BacMap

Definition	Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession	NC_005139
Length	3,354,505

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The map label for this gene is gabD [H]

Identifier: 37679773

GI number: 37679773

Start: 1630941

End: 1632392

Strand: Direct

Name: gabD [H]

Synonym: VV1589

Alternate gene names: 37679773

Gene position: 1630941-1632392 (Clockwise)

Preceding gene: 37679772

Following gene: 37679775

Centisome position: 48.62

GC content: 50.76

Gene sequence:

>1452_bases
ATGAACTTAAATTACCCAGAGCTGTTTCAGCAGCGCTGCTACATCGACGGTCAGTGGGTTGCTGAAAGTGGTCAAACTCA
AGCCGTAACGAATCCTTCTACTGGTAAAGTGATTGGTGAAATCCCCGTTTTTGGCGAGCAGCAGGCGAAAGAGTGTATTA
CTGCTGCGCAAGCCGCGTTCGAGCTATGGAAAAAGACCACAGCAGACTACAGAGCGGATGTATTGCGCAGATGGTACGAG
TTAATGATGGTCAATATTGACGACTTAGCGGCGATTTTAACTCTGGAGCAAGGTAAACCCTTTACCGAAGCGAAAGGTGA
AATCACTTATGCGGCAAGCTTTGTGCAGTGGTACAGCGAAGAAGCGCGTCGTGCGTATGGTGAGATCATTCCAAGCCACC
GCGAAAACGGCAAGATCGTCGTAACCAAAGAGCCAATTGGCGTGGTTGCCGCGATTACACCGTGGAACTTCCCTGCGGCG
ATGATCACGCGTAAAGCGGCACCAGCATTTGCGGCAGGTTGCTCTATGGTGCTAAAACCAGCACAAGAAACGCCGTTTAC
CGCGTTGGCATTGGCTAAGCTAGCGGAAGATGCCGGACTGCCAAAAGGTTTGTTCAACGTGATCACGGGTGATTCACGTT
CGATCGGCGGTGTGTTTACCAGCGATAAGCGTGTGCGTAAAGTCTCGTTCACGGGCTCGACCAATGTAGGCAAAATCCTG
ATGAACAAATCTGCTTCAACCATCAAAAAACTGGCGTTGGAGTTGGGTGGCAATGCGCCGTTTATCGTATTCGAAGACGC
CGATATTGACGCTGCGGTTGAAGGTGCAATGATCGCTAAGTTCCGCAATGCGGGTCAGACTTGTGTCTGTGCTAACCGCC
TGTTTGTCCATCATGCGGTGTACGATGAGTTTGCTGAAAAGCTGGCCAACAGAGTGAAACAACTCAAAGTTGGTGATGGC
TTTGCTGATGGCGTTGCAATTGGCCCTCTGATTAACAGCAGTTCGGTTGCAAAAGTACAAGAGCATGTTGACGATGCGGT
TGCAAAAGGCGCAAAAGTGCTCTGTGGTGGATTGCTTAATGATGAGCAACTGTTTGTCGCACCTTATGTGTTAACCGACA
TGAGTGACGACATGCTGGTCGCAGAGGAAGAGACGTTTGGCCCGGTAGCGCCGCTGTTTAGGTTTAAAGACGAAGCGGAA
GTGCTTGAACGCGCGAACGATACGGAATCTGGCTTAGCAGGCTACTTCTACACTCGCTCACTTGGTCGTGCTTGGCGTGT
CGCAGATGCGCTAGAAGTCGGTATGGTGGGGATCAACGAAGGGTTGATTTCGACTGCGGCTGCACCGTTTGGCGGGATCA
AAGAGTCTGGGCTTGGGCGAGAAGGTTCTCGTCATGGTATGGACGAGTACATGGAAATGAAGTACATGTTGATGGGTGGC
TTGGATAGCTGA

Upstream 100 bases:

>100_bases
CTGGGATCAATACCAAGGCGAAAGCACGGTGATCACCGAGTACTTCCCAAGCTCAGGTACCGGTCAAGTTAACGTCGTGT
TTGAGGTTACGGAGTAAGAC

Downstream 100 bases:

