Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679328

Identifier: 37679328

GI number: 37679328

Start: 1153752

End: 1155476

Strand: Direct

Name: 37679328

Synonym: VV1144

Alternate gene names: NA

Gene position: 1153752-1155476 (Clockwise)

Preceding gene: 37679327

Following gene: 37679332

Centisome position: 34.39

GC content: 48.64

Gene sequence:

>1725_bases
GTGACATTGCGCTTGAGTCGGACTAGGAGAATCAACATGAAGAAAACAACGATATTTTGGATCTGCGCTGCCCCTCTTAG
TTTGATCGGCCATTTGGCTTGGTCTGCCGCCACTAATGACAGTCAAGTTGTCAATGGGGATGGCTCCGTCACTGTTACGC
AAACCGTCGACGAAAACAGTAGTGCACCTCACTACAGCTCTCCGGGGGCATACGGCTTTGGCATCTACAGTAATGCGAAT
CAAGATTATGGCTGGCAGCACAGCATCACATTGCCCGATGGGGCGCAAGTGCTCGAAGCGAAACTCACTATTTATGCCTA
TGATGTGGACTCGGAAGCGTTTCACGGAGAAAACGGTGAATACGACGGCGTTTCTGTCGATGGTGTTCAACTGAATCCTG
GATTTTTGCAAGGAACCAACAACACTTGGTCAATCACAGAGTTTTCATTACCGATTTCCTCTTTGGCGGATGGTTTGGTC
AATGTTTATTTGGATATCGATATGAACAATGGTGGCTGGCTAACAACCTTGGACTACAGCCTAATGACGGTGACCTATTT
GGTGACGAGCAATACACCACCGTCTGTGCCTGAACTGAGTCGTAGCCAAGGGCTTTCCACCAATGATGATCTCGTGGTGT
CAGTTGTTGGCCCTAATCCCGCCGATCCAGACGGTGACTCAGTCAGTTACAACTACCGTTGGTTTGTTGATGTTGGGCAG
GGATTCTTTGTTGATGATGAATTTGCGGGTAAAAACAATCATACCGGTCCGTCTGTACCCGCTGCACAAACTAACAATGG
TGAGCGCTGGAAAGTACAAGTACAAGCCGAAGATACCAATGGTTTAATCAGTGATATCACCGAAATAGAATGGCCTGCGA
TTGGCGACTCAGATGGTGATGGTGTGGCGGATGCCAACGATTATGCGCCTAACGACCCAACCATTGCCTTTTACGCGCGT
ACCCCTACGTCGGGTTGGTATACTCTCACTTATGAAGACATGTGGCCATTTGCCGGCGATTATGATCTCAACGATTTTGT
CTCACATTACGCGTATGAGGTGTACACCAACGCGAACAATCAAATTACGCGTCTAGATTTTATTGGTCAGGCGGTAGCAA
GAGGGGCGGCTGTGGATAATCGCTTTGCCTTGTCGATCGCGGGCATAGAATCTGCAGATGTAAGCAGTTTGACTCGTGTC
GTCGATGGCGTCAGTGCCAGCATGGTGGCTGAAAATGGACACAGTGGTGAGTTGGTGTTTGTGGTTTTGGAAAGCATCAG
TACTTTGTTACCTGGCGATGCCAACAGTGAGTTTTACAATACAGAGATGGGTGATGACAGACCTGTCGTCGATTACAGTG
TCTCTCTAATACTCAATAGCTCAATGCCACCTCTTGCCAGCCATACGCTTAACCCCTTTATTTTCCGAGCGGCACAAAGA
GGCCGGGAAGTACACTTGATGAATTACCCAAGCAGTGATCTGGCGAATCAAGCCTCATTTGGGCAGGGGGTGGATGCGAC
GAATACTCAAGCGGGAGAATACTATCTTACTGCAGACGGATTGCCTTGGGCACTTTCGATTCCAACCGCCTGGAAACACC
CTTATGAAAACATCGATAGCACCTTGGCTTATCCGCAGGTGGTGGATTGGGCTGAGTCGGGAGGCGTGAGTTCTACAACG
TGGTTTAACACTTGGGTAAAAGGGAAGTGCTGGAAGTGTAATTAA

Upstream 100 bases:

