| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is zwf [H]
Identifier: 37679789
GI number: 37679789
Start: 1650475
End: 1652055
Strand: Direct
Name: zwf [H]
Synonym: VV1605
Alternate gene names: 37679789
Gene position: 1650475-1652055 (Clockwise)
Preceding gene: 37679788
Following gene: 37679790
Centisome position: 49.2
GC content: 46.74
Gene sequence:
>1581_bases GTGTCACTGATAGGGTGGGCTCATCCTTTAAGCCGTATCCAGGCACACAACAAGTACCTCGTTTTTAAGGGAAAGATGAT GGTAATACCAGAAAACAGCAGCATCGTAATTTTTGGTGCTTCAGGTGATTTAACATATCGCAAGTTGATCCCTGCTTTAT ACCACCTCTACGCAAGTAAGCAGCTACCAGAAAACTTTGCTATTTTAGGTGTCAGCCGCACTGAATACAGCGATGAATCT TATCGCGAAAAGTTAAAGCGCTCTCTTCAGGAAATGGAGAAAACGGAACCAGCTATTCTGGATTCATTTATCGACCATCT TCACTATCAAGCCATCAACACGTCAGACACACAAGACTACGCGAAGTTGGTTGTACGTTTAGACGAATTGGCCGCTCAAT ACCAGTTCGAACAACGTAATACACTGTTTTATCTTGCCACACCGCCAAGCCTTTACAGTGTCATTCCTTCAAGCCTTGCT CATCACGGTCTTAACAGTGAAGAGGATGGTTGGAAACGGCTGATCATTGAAAAACCGTTTGGTTATGATTTGGCTTCGGC ACGTCAGCTCGACAAAGAAATACACGATTGCTTCCAAGAGCATCAGATCTATCGCATCGACCACTACCTTGGAAAAGAGA CCGTGCAAAACTTACTTGTTTTCCGTTTCTCTAACGCCATGTTTGAACCTCTGTGGAACCGCAACTTCATTGATTATGTG GAAATCACAGGTGCCGAATTCCTTGGCGTGGAAGAGCGTGGCGGTTATTACGACGGCTCCGGCGCTGTGCGCGATATGTT CCAAAACCATCTACTGCAAGTATTGGCAATGGTGGGCATGGAACCGCCTGCACAAATTAATGCCGATTCCATGCGTGATG AAGTAGTGAAAGTTCTGCAGTGTTTAAAACCGCTTGAGGAAGATGATCTGCGTAACAACCTAGTTTTGGGTCAATACACA GCATCAGACGTGCGCGGACAACATCTGCTTGGCTACCGTGAAGAAAACGGCGTAGCGGACGATTCTCGTACTGAGACTTA CATTGGTCTTAAAGCGTACATCAATAACTGGCGTTGGAATGGCGTGCCATTCTACGTGCGCACGGGTAAGCGTCTTCCAA CTCGCGTAACAGAAGTGGTTATCCACTTCAAACAAACACCGCATCCGGTATTTGGCCAAAACGCCCCAGAAAACAAACTG ATCATTCGTATTCAGCCTGATGAAGGCATTCAAATGAGCTTCGGTTTGAAAGAACCTGGTGCAGGCTTTAAAGCGAAAGA AGTGAAGATGAACTTCCATTATGCTTCGTTGCAAGAGACGCAAATGCTGACCGCCTATGAGCGTCTGCTTCTTGATGCGT TAAACGGCGATGCAACGCTGTTTGCTCGCAGCGATGCGGTCGAAGCGTGTTGGAAATACGTTCAACCTATCCTCGATTTC AAACAAGATCCACAAGCACTCTTTGGTTATGCCTGCGGCACTTGGGGGCCAAAAGAGTCAGACGATTTGCTGCAGCGTGA CGATCGCGCGTGGCGTTTCCCATGCAAAAACCTAACAGATACGGACTACTGCGAACTATGA
Upstream 100 bases:
>100_bases CCCCGTGTCGGGCAAATCATTCTTATTACCAACCCACACTCACTGTTTTGTAAGGTTTTGTCTATTAGTGGAATAGGCAG GGCCGATTATCAATTTTTAG
Downstream 100 bases:
>100_bases TCAATCACAAGATCTACCAAACAGCAGAGCAGGTAGTAGAAAGCCTAGCAAACGACATGAAAGCGTTTAGCGAAATGGGC CGACCTGTTCATATCTCACT
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MSLIGWAHPLSRIQAHNKYLVFKGKMMVIPENSSIVIFGASGDLTYRKLIPALYHLYASKQLPENFAILGVSRTEYSDES YREKLKRSLQEMEKTEPAILDSFIDHLHYQAINTSDTQDYAKLVVRLDELAAQYQFEQRNTLFYLATPPSLYSVIPSSLA HHGLNSEEDGWKRLIIEKPFGYDLASARQLDKEIHDCFQEHQIYRIDHYLGKETVQNLLVFRFSNAMFEPLWNRNFIDYV EITGAEFLGVEERGGYYDGSGAVRDMFQNHLLQVLAMVGMEPPAQINADSMRDEVVKVLQCLKPLEEDDLRNNLVLGQYT ASDVRGQHLLGYREENGVADDSRTETYIGLKAYINNWRWNGVPFYVRTGKRLPTRVTEVVIHFKQTPHPVFGQNAPENKL IIRIQPDEGIQMSFGLKEPGAGFKAKEVKMNFHYASLQETQMLTAYERLLLDALNGDATLFARSDAVEACWKYVQPILDF KQDPQALFGYACGTWGPKESDDLLQRDDRAWRFPCKNLTDTDYCEL
Sequences:
>Translated_526_residues MSLIGWAHPLSRIQAHNKYLVFKGKMMVIPENSSIVIFGASGDLTYRKLIPALYHLYASKQLPENFAILGVSRTEYSDES YREKLKRSLQEMEKTEPAILDSFIDHLHYQAINTSDTQDYAKLVVRLDELAAQYQFEQRNTLFYLATPPSLYSVIPSSLA HHGLNSEEDGWKRLIIEKPFGYDLASARQLDKEIHDCFQEHQIYRIDHYLGKETVQNLLVFRFSNAMFEPLWNRNFIDYV EITGAEFLGVEERGGYYDGSGAVRDMFQNHLLQVLAMVGMEPPAQINADSMRDEVVKVLQCLKPLEEDDLRNNLVLGQYT ASDVRGQHLLGYREENGVADDSRTETYIGLKAYINNWRWNGVPFYVRTGKRLPTRVTEVVIHFKQTPHPVFGQNAPENKL IIRIQPDEGIQMSFGLKEPGAGFKAKEVKMNFHYASLQETQMLTAYERLLLDALNGDATLFARSDAVEACWKYVQPILDF KQDPQALFGYACGTWGPKESDDLLQRDDRAWRFPCKNLTDTDYCEL >Mature_525_residues SLIGWAHPLSRIQAHNKYLVFKGKMMVIPENSSIVIFGASGDLTYRKLIPALYHLYASKQLPENFAILGVSRTEYSDESY REKLKRSLQEMEKTEPAILDSFIDHLHYQAINTSDTQDYAKLVVRLDELAAQYQFEQRNTLFYLATPPSLYSVIPSSLAH HGLNSEEDGWKRLIIEKPFGYDLASARQLDKEIHDCFQEHQIYRIDHYLGKETVQNLLVFRFSNAMFEPLWNRNFIDYVE ITGAEFLGVEERGGYYDGSGAVRDMFQNHLLQVLAMVGMEPPAQINADSMRDEVVKVLQCLKPLEEDDLRNNLVLGQYTA SDVRGQHLLGYREENGVADDSRTETYIGLKAYINNWRWNGVPFYVRTGKRLPTRVTEVVIHFKQTPHPVFGQNAPENKLI IRIQPDEGIQMSFGLKEPGAGFKAKEVKMNFHYASLQETQMLTAYERLLLDALNGDATLFARSDAVEACWKYVQPILDFK QDPQALFGYACGTWGPKESDDLLQRDDRAWRFPCKNLTDTDYCEL
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=502, Percent_Identity=38.0478087649402, Blast_Score=336, Evalue=3e-92, Organism=Homo sapiens, GI108773793, Length=489, Percent_Identity=38.241308793456, Blast_Score=336, Evalue=3e-92, Organism=Homo sapiens, GI52145310, Length=363, Percent_Identity=31.6804407713499, Blast_Score=169, Evalue=7e-42, Organism=Escherichia coli, GI1788158, Length=486, Percent_Identity=41.7695473251029, Blast_Score=396, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17538218, Length=476, Percent_Identity=37.8151260504202, Blast_Score=339, Evalue=2e-93, Organism=Saccharomyces cerevisiae, GI6324088, Length=484, Percent_Identity=36.7768595041322, Blast_Score=303, Evalue=6e-83, Organism=Drosophila melanogaster, GI24643350, Length=488, Percent_Identity=37.9098360655738, Blast_Score=300, Evalue=1e-81, Organism=Drosophila melanogaster, GI24643352, Length=488, Percent_Identity=37.9098360655738, Blast_Score=300, Evalue=2e-81, Organism=Drosophila melanogaster, GI221513548, Length=473, Percent_Identity=30.8668076109937, Blast_Score=220, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 60460; Mature: 60329
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIGWAHPLSRIQAHNKYLVFKGKMMVIPENSSIVIFGASGDLTYRKLIPALYHLYASK CCCCCHHHHHHHHHCCCCEEEEECEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHH QLPENFAILGVSRTEYSDESYREKLKRSLQEMEKTEPAILDSFIDHLHYQAINTSDTQDY CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHH AKLVVRLDELAAQYQFEQRNTLFYLATPPSLYSVIPSSLAHHGLNSEEDGWKRLIIEKPF HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC GYDLASARQLDKEIHDCFQEHQIYRIDHYLGKETVQNLLVFRFSNAMFEPLWNRNFIDYV CCCHHHHHHHHHHHHHHHHHCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE EITGAEFLGVEERGGYYDGSGAVRDMFQNHLLQVLAMVGMEPPAQINADSMRDEVVKVLQ EECCCCEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH CLKPLEEDDLRNNLVLGQYTASDVRGQHLLGYREENGVADDSRTETYIGLKAYINNWRWN HHCCCCHHHHHCCEEEEECCHHHCCCCHHCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCC GVPFYVRTGKRLPTRVTEVVIHFKQTPHPVFGQNAPENKLIIRIQPDEGIQMSFGLKEPG CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCC AGFKAKEVKMNFHYASLQETQMLTAYERLLLDALNGDATLFARSDAVEACWKYVQPILDF CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC KQDPQALFGYACGTWGPKESDDLLQRDDRAWRFPCKNLTDTDYCEL CCCHHHHHHHHCCCCCCCCCHHHHHCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure SLIGWAHPLSRIQAHNKYLVFKGKMMVIPENSSIVIFGASGDLTYRKLIPALYHLYASK CCCCHHHHHHHHHCCCCEEEEECEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHH QLPENFAILGVSRTEYSDESYREKLKRSLQEMEKTEPAILDSFIDHLHYQAINTSDTQDY CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHH AKLVVRLDELAAQYQFEQRNTLFYLATPPSLYSVIPSSLAHHGLNSEEDGWKRLIIEKPF HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC GYDLASARQLDKEIHDCFQEHQIYRIDHYLGKETVQNLLVFRFSNAMFEPLWNRNFIDYV CCCHHHHHHHHHHHHHHHHHCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE EITGAEFLGVEERGGYYDGSGAVRDMFQNHLLQVLAMVGMEPPAQINADSMRDEVVKVLQ EECCCCEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH CLKPLEEDDLRNNLVLGQYTASDVRGQHLLGYREENGVADDSRTETYIGLKAYINNWRWN HHCCCCHHHHHCCEEEEECCHHHCCCCHHCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCC GVPFYVRTGKRLPTRVTEVVIHFKQTPHPVFGQNAPENKLIIRIQPDEGIQMSFGLKEPG CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCC AGFKAKEVKMNFHYASLQETQMLTAYERLLLDALNGDATLFARSDAVEACWKYVQPILDF CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC KQDPQALFGYACGTWGPKESDDLLQRDDRAWRFPCKNLTDTDYCEL CCCHHHHHHHHCCCCCCCCCHHHHHCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]