>100_bases
ACCTTCCCATATCCTTGAGAATGCAAAAAGAGATAACGACTTAGTCGCTATCTCTTTTTTTGTTGATTCGAAAGTCAGAC
GCGGTTTCTCCAACCTGTTT

Product: NAD-dependent aldehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MNLNYPELFQQRCYIDGQWVAESGQTQAVTNPSTGKVIGEIPVFGEQQAKECITAAQAAFELWKKTTADYRADVLRRWYE
LMMVNIDDLAAILTLEQGKPFTEAKGEITYAASFVQWYSEEARRAYGEIIPSHRENGKIVVTKEPIGVVAAITPWNFPAA
MITRKAAPAFAAGCSMVLKPAQETPFTALALAKLAEDAGLPKGLFNVITGDSRSIGGVFTSDKRVRKVSFTGSTNVGKIL
MNKSASTIKKLALELGGNAPFIVFEDADIDAAVEGAMIAKFRNAGQTCVCANRLFVHHAVYDEFAEKLANRVKQLKVGDG
FADGVAIGPLINSSSVAKVQEHVDDAVAKGAKVLCGGLLNDEQLFVAPYVLTDMSDDMLVAEEETFGPVAPLFRFKDEAE
VLERANDTESGLAGYFYTRSLGRAWRVADALEVGMVGINEGLISTAAAPFGGIKESGLGREGSRHGMDEYMEMKYMLMGG
LDS

Sequences:

>Translated_483_residues
MNLNYPELFQQRCYIDGQWVAESGQTQAVTNPSTGKVIGEIPVFGEQQAKECITAAQAAFELWKKTTADYRADVLRRWYE
LMMVNIDDLAAILTLEQGKPFTEAKGEITYAASFVQWYSEEARRAYGEIIPSHRENGKIVVTKEPIGVVAAITPWNFPAA
MITRKAAPAFAAGCSMVLKPAQETPFTALALAKLAEDAGLPKGLFNVITGDSRSIGGVFTSDKRVRKVSFTGSTNVGKIL
MNKSASTIKKLALELGGNAPFIVFEDADIDAAVEGAMIAKFRNAGQTCVCANRLFVHHAVYDEFAEKLANRVKQLKVGDG
FADGVAIGPLINSSSVAKVQEHVDDAVAKGAKVLCGGLLNDEQLFVAPYVLTDMSDDMLVAEEETFGPVAPLFRFKDEAE
VLERANDTESGLAGYFYTRSLGRAWRVADALEVGMVGINEGLISTAAAPFGGIKESGLGREGSRHGMDEYMEMKYMLMGG
LDS
>Mature_483_residues
MNLNYPELFQQRCYIDGQWVAESGQTQAVTNPSTGKVIGEIPVFGEQQAKECITAAQAAFELWKKTTADYRADVLRRWYE
LMMVNIDDLAAILTLEQGKPFTEAKGEITYAASFVQWYSEEARRAYGEIIPSHRENGKIVVTKEPIGVVAAITPWNFPAA
MITRKAAPAFAAGCSMVLKPAQETPFTALALAKLAEDAGLPKGLFNVITGDSRSIGGVFTSDKRVRKVSFTGSTNVGKIL
MNKSASTIKKLALELGGNAPFIVFEDADIDAAVEGAMIAKFRNAGQTCVCANRLFVHHAVYDEFAEKLANRVKQLKVGDG
FADGVAIGPLINSSSVAKVQEHVDDAVAKGAKVLCGGLLNDEQLFVAPYVLTDMSDDMLVAEEETFGPVAPLFRFKDEAE
VLERANDTESGLAGYFYTRSLGRAWRVADALEVGMVGINEGLISTAAAPFGGIKESGLGREGSRHGMDEYMEMKYMLMGG
LDS

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=481, Percent_Identity=49.8960498960499, Blast_Score=482, Evalue=1e-136,
Organism=Homo sapiens, GI25777721, Length=494, Percent_Identity=48.3805668016194, Blast_Score=471, Evalue=1e-133,
Organism=Homo sapiens, GI153266822, Length=478, Percent_Identity=39.3305439330544, Blast_Score=326, Evalue=4e-89,
Organism=Homo sapiens, GI25777730, Length=476, Percent_Identity=38.2352941176471, Blast_Score=318, Evalue=8e-87,
Organism=Homo sapiens, GI115387104, Length=473, Percent_Identity=37.8435517970402, Blast_Score=312, Evalue=6e-85,
Organism=Homo sapiens, GI25777732, Length=481, Percent_Identity=37.006237006237, Blast_Score=311, Evalue=7e-85,
Organism=Homo sapiens, GI25777724, Length=476, Percent_Identity=36.7647058823529, Blast_Score=305, Evalue=8e-83,
Organism=Homo sapiens, GI21614513, Length=475, Percent_Identity=37.4736842105263, Blast_Score=305, Evalue=8e-83,
Organism=Homo sapiens, GI238814322, Length=478, Percent_Identity=36.8200836820084, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI12007648, Length=472, Percent_Identity=33.6864406779661, Blast_Score=290, Evalue=3e-78,
Organism=Homo sapiens, GI21361176, Length=470, Percent_Identity=34.468085106383, Blast_Score=286, Evalue=2e-77,
Organism=Homo sapiens, GI25777728, Length=410, Percent_Identity=38.0487804878049, Blast_Score=278, Evalue=9e-75,
Organism=Homo sapiens, GI25777726, Length=476, Percent_Identity=33.8235294117647, Blast_Score=259, Evalue=4e-69,
Organism=Homo sapiens, GI25952152, Length=472, Percent_Identity=30.0847457627119, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI188035924, Length=470, Percent_Identity=31.063829787234, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI310128103, Length=470, Percent_Identity=31.063829787234, Blast_Score=221, Evalue=9e-58,
Organism=Homo sapiens, GI310128093, Length=468, Percent_Identity=31.1965811965812, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI310128091, Length=391, Percent_Identity=33.5038363171356, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI301500698, Length=279, Percent_Identity=37.2759856630824, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI11095441, Length=474, Percent_Identity=26.5822784810127, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI310128089, Length=326, Percent_Identity=34.3558282208589, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI223972651, Length=470, Percent_Identity=28.0851063829787, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI73466520, Length=343, Percent_Identity=27.9883381924198, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI4557303, Length=343, Percent_Identity=27.9883381924198, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI206597441, Length=427, Percent_Identity=28.1030444964871, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI206597439, Length=427, Percent_Identity=28.1030444964871, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI22907049, Length=427, Percent_Identity=28.1030444964871, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=35.9375, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI73695881, Length=342, Percent_Identity=28.3625730994152, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI73695879, Length=342, Percent_Identity=28.3625730994152, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI310128095, Length=287, Percent_Identity=33.1010452961672, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI4502043, Length=432, Percent_Identity=26.1574074074074, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI238814371, Length=432, Percent_Identity=26.1574074074074, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI71773324, Length=340, Percent_Identity=28.2352941176471, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI310128087, Length=287, Percent_Identity=30.3135888501742, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI238859541, Length=437, Percent_Identity=27.2311212814645, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI25777736, Length=428, Percent_Identity=27.3364485981308, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI25777734, Length=428, Percent_Identity=27.3364485981308, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI223972653, Length=470, Percent_Identity=25.3191489361702, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI310128099, Length=229, Percent_Identity=28.3842794759825, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI310128101, Length=229, Percent_Identity=28.3842794759825, Blast_Score=92, Evalue=1e-18,
Organism=Escherichia coli, GI1789015, Length=481, Percent_Identity=58.4199584199584, Blast_Score=597, Evalue=1e-172,
Organism=Escherichia coli, GI1786504, Length=473, Percent_Identity=38.6892177589852, Blast_Score=304, Evalue=1e-83,
Organism=Escherichia coli, GI1787684, Length=472, Percent_Identity=34.9576271186441, Blast_Score=299, Evalue=2e-82,
Organism=Escherichia coli, GI1787715, Length=473, Percent_Identity=35.9408033826639, Blast_Score=284, Evalue=8e-78,
Organism=Escherichia coli, GI87081896, Length=475, Percent_Identity=35.3684210526316, Blast_Score=278, Evalue=5e-76,
Organism=Escherichia coli, GI1787558, Length=476, Percent_Identity=32.1428571428571, Blast_Score=266, Evalue=3e-72,
Organism=Escherichia coli, GI87081926, Length=455, Percent_Identity=33.4065934065934, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI87082295, Length=479, Percent_Identity=33.6116910229645, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1788042, Length=460, Percent_Identity=31.0869565217391, Blast_Score=189, Evalue=4e-49,
Organism=Escherichia coli, GI1787250, Length=455, Percent_Identity=29.2307692307692, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI1787653, Length=432, Percent_Identity=25, Blast_Score=100, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17534119, Length=463, Percent_Identity=47.9481641468683, Blast_Score=427, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI133930964, Length=490, Percent_Identity=38.9795918367347, Blast_Score=327, Evalue=7e-90,
Organism=Caenorhabditis elegans, GI17562198, Length=479, Percent_Identity=36.7432150313152, Blast_Score=301, Evalue=4e-82,
Organism=Caenorhabditis elegans, GI25144435, Length=469, Percent_Identity=35.6076759061834, Blast_Score=293, Evalue=2e-79,
Organism=Caenorhabditis elegans, GI25143876, Length=459, Percent_Identity=35.7298474945534, Blast_Score=283, Evalue=1e-76,
Organism=Caenorhabditis elegans, GI25143874, Length=459, Percent_Identity=35.7298474945534, Blast_Score=283, Evalue=1e-76,
Organism=Caenorhabditis elegans, GI32564736, Length=411, Percent_Identity=36.4963503649635, Blast_Score=267, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI17551164, Length=473, Percent_Identity=33.4038054968288, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI71995606, Length=476, Percent_Identity=33.1932773109244, Blast_Score=234, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI115534176, Length=468, Percent_Identity=32.4786324786325, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI71995613, Length=411, Percent_Identity=33.0900243309002, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71986308, Length=436, Percent_Identity=28.8990825688073, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI32566756, Length=367, Percent_Identity=31.3351498637602, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI25146394, Length=367, Percent_Identity=31.3351498637602, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI25146391, Length=367, Percent_Identity=31.3351498637602, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17564084, Length=437, Percent_Identity=27.0022883295195, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17534447, Length=446, Percent_Identity=28.2511210762332, Blast_Score=135, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI115532534, Length=403, Percent_Identity=28.5359801488834, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI32564151, Length=401, Percent_Identity=28.428927680798, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71990744, Length=286, Percent_Identity=28.6713286713287, Blast_Score=93, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6319478, Length=483, Percent_Identity=49.8964803312629, Blast_Score=486, Evalue=1e-138,
Organism=Saccharomyces cerevisiae, GI6320917, Length=464, Percent_Identity=34.9137931034483, Blast_Score=291, Evalue=1e-79,
Organism=Saccharomyces cerevisiae, GI6324950, Length=465, Percent_Identity=34.1935483870968, Blast_Score=283, Evalue=6e-77,
Organism=Saccharomyces cerevisiae, GI6325196, Length=468, Percent_Identity=34.6153846153846, Blast_Score=271, Evalue=1e-73,
Organism=Saccharomyces cerevisiae, GI6323821, Length=477, Percent_Identity=33.9622641509434, Blast_Score=265, Evalue=2e-71,
Organism=Saccharomyces cerevisiae, GI6323822, Length=477, Percent_Identity=32.9140461215933, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6321828, Length=478, Percent_Identity=25.9414225941423, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6323757, Length=330, Percent_Identity=27.2727272727273, Blast_Score=112, Evalue=9e-26,
Organism=Saccharomyces cerevisiae, GI6321826, Length=399, Percent_Identity=27.3182957393484, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281362580, Length=484, Percent_Identity=52.6859504132231, Blast_Score=519, Evalue=1e-147,
Organism=Drosophila melanogaster, GI62472918, Length=484, Percent_Identity=52.6859504132231, Blast_Score=519, Evalue=1e-147,
Organism=Drosophila melanogaster, GI62472926, Length=484, Percent_Identity=52.6859504132231, Blast_Score=519, Evalue=1e-147,
Organism=Drosophila melanogaster, GI62472936, Length=484, Percent_Identity=52.6859504132231, Blast_Score=519, Evalue=1e-147,
Organism=Drosophila melanogaster, GI21356737, Length=484, Percent_Identity=52.6859504132231, Blast_Score=519, Evalue=1e-147,
Organism=Drosophila melanogaster, GI24650465, Length=480, Percent_Identity=37.9166666666667, Blast_Score=329, Evalue=3e-90,
Organism=Drosophila melanogaster, GI20129399, Length=482, Percent_Identity=37.1369294605809, Blast_Score=310, Evalue=2e-84,
Organism=Drosophila melanogaster, GI24585660, Length=474, Percent_Identity=35.4430379746835, Blast_Score=295, Evalue=5e-80,
Organism=Drosophila melanogaster, GI24666674, Length=470, Percent_Identity=29.1489361702128, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24638878, Length=438, Percent_Identity=26.7123287671233, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24638876, Length=438, Percent_Identity=26.7123287671233, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI281360299, Length=345, Percent_Identity=26.6666666666667, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281360297, Length=345, Percent_Identity=26.6666666666667, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281360295, Length=345, Percent_Identity=26.6666666666667, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24586250, Length=345, Percent_Identity=26.6666666666667, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281360301, Length=345, Percent_Identity=26.6666666666667, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI45552499, Length=345, Percent_Identity=26.3768115942029, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI281360303, Length=345, Percent_Identity=26.3768115942029, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24668425, Length=356, Percent_Identity=24.1573033707865, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24668417, Length=356, Percent_Identity=24.1573033707865, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24668413, Length=356, Percent_Identity=24.1573033707865, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28571802, Length=432, Percent_Identity=23.6111111111111, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28571800, Length=432, Percent_Identity=23.6111111111111, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28571806, Length=432, Percent_Identity=23.6111111111111, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28571798, Length=432, Percent_Identity=23.6111111111111, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28571796, Length=432, Percent_Identity=23.6111111111111, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28571794, Length=432, Percent_Identity=23.6111111111111, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI281360293, Length=166, Percent_Identity=30.7228915662651, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574525, Length=327, Percent_Identity=23.8532110091743, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52278; Mature: 52278

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNYPELFQQRCYIDGQWVAESGQTQAVTNPSTGKVIGEIPVFGEQQAKECITAAQAAF
CCCCHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
ELWKKTTADYRADVLRRWYELMMVNIDDLAAILTLEQGKPFTEAKGEITYAASFVQWYSE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
EARRAYGEIIPSHRENGKIVVTKEPIGVVAAITPWNFPAAMITRKAAPAFAAGCSMVLKP
HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCHHHHCCHHHCCC
AQETPFTALALAKLAEDAGLPKGLFNVITGDSRSIGGVFTSDKRVRKVSFTGSTNVGKIL
CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCCCHHE
MNKSASTIKKLALELGGNAPFIVFEDADIDAAVEGAMIAKFRNAGQTCVCANRLFVHHAV
ECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
YDEFAEKLANRVKQLKVGDGFADGVAIGPLINSSSVAKVQEHVDDAVAKGAKVLCGGLLN
HHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC
DEQLFVAPYVLTDMSDDMLVAEEETFGPVAPLFRFKDEAEVLERANDTESGLAGYFYTRS
CCCEEEECEEEECCCCCEEEECCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHH
LGRAWRVADALEVGMVGINEGLISTAAAPFGGIKESGLGREGSRHGMDEYMEMKYMLMGG
HHHHHHHHHHHHHCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
LDS
CCC
>Mature Secondary Structure
MNLNYPELFQQRCYIDGQWVAESGQTQAVTNPSTGKVIGEIPVFGEQQAKECITAAQAAF
CCCCHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
ELWKKTTADYRADVLRRWYELMMVNIDDLAAILTLEQGKPFTEAKGEITYAASFVQWYSE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
EARRAYGEIIPSHRENGKIVVTKEPIGVVAAITPWNFPAAMITRKAAPAFAAGCSMVLKP
HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCHHHHCCHHHCCC
AQETPFTALALAKLAEDAGLPKGLFNVITGDSRSIGGVFTSDKRVRKVSFTGSTNVGKIL
CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCCCHHE
MNKSASTIKKLALELGGNAPFIVFEDADIDAAVEGAMIAKFRNAGQTCVCANRLFVHHAV
ECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
YDEFAEKLANRVKQLKVGDGFADGVAIGPLINSSSVAKVQEHVDDAVAKGAKVLCGGLLN
HHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC
DEQLFVAPYVLTDMSDDMLVAEEETFGPVAPLFRFKDEAEVLERANDTESGLAGYFYTRS
CCCEEEECEEEECCCCCEEEECCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHH
LGRAWRVADALEVGMVGINEGLISTAAAPFGGIKESGLGREGSRHGMDEYMEMKYMLMGG
HHHHHHHHHHHHHCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
LDS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]