>100_bases
GGGCACTGGCAGGCAATCCAAGCGGTATCGACAGTGAGAGAAATTGAGTGCGTATCAAGCACGGAAATTTCCGCAATGGA
CGATGTGATCGCCTTGGGTT

Downstream 100 bases:

>100_bases
CACTCAAAGTCAAAGACAACAAAGGGCGAAAACTCGCCCTTTGTTTTTGCTCGCTCTTCGAATTAATGAAAAAAGTCGAC
TTGCGATTTAAGTGAATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 574; Mature: 573

Protein sequence:

>574_residues
MTLRLSRTRRINMKKTTIFWICAAPLSLIGHLAWSAATNDSQVVNGDGSVTVTQTVDENSSAPHYSSPGAYGFGIYSNAN
QDYGWQHSITLPDGAQVLEAKLTIYAYDVDSEAFHGENGEYDGVSVDGVQLNPGFLQGTNNTWSITEFSLPISSLADGLV
NVYLDIDMNNGGWLTTLDYSLMTVTYLVTSNTPPSVPELSRSQGLSTNDDLVVSVVGPNPADPDGDSVSYNYRWFVDVGQ
GFFVDDEFAGKNNHTGPSVPAAQTNNGERWKVQVQAEDTNGLISDITEIEWPAIGDSDGDGVADANDYAPNDPTIAFYAR
TPTSGWYTLTYEDMWPFAGDYDLNDFVSHYAYEVYTNANNQITRLDFIGQAVARGAAVDNRFALSIAGIESADVSSLTRV
VDGVSASMVAENGHSGELVFVVLESISTLLPGDANSEFYNTEMGDDRPVVDYSVSLILNSSMPPLASHTLNPFIFRAAQR
GREVHLMNYPSSDLANQASFGQGVDATNTQAGEYYLTADGLPWALSIPTAWKHPYENIDSTLAYPQVVDWAESGGVSSTT
WFNTWVKGKCWKCN

Sequences:

>Translated_574_residues
MTLRLSRTRRINMKKTTIFWICAAPLSLIGHLAWSAATNDSQVVNGDGSVTVTQTVDENSSAPHYSSPGAYGFGIYSNAN
QDYGWQHSITLPDGAQVLEAKLTIYAYDVDSEAFHGENGEYDGVSVDGVQLNPGFLQGTNNTWSITEFSLPISSLADGLV
NVYLDIDMNNGGWLTTLDYSLMTVTYLVTSNTPPSVPELSRSQGLSTNDDLVVSVVGPNPADPDGDSVSYNYRWFVDVGQ
GFFVDDEFAGKNNHTGPSVPAAQTNNGERWKVQVQAEDTNGLISDITEIEWPAIGDSDGDGVADANDYAPNDPTIAFYAR
TPTSGWYTLTYEDMWPFAGDYDLNDFVSHYAYEVYTNANNQITRLDFIGQAVARGAAVDNRFALSIAGIESADVSSLTRV
VDGVSASMVAENGHSGELVFVVLESISTLLPGDANSEFYNTEMGDDRPVVDYSVSLILNSSMPPLASHTLNPFIFRAAQR
GREVHLMNYPSSDLANQASFGQGVDATNTQAGEYYLTADGLPWALSIPTAWKHPYENIDSTLAYPQVVDWAESGGVSSTT
WFNTWVKGKCWKCN
>Mature_573_residues
TLRLSRTRRINMKKTTIFWICAAPLSLIGHLAWSAATNDSQVVNGDGSVTVTQTVDENSSAPHYSSPGAYGFGIYSNANQ
DYGWQHSITLPDGAQVLEAKLTIYAYDVDSEAFHGENGEYDGVSVDGVQLNPGFLQGTNNTWSITEFSLPISSLADGLVN
VYLDIDMNNGGWLTTLDYSLMTVTYLVTSNTPPSVPELSRSQGLSTNDDLVVSVVGPNPADPDGDSVSYNYRWFVDVGQG
FFVDDEFAGKNNHTGPSVPAAQTNNGERWKVQVQAEDTNGLISDITEIEWPAIGDSDGDGVADANDYAPNDPTIAFYART
PTSGWYTLTYEDMWPFAGDYDLNDFVSHYAYEVYTNANNQITRLDFIGQAVARGAAVDNRFALSIAGIESADVSSLTRVV
DGVSASMVAENGHSGELVFVVLESISTLLPGDANSEFYNTEMGDDRPVVDYSVSLILNSSMPPLASHTLNPFIFRAAQRG
REVHLMNYPSSDLANQASFGQGVDATNTQAGEYYLTADGLPWALSIPTAWKHPYENIDSTLAYPQVVDWAESGGVSSTTW
FNTWVKGKCWKCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62397; Mature: 62266

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRLSRTRRINMKKTTIFWICAAPLSLIGHLAWSAATNDSQVVNGDGSVTVTQTVDENS
CEEEECCCEECCEEEEEEEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCC
SAPHYSSPGAYGFGIYSNANQDYGWQHSITLPDGAQVLEAKLTIYAYDVDSEAFHGENGE
CCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHEEEEEEEEEEEECCCHHCCCCCCC
YDGVSVDGVQLNPGFLQGTNNTWSITEFSLPISSLADGLVNVYLDIDMNNGGWLTTLDYS
CCCEEECCEEECCCEEECCCCEEEEEEECCCHHHHCCCEEEEEEEEEECCCCEEEEECCE
LMTVTYLVTSNTPPSVPELSRSQGLSTNDDLVVSVVGPNPADPDGDSVSYNYRWFVDVGQ
EEEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCC
GFFVDDEFAGKNNHTGPSVPAAQTNNGERWKVQVQAEDTNGLISDITEIEWPAIGDSDGD
CEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCC
GVADANDYAPNDPTIAFYARTPTSGWYTLTYEDMWPFAGDYDLNDFVSHYAYEVYTNANN
CCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHEEEEEEECCCC
QITRLDFIGQAVARGAAVDNRFALSIAGIESADVSSLTRVVDGVSASMVAENGHSGELVF
CEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEE
VVLESISTLLPGDANSEFYNTEMGDDRPVVDYSVSLILNSSMPPLASHTLNPFIFRAAQR
EEEHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCCHHHHCCCHHHHHHHHC
GREVHLMNYPSSDLANQASFGQGVDATNTQAGEYYLTADGLPWALSIPTAWKHPYENIDS
CCEEEEEECCCHHHHCHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHCCCHHHHHH
TLAYPQVVDWAESGGVSSTTWFNTWVKGKCWKCN
HCCCCHHHHHHHCCCCCCCEEEEHEECCEEEECC
>Mature Secondary Structure 
TLRLSRTRRINMKKTTIFWICAAPLSLIGHLAWSAATNDSQVVNGDGSVTVTQTVDENS
EEEECCCEECCEEEEEEEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCC
SAPHYSSPGAYGFGIYSNANQDYGWQHSITLPDGAQVLEAKLTIYAYDVDSEAFHGENGE
CCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHEEEEEEEEEEEECCCHHCCCCCCC
YDGVSVDGVQLNPGFLQGTNNTWSITEFSLPISSLADGLVNVYLDIDMNNGGWLTTLDYS
CCCEEECCEEECCCEEECCCCEEEEEEECCCHHHHCCCEEEEEEEEEECCCCEEEEECCE
LMTVTYLVTSNTPPSVPELSRSQGLSTNDDLVVSVVGPNPADPDGDSVSYNYRWFVDVGQ
EEEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCC
GFFVDDEFAGKNNHTGPSVPAAQTNNGERWKVQVQAEDTNGLISDITEIEWPAIGDSDGD
CEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCC
GVADANDYAPNDPTIAFYARTPTSGWYTLTYEDMWPFAGDYDLNDFVSHYAYEVYTNANN
CCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHEEEEEEECCCC
QITRLDFIGQAVARGAAVDNRFALSIAGIESADVSSLTRVVDGVSASMVAENGHSGELVF
CEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEE
VVLESISTLLPGDANSEFYNTEMGDDRPVVDYSVSLILNSSMPPLASHTLNPFIFRAAQR
EEEHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCCHHHHCCCHHHHHHHHC
GREVHLMNYPSSDLANQASFGQGVDATNTQAGEYYLTADGLPWALSIPTAWKHPYENIDS
CCEEEEEECCCHHHHCHHHCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHCCCHHHHHH
TLAYPQVVDWAESGGVSSTTWFNTWVKGKCWKCN
HCCCCHHHHHHHCCCCCCCEEEEHEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA