| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is pgpA [H]
Identifier: 37679051
GI number: 37679051
Start: 871338
End: 871841
Strand: Direct
Name: pgpA [H]
Synonym: VV0867
Alternate gene names: 37679051
Gene position: 871338-871841 (Clockwise)
Preceding gene: 37679050
Following gene: 37679055
Centisome position: 25.98
GC content: 47.22
Gene sequence:
>504_bases ATGAACAATCCACTTGATAAAATTTCTTTAAATAATCCTTGGCATTTATTGGCAACGGGGTTTGGCAGTGGCTTATCGCC GATTATCCCTGGCACCATGGGGACGTTGGCATCCATTCCTCTGTTTTTGGTTTTCGCTCCATTGCCTCTTCCTGTCTATT TGGTGATTGTTCTCGCTGCCTGTCTAGTCGGTATTAAAATTTGCCAGGTGACGTCAGATGACATGGGTGTGCACGATCAC GGCTCGATTGTCTGGGATGAGTTTGCTGGCTTTTGGATCACCATGACCATCATGCCTGCGTTGCAAATTCCCATTTCTGA GTTGAAATGGGTAGGCGCAGGGTTCGTATTGTTCCGCTTCTTCGATATGGTCAAACCTTGGCCGATTGGCTGGTTGGATA AGCGTGTGCATGGTGGGTTAGGCATAATGCTGGATGACATTGTCGCAGGGGTGATGTCTGCCATTTCTCTCTATGTGCTA GGGTATTTTGCTGGTTGGCTATAA
Upstream 100 bases:
>100_bases TCGGGCAAATTCGTCCACATGGTTTTTTTGAACTCCATGATGATGGCACAAAATTAAACTGGGATTTGAGTGGCTTTGAC CACTTTAAGGCGTAATCACC
Downstream 100 bases:
>100_bases GCCAGATAAGGCATAAACAAAAGGGATTGGCTTTGCCAATCCCTTTTTTGTGTCTGTTCGTCTTTACTTTATTTTGCAAG ATAGTGGCGAATCGCTTGTT
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MNNPLDKISLNNPWHLLATGFGSGLSPIIPGTMGTLASIPLFLVFAPLPLPVYLVIVLAACLVGIKICQVTSDDMGVHDH GSIVWDEFAGFWITMTIMPALQIPISELKWVGAGFVLFRFFDMVKPWPIGWLDKRVHGGLGIMLDDIVAGVMSAISLYVL GYFAGWL
Sequences:
>Translated_167_residues MNNPLDKISLNNPWHLLATGFGSGLSPIIPGTMGTLASIPLFLVFAPLPLPVYLVIVLAACLVGIKICQVTSDDMGVHDH GSIVWDEFAGFWITMTIMPALQIPISELKWVGAGFVLFRFFDMVKPWPIGWLDKRVHGGLGIMLDDIVAGVMSAISLYVL GYFAGWL >Mature_167_residues MNNPLDKISLNNPWHLLATGFGSGLSPIIPGTMGTLASIPLFLVFAPLPLPVYLVIVLAACLVGIKICQVTSDDMGVHDH GSIVWDEFAGFWITMTIMPALQIPISELKWVGAGFVLFRFFDMVKPWPIGWLDKRVHGGLGIMLDDIVAGVMSAISLYVL GYFAGWL
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=157, Percent_Identity=56.0509554140127, Blast_Score=187, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 18199; Mature: 18199
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPLDKISLNNPWHLLATGFGSGLSPIIPGTMGTLASIPLFLVFAPLPLPVYLVIVLAA CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH CLVGIKICQVTSDDMGVHDHGSIVWDEFAGFWITMTIMPALQIPISELKWVGAGFVLFRF HHHHHHHEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FDMVKPWPIGWLDKRVHGGLGIMLDDIVAGVMSAISLYVLGYFAGWL HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNPLDKISLNNPWHLLATGFGSGLSPIIPGTMGTLASIPLFLVFAPLPLPVYLVIVLAA CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH CLVGIKICQVTSDDMGVHDHGSIVWDEFAGFWITMTIMPALQIPISELKWVGAGFVLFRF HHHHHHHEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FDMVKPWPIGWLDKRVHGGLGIMLDDIVAGVMSAISLYVLGYFAGWL HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]