| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679522
Identifier: 37679522
GI number: 37679522
Start: 1365767
End: 1366282
Strand: Direct
Name: 37679522
Synonym: VV1338
Alternate gene names: NA
Gene position: 1365767-1366282 (Clockwise)
Preceding gene: 37679521
Following gene: 37679523
Centisome position: 40.71
GC content: 43.99
Gene sequence:
>516_bases ATGGCTCTTATTCTCGCCTCTGCTTGGTTCAATCTCGTTTGGTTTCTGGCGGTTATTGGCACTGAGCAGTGGCAATGGGT CACACTTTGCTTTGCCTTGATGACATTGGGGTATCAGTACCGAGTAGACCCAAAAACCTGGAAACCAACGCTTTTGATTG CTGTGGTCGGCTGCCTAGTCGACTCGCTCAATCAATATCTCTCAATTTTTCAGTTCACGTCGACTTTCTTACCCGTTTGG CTTTTAAGCTTATGGGTAGTTTTTGCTTGGTACGCTTATCAACTGAAAAGAATTTTGCTCCGTTTTGCTCCGTTTTACGT ATTAACAGTAGGTGCATTGGGGGGCTGCTTAAGTTACTACGCAGGTTATAAACTCAATGCGGTGGCTTACGGTTACAGCG TGTTGATAACGGCATCAATTGTGTTTTTAGAATGGGCAATCATCACGCTCTTTATCATTAAGGTTCTTCGCCATGATGAG AAAAGCAAGTTGTGTCATTCGGAGTACGTTTCTTAG
Upstream 100 bases:
>100_bases TTCATTCGTATGTGGCGTTACTACCTAAGTTATTGTGAGGGGGGATTCTTAGCTCGTAGCATCAGTACCGTACACATGAC GCTTCAAAGAGCCTAGTATC
Downstream 100 bases:
>100_bases TATTTTGCTAGGTTTTTCGTCTATCTCGTATGGTCAAACAGGATCGGCAGACATCGAGACTTGGCAGCAGTGGCAGACCG TTGGGGAGGCACGATTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MALILASAWFNLVWFLAVIGTEQWQWVTLCFALMTLGYQYRVDPKTWKPTLLIAVVGCLVDSLNQYLSIFQFTSTFLPVW LLSLWVVFAWYAYQLKRILLRFAPFYVLTVGALGGCLSYYAGYKLNAVAYGYSVLITASIVFLEWAIITLFIIKVLRHDE KSKLCHSEYVS
Sequences:
>Translated_171_residues MALILASAWFNLVWFLAVIGTEQWQWVTLCFALMTLGYQYRVDPKTWKPTLLIAVVGCLVDSLNQYLSIFQFTSTFLPVW LLSLWVVFAWYAYQLKRILLRFAPFYVLTVGALGGCLSYYAGYKLNAVAYGYSVLITASIVFLEWAIITLFIIKVLRHDE KSKLCHSEYVS >Mature_170_residues ALILASAWFNLVWFLAVIGTEQWQWVTLCFALMTLGYQYRVDPKTWKPTLLIAVVGCLVDSLNQYLSIFQFTSTFLPVWL LSLWVVFAWYAYQLKRILLRFAPFYVLTVGALGGCLSYYAGYKLNAVAYGYSVLITASIVFLEWAIITLFIIKVLRHDEK SKLCHSEYVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19694; Mature: 19562
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALILASAWFNLVWFLAVIGTEQWQWVTLCFALMTLGYQYRVDPKTWKPTLLIAVVGCLV CCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH DSLNQYLSIFQFTSTFLPVWLLSLWVVFAWYAYQLKRILLRFAPFYVLTVGALGGCLSYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYKLNAVAYGYSVLITASIVFLEWAIITLFIIKVLRHDEKSKLCHSEYVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure ALILASAWFNLVWFLAVIGTEQWQWVTLCFALMTLGYQYRVDPKTWKPTLLIAVVGCLV CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH DSLNQYLSIFQFTSTFLPVWLLSLWVVFAWYAYQLKRILLRFAPFYVLTVGALGGCLSYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYKLNAVAYGYSVLITASIVFLEWAIITLFIIKVLRHDEKSKLCHSEYVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA