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The map label for this gene is ychA [C]

Identifier: 37679118

GI number: 37679118

Start: 933769

End: 934578

Strand: Direct

Name: ychA [C]

Synonym: VV0934

Alternate gene names: 37679118

Gene position: 933769-934578 (Clockwise)

Preceding gene: 37679117

Following gene: 161486643

Centisome position: 27.84

GC content: 45.68

Gene sequence:

>810_bases
ATGCTGGAATTGTTTGACGAAGATTTTGACAACATGGAGCTGGTGGAAGGGGCGTTAGAGCTCAATAAAGCCATTAATCC
AGAAACAGAAGATCTTTGGGTAAAGCATGAGTTGGCTCGTTTGTTAAAAGAAGCGGAAAACGAACTGTTTGTCGAGCGAG
ATGAAAAGCAACGCTTTGACGCCTTTCTACGCCTATTTTTCATCCAATGGCAGTTCCAAGGTGATCGTGAAGCCTATTTT
GATTCAGACAACAGCTTTATTGATAAAGTATTGCAGCGTCGGAAAGGCATCCCTGTCAGTTTAGGAGCGATACTGCTTTA
TCTGGGTCGCCAGCTTGGCTTCGACTTGCATGGTGTCACCTTTCCAACCCAGTTTCTTTTGCGAGTGGATTGGTGTGAAG
GGGGCGTTCAATACATCAACCCATTTAATGGTGAGTTTGTTGGCGAGCGCCTTTTACAAGCTTGGTTGATTGGCCACGAA
GGGCCGTTAGCAACGTTGAAACCTGAGCATCTTGAGGTGGCGGATAACCCTACGGTGATTGGCCGCTGGCTTGCCTTATT
AAAAGGCGCACTACTTCGAGAAGAGCGCTATACTCTGGCTTTACGTTGTACCAATCTGGCGTTAACGTTTGTGCCAGATG
ACCCTTATGAAATTCGTGATCGCGGCTTTATCTATCAACAACTAGAGTGTCATCAAATTGCGGTGTCTGATTTTCAATAT
TTTATTGATCAGTGTCCCGATGACCCAGCGGCAGAGCTGCTAAAAAAACAAGTTAACGTGATGAGTGGCAAAGCGGTCAC
TCTACATTGA

Upstream 100 bases:

>100_bases
TCGGTTGGCTAGCGATGGCAGGCAAATTGGCGGTTTCAAAGACACCGATGTTTTTCGGTTAAGAATATTTAGTGTGAATT
AAGGAAACGGATAACAAGTA

Downstream 100 bases:

>100_bases
TCAAATAAGAGACATAATGATGGAACAGAAAATTGTTCAGATTGGTGATATTCCAGTTGCCAACGATAAGCCATTTACTT
TGTTTGCTGGCATGAACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MLELFDEDFDNMELVEGALELNKAINPETEDLWVKHELARLLKEAENELFVERDEKQRFDAFLRLFFIQWQFQGDREAYF
DSDNSFIDKVLQRRKGIPVSLGAILLYLGRQLGFDLHGVTFPTQFLLRVDWCEGGVQYINPFNGEFVGERLLQAWLIGHE
GPLATLKPEHLEVADNPTVIGRWLALLKGALLREERYTLALRCTNLALTFVPDDPYEIRDRGFIYQQLECHQIAVSDFQY
FIDQCPDDPAAELLKKQVNVMSGKAVTLH

Sequences:

>Translated_269_residues
MLELFDEDFDNMELVEGALELNKAINPETEDLWVKHELARLLKEAENELFVERDEKQRFDAFLRLFFIQWQFQGDREAYF
DSDNSFIDKVLQRRKGIPVSLGAILLYLGRQLGFDLHGVTFPTQFLLRVDWCEGGVQYINPFNGEFVGERLLQAWLIGHE
GPLATLKPEHLEVADNPTVIGRWLALLKGALLREERYTLALRCTNLALTFVPDDPYEIRDRGFIYQQLECHQIAVSDFQY
FIDQCPDDPAAELLKKQVNVMSGKAVTLH
>Mature_269_residues
MLELFDEDFDNMELVEGALELNKAINPETEDLWVKHELARLLKEAENELFVERDEKQRFDAFLRLFFIQWQFQGDREAYF
DSDNSFIDKVLQRRKGIPVSLGAILLYLGRQLGFDLHGVTFPTQFLLRVDWCEGGVQYINPFNGEFVGERLLQAWLIGHE
GPLATLKPEHLEVADNPTVIGRWLALLKGALLREERYTLALRCTNLALTFVPDDPYEIRDRGFIYQQLECHQIAVSDFQY
FIDQCPDDPAAELLKKQVNVMSGKAVTLH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family [H]

Homologues:

Organism=Homo sapiens, GI16306500, Length=94, Percent_Identity=38.2978723404255, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI16306502, Length=94, Percent_Identity=38.2978723404255, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1787465, Length=269, Percent_Identity=40.5204460966543, Blast_Score=205, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31152; Mature: 31152

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELFDEDFDNMELVEGALELNKAINPETEDLWVKHELARLLKEAENELFVERDEKQRFD
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
AFLRLFFIQWQFQGDREAYFDSDNSFIDKVLQRRKGIPVSLGAILLYLGRQLGFDLHGVT
HHHHHHHHHEEECCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
FPTQFLLRVDWCEGGVQYINPFNGEFVGERLLQAWLIGHEGPLATLKPEHLEVADNPTVI
CCHHHHEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHH
GRWLALLKGALLREERYTLALRCTNLALTFVPDDPYEIRDRGFIYQQLECHQIAVSDFQY
HHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHH
FIDQCPDDPAAELLKKQVNVMSGKAVTLH
HHHHCCCCHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MLELFDEDFDNMELVEGALELNKAINPETEDLWVKHELARLLKEAENELFVERDEKQRFD
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
AFLRLFFIQWQFQGDREAYFDSDNSFIDKVLQRRKGIPVSLGAILLYLGRQLGFDLHGVT
HHHHHHHHHEEECCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
FPTQFLLRVDWCEGGVQYINPFNGEFVGERLLQAWLIGHEGPLATLKPEHLEVADNPTVI
CCHHHHEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHH
GRWLALLKGALLREERYTLALRCTNLALTFVPDDPYEIRDRGFIYQQLECHQIAVSDFQY
HHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHH
FIDQCPDDPAAELLKKQVNVMSGKAVTLH
HHHHCCCCHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]