| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is luxU [H]
Identifier: 37679380
GI number: 37679380
Start: 1213070
End: 1213450
Strand: Direct
Name: luxU [H]
Synonym: VV1196
Alternate gene names: 37679380
Gene position: 1213070-1213450 (Clockwise)
Preceding gene: 37679379
Following gene: 37679382
Centisome position: 36.16
GC content: 46.72
Gene sequence:
>381_bases GTGGAACGAAAAAGAAGAAAAACAGAAAGCATAATGGAATTACTAAATCAGAAGAAAATTGCCTCGTTGACAGAGGAAAT AGGCGCCGACAATGTCCCCGTGTTGTTGGAGATATTTTTGAGCGAGCTTGAGAGCTATTTAAAGGTTCTGTGCGATGCCA CCTATAGTGACAAGCTCGTCTATCTCAAAGACATCAGTCATGCCTTAAAAAGCAGTGCTGCCAGTTTTGGTGCGGATGCA CTGTGTCATTTTGCCGTCGAGATCGACACGCGAGCAAAAGAAGGGGATGCCTTGGATGAAACGCAAGATGTGGTAGCAAT GATTGACCGCCTGCATCAAACCCAGCAGGCTTACCTCTCCTGGCAGGCAAACGGCTTCTGA
Upstream 100 bases:
>100_bases TGGCGATTGAACAAGCGATCAAAGCGTGTGATGGTAACATTCCGAGAGCCGCCGGCTATCTGGATGTCAGCCCGTCAACG ATTTATCGCAAGTTACAGGC
Downstream 100 bases:
>100_bases AATAACGGCTCGTAGATACGAGCCGTTTTACTATCAAAATACAAGGGACTTACTGAGTCCTACTTGCTGAGTTCTAAGTA ATGCTTCGTATGCTCAATCG
Product: phosphorelay protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MERKRRKTESIMELLNQKKIASLTEEIGADNVPVLLEIFLSELESYLKVLCDATYSDKLVYLKDISHALKSSAASFGADA LCHFAVEIDTRAKEGDALDETQDVVAMIDRLHQTQQAYLSWQANGF
Sequences:
>Translated_126_residues MERKRRKTESIMELLNQKKIASLTEEIGADNVPVLLEIFLSELESYLKVLCDATYSDKLVYLKDISHALKSSAASFGADA LCHFAVEIDTRAKEGDALDETQDVVAMIDRLHQTQQAYLSWQANGF >Mature_126_residues MERKRRKTESIMELLNQKKIASLTEEIGADNVPVLLEIFLSELESYLKVLCDATYSDKLVYLKDISHALKSSAASFGADA LCHFAVEIDTRAKEGDALDETQDVVAMIDRLHQTQQAYLSWQANGF
Specific function: Phosphorelay protein which receives a sensory signal from a sensor kinase and transmit it to luxO. At low cell density, a phosphoryl group is transferred from the sensor kinase, probably on His-56 and this phosphoryl group is further transferred to luxO [
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008207 [H]
Pfam domain/function: PF01627 Hpt [H]
EC number: NA
Molecular weight: Translated: 14168; Mature: 14168
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKRRKTESIMELLNQKKIASLTEEIGADNVPVLLEIFLSELESYLKVLCDATYSDKLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH YLKDISHALKSSAASFGADALCHFAVEIDTRAKEGDALDETQDVVAMIDRLHQTQQAYLS HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH WQANGF CCCCCC >Mature Secondary Structure MERKRRKTESIMELLNQKKIASLTEEIGADNVPVLLEIFLSELESYLKVLCDATYSDKLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH YLKDISHALKSSAASFGADALCHFAVEIDTRAKEGDALDETQDVVAMIDRLHQTQQAYLS HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH WQANGF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA