA CTCTTGCCATCCAACAATATCGAGGTCAACCGGTTGAATACGCTCTGTTCTACAACGACTCCAATTACAAAGAAAGGGGG ATTGATGTACTAGCCGACTTTGCTGAGACATTCGATCAACGAACTAACGAGCTGGAGCAAAAGCAGTTTGAGCGATGGGA AGCTTTTTGGGATGTCGTAAGCGGTAGAAATAACAGCCCAATCATTAAAAAAATTGACTCACTAGTAAAAGGTTTCCTTG CCTTCGTGAATGATACCTTAAGCCGAGGTATCAACGAGATTATTCATGAGTTTTTGGAAGGTTTGGCGTCTTTGGCGGGG AGTGATATCAACACTGACGAGGTTCGAATGAAACATCGTCTTCGTAATGACTCACAGACTTGGCAAGGTAAAAAACTGAT TTATTTGGCCCATTCACAGGGCAACCTTTGGGTAAATGAGTCATTCCATTATGTCAATCAGCGTTTGGGCTATGATGAAA CGAATATTAAAGTTATCCATATTGCCCCCGCTTCTCCGACGCTTAACGGGGACTACATTCTATCGGACAAAGATCATGTC ATAAACGGATTGAACTTTACTGGAATTGGTTCAGTACCGTTTCCAAACATAAGTATCCCGACAAGCGATAAAGATAGTTT GGGACATGGATTGGTGGAAATATATCTTACCAATCAACAAACCAAACAGATGATCAAAGACGCGGTAGACAAAGCGCTGG ATAGCGTCAAATCTCCAGCGATGGAAGATTACTTATTTGATATTCGCTTCGAATACTCAGAAAACTACTTGAAAGCGCAT CGTCCACCGAAAATTGCCTTTGTCGACAGTTTAGAAAGCAGGGACTATTGTGGCTTATCGAACGTAGATTATTTTTTCGA TTTCTATGGTGCATGTGGTAACTACTATCGAGCGGTTGAAGATGCTGGTAGTCCTTATATCACTAGTGAGAGAGAACTTG TTGTCTCCAAGAAGAATCCTGTACTTATTCCGCTCACCATACCTGATGGCCAACAGCCGTATCACCTTCAAGTGCAAGAA TGCCTTGCTATTCCGCCAGCGGGATCTTTTCTGTTGGGTGAAATTGCAGGCATTTACGATCTTGAAGCGCCCTTCGATCT TACCGCTAAACTCGTGGTTACCGATCGATTTGGACGAGAGTATGATATTGATGACAGAGATGTCAGCCCGCACATAGAAG GTGGGTACCTTAAGTGTGCTGGTACCGGGTCTTTCAGTGAACTGGTAGCGATACAATCTGGGTATAGCGATGATGAAAAA CGGTACCTTAAGACCGAGCAGCTTACTGGTACGTATGAGTTGAGTGCCCAAAAAATCTGGCATCATTGCGGAGGACATTG A
Upstream 100 bases:
>100_bases TTGACCTACAATACGAAAAAGAGAACGTTAGCGTTCTTGTCTTACAATCGATTGTTAAATGGTAGTACATCAGTAATGTT AGCCCCAGAGGCAACGTATT
Downstream 100 bases:
>100_bases AAAAATCCCCTCAGTTGAGGGGATTTTGCTATTTCTCTGTTTGCTCTTTTCTATAAGTTTGGGCCCGTCGATGGTCTATG CGGTTGATTGTTGCTTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQYRGQPVEYALFYNDSNYKERG IDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSPIIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAG SDINTDEVRMKHRLRNDSQTWQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPAMEDYLFDIRFEYSENYLKAH RPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVEDAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQE CLAIPPAGSFLLGEIAGIYDLEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK RYLKTEQLTGTYELSAQKIWHHCGGH
Sequences:
>Translated_506_residues MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQYRGQPVEYALFYNDSNYKERG IDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSPIIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAG SDINTDEVRMKHRLRNDSQTWQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPAMEDYLFDIRFEYSENYLKAH RPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVEDAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQE CLAIPPAGSFLLGEIAGIYDLEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK RYLKTEQLTGTYELSAQKIWHHCGGH >Mature_506_residues MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQYRGQPVEYALFYNDSNYKERG IDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSPIIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAG SDINTDEVRMKHRLRNDSQTWQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPAMEDYLFDIRFEYSENYLKAH RPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVEDAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQE CLAIPPAGSFLLGEIAGIYDLEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK RYLKTEQLTGTYELSAQKIWHHCGGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57161; Mature: 57161
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQY CCCEEEEEEEEEEHEEEEEECCCCEECEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH RGQPVEYALFYNDSNYKERGIDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSP CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAGSDINTDEVRMKHRLRNDSQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC WQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV CCCCEEEEEEECCCCEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCCHHH INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC MEDYLFDIRFEYSENYLKAHRPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVE HHHEEEEEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQECLAIPPAGSFLLGEIAGIYD HCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEHHHHHCCCCCCCHHHHHHCCEEE LEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHH RYLKTEQLTGTYELSAQKIWHHCGGH HHHHHHHCCCEEEHHHHHHHHHCCCC >Mature Secondary Structure MNKHILFWSLSLSLLPTYAYSNNCKVDGYTIGFFNGVATSRRDAKLGLSKIINTLAIQQY CCCEEEEEEEEEEHEEEEEECCCCEECEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH RGQPVEYALFYNDSNYKERGIDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSP CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAGSDINTDEVRMKHRLRNDSQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC WQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV CCCCEEEEEEECCCCEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCCHHH INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC MEDYLFDIRFEYSENYLKAHRPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVE HHHEEEEEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQECLAIPPAGSFLLGEIAGIYD HCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEHHHHHCCCCCCCHHHHHHCCEEE LEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHH RYLKTEQLTGTYELSAQKIWHHCGGH HHHHHHHCCCEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA