| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679681
Identifier: 37679681
GI number: 37679681
Start: 1530962
End: 1532038
Strand: Direct
Name: 37679681
Synonym: VV1497
Alternate gene names: NA
Gene position: 1530962-1532038 (Clockwise)
Preceding gene: 37679680
Following gene: 37679682
Centisome position: 45.64
GC content: 49.49
Gene sequence:
>1077_bases GTGAAAATCAAAAATAATACGGACGACAGAACAGCAAGGTTTGAGAAGGGAAGAGAGATGAAATTAGCAACCAAGAAGAA TGAGCATCGCGATGGTGAGTTGATCGTCGTTAGTCGCGATTTGAGCCGTTATGTTTCCGCGACCGACATTGCGCCGACAT TGCAGCTTGCACTGGATCATTGGTCTGTGTGCGAGCCAAAGCTGAAAGAGCTTTATCAAGCGCTCAATCAAGGCGAGGTG ACGGGAAGCTTACCGTTCGAAGAGACCTTGGTCCATTCACCGTTACCGCGTGCTTATCAGTGGGCCGATGGCTCTGCATA CGTCAATCACGTGGAATTAGTGCGCAAAGCCCGTGGTGCTGAAATGCCAGAAAGCTTTTGGACAGACCCACTCATGTACC AAGGGGGCTCCGACGCCTTTATCGCACCACGTGACAACATTGAATTTGCCAGTGAAGAGTGGGGTATTGATTTTGAAGGT GAAGTGGCGGTGATCACCGGTGACGTGCCAATGGGGGCCAGTTTTGCGCAAGCAGAAGACGCGATTCGTCTCGTGATGCT GGTGAATGATGTTTCGTTGCGTGGCCTGATCCCTGCTGAACTCGCCAAAGGCTTTGGCTTCTTTCAATCCAAACCCTCTT CTGCGTTTTCTCCCGTCGCCGTTACTTTGGATGAACTGGGTGAAGCCTGGTATGAAAACAAACTTCATCTGCCGCTGATC TCAACCTACAACCATAAACCGTTTGGCAAACCGAATGCCGGCGTAGATATGACCTTTGATTTTGCCGATCTGATTGTGCA CGCGGCAAAGACGCGTCCGCTGTCTGCAGGGGCCATCATCGGGTCTGGTACGGTGTCGAATAAGCAAGGAACCGATCACG GCACGTCGATTGAAGAAGGTGGTGTTGGTTATTCGTGCATTGCCGAAATTCGTATGATTGAAACGATTCGTGATGGTCAA GCCAGCACGTCATTTATGCGTTTTGGCGATTCTATTCGCTTAGAAATGTTTGATGCGCAAGGGCAATCTATTTTTGGTGC GATTGAACAACAAGTGAGTCGTTATCAGCATAAATGA
Upstream 100 bases:
>100_bases TTCACCGACGAAGTCGCGGTGATGATTGATACGCGCCATGCATTAACGTTTGCACAAGAGCTCGACAGTGTAGAAAACAA AGAATACGTCTACAGTTGGC
Downstream 100 bases:
>100_bases GGTTGGTATGGAGACAAGTCTTAAACTCTATGGTTATTGGCGTTCGTCTGCCGCCTATCGCGTGAGGATCTGCTTAAACC TGAAGCAGCTCCGCTATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKIKNNTDDRTARFEKGREMKLATKKNEHRDGELIVVSRDLSRYVSATDIAPTLQLALDHWSVCEPKLKELYQALNQGEV TGSLPFEETLVHSPLPRAYQWADGSAYVNHVELVRKARGAEMPESFWTDPLMYQGGSDAFIAPRDNIEFASEEWGIDFEG EVAVITGDVPMGASFAQAEDAIRLVMLVNDVSLRGLIPAELAKGFGFFQSKPSSAFSPVAVTLDELGEAWYENKLHLPLI STYNHKPFGKPNAGVDMTFDFADLIVHAAKTRPLSAGAIIGSGTVSNKQGTDHGTSIEEGGVGYSCIAEIRMIETIRDGQ ASTSFMRFGDSIRLEMFDAQGQSIFGAIEQQVSRYQHK
Sequences:
>Translated_358_residues MKIKNNTDDRTARFEKGREMKLATKKNEHRDGELIVVSRDLSRYVSATDIAPTLQLALDHWSVCEPKLKELYQALNQGEV TGSLPFEETLVHSPLPRAYQWADGSAYVNHVELVRKARGAEMPESFWTDPLMYQGGSDAFIAPRDNIEFASEEWGIDFEG EVAVITGDVPMGASFAQAEDAIRLVMLVNDVSLRGLIPAELAKGFGFFQSKPSSAFSPVAVTLDELGEAWYENKLHLPLI STYNHKPFGKPNAGVDMTFDFADLIVHAAKTRPLSAGAIIGSGTVSNKQGTDHGTSIEEGGVGYSCIAEIRMIETIRDGQ ASTSFMRFGDSIRLEMFDAQGQSIFGAIEQQVSRYQHK >Mature_358_residues MKIKNNTDDRTARFEKGREMKLATKKNEHRDGELIVVSRDLSRYVSATDIAPTLQLALDHWSVCEPKLKELYQALNQGEV TGSLPFEETLVHSPLPRAYQWADGSAYVNHVELVRKARGAEMPESFWTDPLMYQGGSDAFIAPRDNIEFASEEWGIDFEG EVAVITGDVPMGASFAQAEDAIRLVMLVNDVSLRGLIPAELAKGFGFFQSKPSSAFSPVAVTLDELGEAWYENKLHLPLI STYNHKPFGKPNAGVDMTFDFADLIVHAAKTRPLSAGAIIGSGTVSNKQGTDHGTSIEEGGVGYSCIAEIRMIETIRDGQ ASTSFMRFGDSIRLEMFDAQGQSIFGAIEQQVSRYQHK
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39472; Mature: 39472
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKNNTDDRTARFEKGREMKLATKKNEHRDGELIVVSRDLSRYVSATDIAPTLQLALDH CCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHH WSVCEPKLKELYQALNQGEVTGSLPFEETLVHSPLPRAYQWADGSAYVNHVELVRKARGA CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCC EMPESFWTDPLMYQGGSDAFIAPRDNIEFASEEWGIDFEGEVAVITGDVPMGASFAQAED CCCHHHCCCCEEECCCCCCEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHH AIRLVMLVNDVSLRGLIPAELAKGFGFFQSKPSSAFSPVAVTLDELGEAWYENKLHLPLI HEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEE STYNHKPFGKPNAGVDMTFDFADLIVHAAKTRPLSAGAIIGSGTVSNKQGTDHGTSIEEG ECCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC GVGYSCIAEIRMIETIRDGQASTSFMRFGDSIRLEMFDAQGQSIFGAIEQQVSRYQHK CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIKNNTDDRTARFEKGREMKLATKKNEHRDGELIVVSRDLSRYVSATDIAPTLQLALDH CCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHH WSVCEPKLKELYQALNQGEVTGSLPFEETLVHSPLPRAYQWADGSAYVNHVELVRKARGA CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCC EMPESFWTDPLMYQGGSDAFIAPRDNIEFASEEWGIDFEGEVAVITGDVPMGASFAQAED CCCHHHCCCCEEECCCCCCEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHH AIRLVMLVNDVSLRGLIPAELAKGFGFFQSKPSSAFSPVAVTLDELGEAWYENKLHLPLI HEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEE STYNHKPFGKPNAGVDMTFDFADLIVHAAKTRPLSAGAIIGSGTVSNKQGTDHGTSIEEG ECCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC GVGYSCIAEIRMIETIRDGQASTSFMRFGDSIRLEMFDAQGQSIFGAIEQQVSRYQHK CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA