| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ttgG [H]
Identifier: 37679580
GI number: 37679580
Start: 1418775
End: 1419890
Strand: Direct
Name: ttgG [H]
Synonym: VV1396
Alternate gene names: 37679580
Gene position: 1418775-1419890 (Clockwise)
Preceding gene: 37679579
Following gene: 37679581
Centisome position: 42.29
GC content: 48.12
Gene sequence:
>1116_bases GTGAATGGGTTAAAGAGCGAGGGCTATAACGTGAATAAATGGATTGGTTTAACCGCGTTGTCCGCCGCTTTACTGTTAGC CGGATGTGGGCAACAAAATCAGCCAGCCGCTTTGGCTGACCCAAATGTCAAAATTGTCTCGTTGACTGACGAAGAGATGA TCGACAGCCTCTATTTCCCCGCGGTAGCAAACGCTGCAGAACGTTCTCACCTCAGTTTTCGAGTCGCTGGAGAAGTCAGG AGCTTATACGTCAAAGAAGGGGATAGGATAAAAAAAGGCGATGTGATTGCTGAACTTGACCCCACTGATTACCGCTTAGA CGTGGATAACGCGCAAGCAAGGTTTTCGGTAGTGGATAGCCAGTTTAAGCGCTCGGAGCCGCTGGTGAAAAAAGGGTTAC TGGCAAAATCTCAGTTTGATGAGATCGCTGCGCAGCGCCAAATTGCACTGGCTGAACTTGAATTGGCAAAACTGCGCCTC TCGTTTACACAGTTAAAAGCACCTGTTGACGGCATCATTTCACGGGTCAGTGTTGATCAATTTGAAAACGTTCAAGTTGG GCAGCAAGTGGTCAACATTCACAGTGTTGATGAAGTCGAAATCTTAATTCAGCTTCCAGATCAGCTGTATGTCAATCAGC CCACCAGAGAAAAGCTTGAGCAAGTTGATGCCTTAGTTCGCGTTCGCAGTGGAAATGAGTACTCGGCAAAAATCAAAGAG TTCACCACAGAGCCCGATCCAAAAACAGGCACTTTTACGGTCACGCTGACCATGCCGATGCCGGATAAAGAGTACATCTT AGACGGCATGGCCGTTGAGGTGACTTCACGAGGAGAAGGGGTTGGGCTGGAGTTGAACTCGGGTATTCGTGTCCCGATTG AGGCCATTTTTAATGCCGATGGGGATGAGCTGGATCGAGAGAAAAAATTTGTTTGGGTGTTAAACGCGGACAATAGCGTT AGCAAACGTCAAGTCGTTATAGGTAAAGCGTCGAAAGAGAGTGCGCAAATTATTGAGGGGCTAACGCATTCAGAGCAAGT AGTGGTGGCGGGTATCGCACGACTGCGCGACGGCATTAAAGTGAATGTGATTTCTCAGGAGGCGAACAATGAGTGA
Upstream 100 bases:
>100_bases GTGGAGCTTAACGACAAGCGCGAAGTGGTTAATGGTCTCAATGATGGTGACCAAATCATTATTTCTGGTGTCAGTGGTAT CGAGTCAGGGATAAAAGTTC
Downstream 100 bases:
>100_bases TAAACCAGTAGTGTCGCCTCAAAGCGATGATGAAGTAACGGGCGTCGCAGCGTATTTTATTCGAAATCGTGTGATTAGTT GGATGATTTCGCTGATCTTT
Product: membrane-fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFPAVANAAERSHLSFRVAGEVR SLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDSQFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRL SFTQLKAPVDGIISRVSVDQFENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNADGDELDREKKFVWVLNADNSV SKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIKVNVISQEANNE
Sequences:
>Translated_371_residues MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFPAVANAAERSHLSFRVAGEVR SLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDSQFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRL SFTQLKAPVDGIISRVSVDQFENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNADGDELDREKKFVWVLNADNSV SKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIKVNVISQEANNE >Mature_371_residues MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFPAVANAAERSHLSFRVAGEVR SLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDSQFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRL SFTQLKAPVDGIISRVSVDQFENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNADGDELDREKKFVWVLNADNSV SKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIKVNVISQEANNE
Specific function: The periplasmic linker component of an organic solvent efflux pump. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can export AMP and some antib
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082036, Length=325, Percent_Identity=25.2307692307692, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786668, Length=384, Percent_Identity=24.21875, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789929, Length=382, Percent_Identity=23.8219895287958, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789665, Length=372, Percent_Identity=24.7311827956989, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 40789; Mature: 40789
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECHHHHHHHHHHH AVANAAERSHLSFRVAGEVRSLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDS HHHCHHHHCCEEEEEECCEEEEEECCCCCEECCCEEEEECCCCEEEECCCCHHHHHHHHH QFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRLSFTQLKAPVDGIISRVSVDQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHH FENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE HCCHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHEECCCCCHHHHHHH FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNAD CCCCCCCCCCEEEEEEEECCCCHHHHHCCEEEEEECCCCCEEEEECCCCCEEEHEEECCC GDELDREKKFVWVLNADNSVSKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIK CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCE VNVISQEANNE EEEEECCCCCC >Mature Secondary Structure MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECHHHHHHHHHHH AVANAAERSHLSFRVAGEVRSLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDS HHHCHHHHCCEEEEEECCEEEEEECCCCCEECCCEEEEECCCCEEEECCCCHHHHHHHHH QFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRLSFTQLKAPVDGIISRVSVDQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHH FENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE HCCHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHEECCCCCHHHHHHH FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNAD CCCCCCCCCCEEEEEEEECCCCHHHHHCCEEEEEECCCCCEEEEECCCCCEEEHEEECCC GDELDREKKFVWVLNADNSVSKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIK CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCE VNVISQEANNE EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11395460 [H]