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The map label for this gene is 37679704

Identifier: 37679704

GI number: 37679704

Start: 1554962

End: 1557364

Strand: Direct

Name: 37679704

Synonym: VV1520

Alternate gene names: NA

Gene position: 1554962-1557364 (Clockwise)

Preceding gene: 37679703

Following gene: 37679705

Centisome position: 46.35

GC content: 50.27

Gene sequence:

>2403_bases
ATGCGGCGATGGTGGTATGCATTCCTATTTCTCTGTTTATGCCCGGTGAGCGGGTTTTGCACGGAGTATCGGCTTTCATT
GCCAGTTTGGTATTCCGAGACGCAATTGGGCGAATTGCCGATTGAAATTGAAGGCATGACGCTGAAATCTGTGTCAGCAG
AGGCGCTAAACGTGCTATTGGCAGACAGAATTTCCGACACTTGGTGGCGTGAACGATTTGCACACCAAAGTGGTGATTTT
ATCCACGTCGACAAATGGCACGAGCTTGGCGTTAATTTTCACCTCAACTTAGAGTCACTCACCATTGACCTCACGCTGCC
GCAAGAGGCTTTAAGCGAACGCACCTTGAATGCTTCACAACAATATCCGCCTTTTCAAGCATCGGCGAGTGGCAGTGTCA
GCTGGCTCAACAGCTTCAATTTTGCTTACAACCGTCATTGGCAAAATGAGAGTGAAAGCTGGTATTCGAGCATCGACTGG
CTAAGCCAAATGAACGTGGGTGGCGTCTCTGGCATTAATCTTCAACTGGCCAATCATCTGCAAATGAATGAGGAGAGTCA
CGACTACGTTCGCGGAGAATGGCTGGCGTTTTACGACGATCCTGATCTGCCACTTCGCGCATCGGTAGGCGATGTGTTCA
GTGGTGAGTCCGGCCATCTTTATGGATTGGCGTTGGGGGGATTTACCGTAGAAAGCCGTTATGCCGATTTACAGCCTGAA
CGCTCGATCAGCCCGCAAAGCAGCCAACAGTTGTTGCTGCAAGAATCGGCAGAAGTTGAAGTGTATGTGAATGGAGAGCG
AGTCTCCTCTGGCCGCTTAGAGGCTGGAAGGTACAACTTGCAGAACTTGATTTTAGATAATGGTGCGAACGAGATCACCG
TCGTGGTGAATTACCTTTCTGGCCGCCAAGAGGTGCTGACCTTTACTCAGTTCTACAATGCGCGCCTTCTGCAACAAGGT
TTGCTGGATTACGCCTTTTCGGTTGGTCGACCGATTGTTTACCAAGAGCAAGGCATTGAATACGAAGACGCATGGCTGGC
GACTGGCTATTTTGAGTATGGGGTAGCAGATTGGCTCACTTTGGGCAGCAATGCACTGTGGGCAAAAGAGGGAGGCGTGA
TCGGAATGTTGGCCACGGTCAGCAGTGGCTTGGGAAATATCACCAGCCGTTTTTCGTGGAGCCACAATCAAGAGCAAGGT
TGGATAGCTTCTCTGGACTATGAAAATAGCGTGATTGGTAATGGGGAGAGTCAATCTCCCAATTTGCGTCTGGCGTATGA
GTATTCCGAGCAATTTCAAAGCAAACCGTGGAGAGTGGGGGAAGAGGGGAATCAGTATTCTCAGATTTTGGGCAGCTATT
TTTGGCAAATCAGTGACGCTGTCGATCTCACGTTGTCAGGTCGCTACACCCTTTTTGACGAAAAAGAGGACGAAGTGCAG
ACCTCTGTGCTGCTTAACTGGCGTCACAAAGGGCTTACCGTTGGCCTTGGTTCAGAGTATGAAGAGTCAGCGCGATATGT
TGAGGGCGATAACCGTCTGTTGTTTACGTTTGAATACAACTGGTATTCAGAACAAGAGAGCCACCGTATTGGGGCGTCGT
ACAACAGTTTGACGGAGCGAAGCCGACTCTACTTCAATAACGAAGGGCTCAACTATGTCGATGACATTGGCGTGCGTATT
GAAGCCGAGCAGGACCAAAGCATCAAGAGTCAAAAAGCCATGCTCAGTTATACCGCCAATCGTTTCCGAGTGGAAAGCGA
GCTTGTTCGAAAACAAAACCGCCTCGATGACCAAGCGCAGTATCAAGGTTCCGTCAGGCTCGCGACCAGTCTTGGTATGG
TGGACGGTGAATGGGGATGGGGCCGAGCGCTTTCTGGGCCTTTTATGGTGGCGAGCATGCATCCCACTTTGACGGAGGCG
ACCGCGTATTTGGATGTGGATAGCGAAGGGAGAGCCACCGCGCTGGCCACACCAAGTATCAACGGTTTGATTTCGATTTC
GCAGCCCTATGGCATCAATATCATCGAGTACAACGTGCACAACGCCCCGCTTGGTTATGACTGGGGTTCGGGAAAAGTCG
ATGTGTCGCCTGGGGCTGCGACAGGGCATCGACTTATCATGGGCTCGGATGCCTCGTACACGGTAACGGGTTTTTTGACG
ACAACCGAGGGTGAAGCGATCGCCTATCGTCAAGCGAGCCTGATAGTGGACGACAAACGAATGGCGTTTTTTACCAATCA
ACAAGGTCGATTCTACATTCAAGGCATCGCACCCGGAGAGTATCGTTTAGAGCTATCAGGTTTAAGCGCTGAAACTTTGT
GGATTGTGATCCCCGAGTCAGACAACAGCTTGATCAATCTTGGTCAGATTAACGTGGTGCTGATGGACAAATCAGCACAT
TAA

Upstream 100 bases:

>100_bases
ATTGCCAATGCAATATTTGGTTCCAAATCAAAGTGTTGTCGTTAATGTGCAATCTTTGCTGGTCAAGTAATCACGGCCTT
AGGGGCCAAGTAGGTCGATC

Downstream 100 bases:

>100_bases
ATTGGTAAGGAGGAGAAGATGGGTAACTCTCTCACTCGGCGCATCACACGGGTGTTGTTTGGCACTCTGATCTGTTTTGT
TTTCCAGCCTCTGGCAGCGG

Product: P pilus assembly protein, porin PapC

Products: NA

Alternate protein names: Fimbrial Biogenesis Outer Membrane Usher Protein; P Pilus Assembly Protein Porin PapC; Type I Pili Usher Protein CsuD; Outer Membrane Usher Protein FasD

Number of amino acids: Translated: 800; Mature: 800

Protein sequence:

>800_residues
MRRWWYAFLFLCLCPVSGFCTEYRLSLPVWYSETQLGELPIEIEGMTLKSVSAEALNVLLADRISDTWWRERFAHQSGDF
IHVDKWHELGVNFHLNLESLTIDLTLPQEALSERTLNASQQYPPFQASASGSVSWLNSFNFAYNRHWQNESESWYSSIDW
LSQMNVGGVSGINLQLANHLQMNEESHDYVRGEWLAFYDDPDLPLRASVGDVFSGESGHLYGLALGGFTVESRYADLQPE
RSISPQSSQQLLLQESAEVEVYVNGERVSSGRLEAGRYNLQNLILDNGANEITVVVNYLSGRQEVLTFTQFYNARLLQQG
LLDYAFSVGRPIVYQEQGIEYEDAWLATGYFEYGVADWLTLGSNALWAKEGGVIGMLATVSSGLGNITSRFSWSHNQEQG
WIASLDYENSVIGNGESQSPNLRLAYEYSEQFQSKPWRVGEEGNQYSQILGSYFWQISDAVDLTLSGRYTLFDEKEDEVQ
TSVLLNWRHKGLTVGLGSEYEESARYVEGDNRLLFTFEYNWYSEQESHRIGASYNSLTERSRLYFNNEGLNYVDDIGVRI
EAEQDQSIKSQKAMLSYTANRFRVESELVRKQNRLDDQAQYQGSVRLATSLGMVDGEWGWGRALSGPFMVASMHPTLTEA
TAYLDVDSEGRATALATPSINGLISISQPYGINIIEYNVHNAPLGYDWGSGKVDVSPGAATGHRLIMGSDASYTVTGFLT
TTEGEAIAYRQASLIVDDKRMAFFTNQQGRFYIQGIAPGEYRLELSGLSAETLWIVIPESDNSLINLGQINVVLMDKSAH

Sequences:

>Translated_800_residues
MRRWWYAFLFLCLCPVSGFCTEYRLSLPVWYSETQLGELPIEIEGMTLKSVSAEALNVLLADRISDTWWRERFAHQSGDF
IHVDKWHELGVNFHLNLESLTIDLTLPQEALSERTLNASQQYPPFQASASGSVSWLNSFNFAYNRHWQNESESWYSSIDW
LSQMNVGGVSGINLQLANHLQMNEESHDYVRGEWLAFYDDPDLPLRASVGDVFSGESGHLYGLALGGFTVESRYADLQPE
RSISPQSSQQLLLQESAEVEVYVNGERVSSGRLEAGRYNLQNLILDNGANEITVVVNYLSGRQEVLTFTQFYNARLLQQG
LLDYAFSVGRPIVYQEQGIEYEDAWLATGYFEYGVADWLTLGSNALWAKEGGVIGMLATVSSGLGNITSRFSWSHNQEQG
WIASLDYENSVIGNGESQSPNLRLAYEYSEQFQSKPWRVGEEGNQYSQILGSYFWQISDAVDLTLSGRYTLFDEKEDEVQ
TSVLLNWRHKGLTVGLGSEYEESARYVEGDNRLLFTFEYNWYSEQESHRIGASYNSLTERSRLYFNNEGLNYVDDIGVRI
EAEQDQSIKSQKAMLSYTANRFRVESELVRKQNRLDDQAQYQGSVRLATSLGMVDGEWGWGRALSGPFMVASMHPTLTEA
TAYLDVDSEGRATALATPSINGLISISQPYGINIIEYNVHNAPLGYDWGSGKVDVSPGAATGHRLIMGSDASYTVTGFLT
TTEGEAIAYRQASLIVDDKRMAFFTNQQGRFYIQGIAPGEYRLELSGLSAETLWIVIPESDNSLINLGQINVVLMDKSAH
>Mature_800_residues
MRRWWYAFLFLCLCPVSGFCTEYRLSLPVWYSETQLGELPIEIEGMTLKSVSAEALNVLLADRISDTWWRERFAHQSGDF
IHVDKWHELGVNFHLNLESLTIDLTLPQEALSERTLNASQQYPPFQASASGSVSWLNSFNFAYNRHWQNESESWYSSIDW
LSQMNVGGVSGINLQLANHLQMNEESHDYVRGEWLAFYDDPDLPLRASVGDVFSGESGHLYGLALGGFTVESRYADLQPE
RSISPQSSQQLLLQESAEVEVYVNGERVSSGRLEAGRYNLQNLILDNGANEITVVVNYLSGRQEVLTFTQFYNARLLQQG
LLDYAFSVGRPIVYQEQGIEYEDAWLATGYFEYGVADWLTLGSNALWAKEGGVIGMLATVSSGLGNITSRFSWSHNQEQG
WIASLDYENSVIGNGESQSPNLRLAYEYSEQFQSKPWRVGEEGNQYSQILGSYFWQISDAVDLTLSGRYTLFDEKEDEVQ
TSVLLNWRHKGLTVGLGSEYEESARYVEGDNRLLFTFEYNWYSEQESHRIGASYNSLTERSRLYFNNEGLNYVDDIGVRI
EAEQDQSIKSQKAMLSYTANRFRVESELVRKQNRLDDQAQYQGSVRLATSLGMVDGEWGWGRALSGPFMVASMHPTLTEA
TAYLDVDSEGRATALATPSINGLISISQPYGINIIEYNVHNAPLGYDWGSGKVDVSPGAATGHRLIMGSDASYTVTGFLT
TTEGEAIAYRQASLIVDDKRMAFFTNQQGRFYIQGIAPGEYRLELSGLSAETLWIVIPESDNSLINLGQINVVLMDKSAH

Specific function: Unknown

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90026; Mature: 90026

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWWYAFLFLCLCPVSGFCTEYRLSLPVWYSETQLGELPIEIEGMTLKSVSAEALNVLL
CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEECEEEECCCHHHHHHHH
ADRISDTWWRERFAHQSGDFIHVDKWHELGVNFHLNLESLTIDLTLPQEALSERTLNASQ
HHHCCHHHHHHHHHCCCCCEEEEECHHHCCEEEEEEEEEEEEEEECCHHHHHHHCCCCCC
QYPPFQASASGSVSWLNSFNFAYNRHWQNESESWYSSIDWLSQMNVGGVSGINLQLANHL
CCCCCCCCCCCCEEEHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCE
QMNEESHDYVRGEWLAFYDDPDLPLRASVGDVFSGESGHLYGLALGGFTVESRYADLQPE
ECCCCCCCEECEEEEEEECCCCCCEEECCCCCCCCCCCCEEEEEECCEEEECCCCCCCCC
RSISPQSSQQLLLQESAEVEVYVNGERVSSGRLEAGRYNLQNLILDNGANEITVVVNYLS
CCCCCCCHHHHHEECCCEEEEEECCCEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECC
GRQEVLTFTQFYNARLLQQGLLDYAFSVGRPIVYQEQGIEYEDAWLATGYFEYGVADWLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECHHHHCCHHHHH
LGSNALWAKEGGVIGMLATVSSGLGNITSRFSWSHNQEQGWIASLDYENSVIGNGESQSP
CCCCEEEECCCCEEEEHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCEECCCCCCCC
NLRLAYEYSEQFQSKPWRVGEEGNQYSQILGSYFWQISDAVDLTLSGRYTLFDEKEDEVQ
CEEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCEEEEEECCEEEEECCCCHHHE
TSVLLNWRHKGLTVGLGSEYEESARYVEGDNRLLFTFEYNWYSEQESHRIGASYNSLTER
EEEEEEEECCCEEEECCCCHHHCCCEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHC
SRLYFNNEGLNYVDDIGVRIEAEQDQSIKSQKAMLSYTANRFRVESELVRKQNRLDDQAQ
CEEEECCCCCCCHHCCCEEEECCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCHHH
YQGSVRLATSLGMVDGEWGWGRALSGPFMVASMHPTLTEATAYLDVDSEGRATALATPSI
HCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCC
NGLISISQPYGINIIEYNVHNAPLGYDWGSGKVDVSPGAATGHRLIMGSDASYTVTGFLT
CCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEEEEEEE
TTEGEAIAYRQASLIVDDKRMAFFTNQQGRFYIQGIAPGEYRLELSGLSAETLWIVIPES
ECCCCEEEEEEEEEEEECCEEEEEECCCCCEEEEEECCCCEEEEEECCCEEEEEEEEECC
DNSLINLGQINVVLMDKSAH
CCCEEEECEEEEEEEECCCC
>Mature Secondary Structure
MRRWWYAFLFLCLCPVSGFCTEYRLSLPVWYSETQLGELPIEIEGMTLKSVSAEALNVLL
CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEECEEEECCCHHHHHHHH
ADRISDTWWRERFAHQSGDFIHVDKWHELGVNFHLNLESLTIDLTLPQEALSERTLNASQ
HHHCCHHHHHHHHHCCCCCEEEEECHHHCCEEEEEEEEEEEEEEECCHHHHHHHCCCCCC
QYPPFQASASGSVSWLNSFNFAYNRHWQNESESWYSSIDWLSQMNVGGVSGINLQLANHL
CCCCCCCCCCCCEEEHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCE
QMNEESHDYVRGEWLAFYDDPDLPLRASVGDVFSGESGHLYGLALGGFTVESRYADLQPE
ECCCCCCCEECEEEEEEECCCCCCEEECCCCCCCCCCCCEEEEEECCEEEECCCCCCCCC
RSISPQSSQQLLLQESAEVEVYVNGERVSSGRLEAGRYNLQNLILDNGANEITVVVNYLS
CCCCCCCHHHHHEECCCEEEEEECCCEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECC
GRQEVLTFTQFYNARLLQQGLLDYAFSVGRPIVYQEQGIEYEDAWLATGYFEYGVADWLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECHHHHCCHHHHH
LGSNALWAKEGGVIGMLATVSSGLGNITSRFSWSHNQEQGWIASLDYENSVIGNGESQSP
CCCCEEEECCCCEEEEHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCEECCCCCCCC
NLRLAYEYSEQFQSKPWRVGEEGNQYSQILGSYFWQISDAVDLTLSGRYTLFDEKEDEVQ
CEEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCEEEEEECCEEEEECCCCHHHE
TSVLLNWRHKGLTVGLGSEYEESARYVEGDNRLLFTFEYNWYSEQESHRIGASYNSLTER
EEEEEEEECCCEEEECCCCHHHCCCEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHC
SRLYFNNEGLNYVDDIGVRIEAEQDQSIKSQKAMLSYTANRFRVESELVRKQNRLDDQAQ
CEEEECCCCCCCHHCCCEEEECCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCHHH
YQGSVRLATSLGMVDGEWGWGRALSGPFMVASMHPTLTEATAYLDVDSEGRATALATPSI
HCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCC
NGLISISQPYGINIIEYNVHNAPLGYDWGSGKVDVSPGAATGHRLIMGSDASYTVTGFLT
CCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEEEEEEE
TTEGEAIAYRQASLIVDDKRMAFFTNQQGRFYIQGIAPGEYRLELSGLSAETLWIVIPES
ECCCCEEEEEEEEEEEECCEEEEEECCCCCEEEEEECCCCEEEEEECCCEEEEEEEEECC
DNSLINLGQINVVLMDKSAH
CCCEEEECEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA