| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is proA
Identifier: 37679043
GI number: 37679043
Start: 864293
End: 865543
Strand: Direct
Name: proA
Synonym: VV0859
Alternate gene names: 37679043
Gene position: 864293-865543 (Clockwise)
Preceding gene: 161486649
Following gene: 161486648
Centisome position: 25.77
GC content: 49.48
Gene sequence:
>1251_bases GTGGATTTAATCACATTAGGTAAAGCGGCAAAAGATGCGGCTTTTCAGCTTGCCACCGCTTCTACGGCGCAAAAGAACAA AGCATTGGCCATCATTGCAGATGAACTTGAAGCGAATGCGGCGGATATTTTGGCGGCAAACAGTAAAGATATCGAACTCG GTCGACAAGCGGGTTTGAGCGAAGCGATGCTGGATCGTTTACTTTTGAATGAATCTCGCTTGAATGGCATCGCCAACGAT GTACGTAACGTGATCAGCCTGACGGATCCGGTCGGTAGCGAAATCGACAGTAAAGTGTTAGAAAATGGCATGCAGTTGTC ACGCCGTCGTGTGCCGCTTGGCGTGGTTGGTGTGATTTACGAAGCACGCCCAAATGTCACCATCGACATCGCGGCATTGT GTCTAAAAACTGGCAATGCGAGCATCCTACGTGGCGGAAAAGAGACCTTCTTCTCCAACATGGAGTTGGTGAAGGTGATT CAATCGGCGTTAGCGAAAGCTGGCTTGCCAGCGGCCTCCGTGCAGTACATTGAAAAACCGGATCGTGAGCTGGTCACTCA ATTGCTGAAACTGGACGATTACGTTGACATGATCATCCCTCGTGGTGGCGCGGGGCTGCACAAAATGTGTAAAGAGAACA GCACCATCCCAGTGATCATTGGTGGTTTCGGTATCAGCCATATTTTTGTTGATGAAACGGCTGATCTCGCGAAAAGCGTG GATGTGGTGGAGAATGCAAAAGCTCAGCGTCCTTCCGCTTGTAATGCGCTGGATACCTTACTTGTTCATGAGCGTATCGC AGAGCAGTTTCTTCCGATGCTGGTGGCAAAACTCAATGGCAAAGTAACTTTTGTTGTTGAGCCAAAAGCCAAAGCGTACA TGACTAAAGCTGAACAGGTGCGTGATGCGAGTGAGGGTGATTTTGATACCGAATGGTTGAGTTACACGCTGGGAGTTAAA GTGGTTGCGGATGTGCAAGAAGCGATCGACCACATGCGTGAACATAACGCGAGTCACTCTGATGCCATCATGACTAACCA TCTGCAAAATGCTGAGTTGTTCATCAACTCGGCGGGCTCTGCGGCGGTGTATGTCAACGCATCGACTCGCTTTACCGATG GCGCACAATTTGGTTTGGGCGCAGAAGTGGCAGTATCTACTCAGAAATTGCACGCACGCGGTCCAATGGGATTGGAAGAG TTAACCAGTTACAAATGGGTTGGCAAGGCGAATTACCTTTCACGCGCGTAA
Upstream 100 bases:
>100_bases TTCGATTCTGGGCTATGACTATGGTTCAGAAGTGATTCACCGTGACGACATGGTTGTCATTCAAGAATAGTCGCTCACCA GAATCAAAGAGGACAACAAA
Downstream 100 bases:
>100_bases GCGTAATCGAGTTTGAGTTAACATATCCGGTCTAAACCGTTTTGAAAAAGGGGCATCACGCCCCTTTTTGTTTTATTCGG CCTAGCAATTCCGCTAAACT
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MDLITLGKAAKDAAFQLATASTAQKNKALAIIADELEANAADILAANSKDIELGRQAGLSEAMLDRLLLNESRLNGIAND VRNVISLTDPVGSEIDSKVLENGMQLSRRRVPLGVVGVIYEARPNVTIDIAALCLKTGNASILRGGKETFFSNMELVKVI QSALAKAGLPAASVQYIEKPDRELVTQLLKLDDYVDMIIPRGGAGLHKMCKENSTIPVIIGGFGISHIFVDETADLAKSV DVVENAKAQRPSACNALDTLLVHERIAEQFLPMLVAKLNGKVTFVVEPKAKAYMTKAEQVRDASEGDFDTEWLSYTLGVK VVADVQEAIDHMREHNASHSDAIMTNHLQNAELFINSAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEE LTSYKWVGKANYLSRA
Sequences:
>Translated_416_residues MDLITLGKAAKDAAFQLATASTAQKNKALAIIADELEANAADILAANSKDIELGRQAGLSEAMLDRLLLNESRLNGIAND VRNVISLTDPVGSEIDSKVLENGMQLSRRRVPLGVVGVIYEARPNVTIDIAALCLKTGNASILRGGKETFFSNMELVKVI QSALAKAGLPAASVQYIEKPDRELVTQLLKLDDYVDMIIPRGGAGLHKMCKENSTIPVIIGGFGISHIFVDETADLAKSV DVVENAKAQRPSACNALDTLLVHERIAEQFLPMLVAKLNGKVTFVVEPKAKAYMTKAEQVRDASEGDFDTEWLSYTLGVK VVADVQEAIDHMREHNASHSDAIMTNHLQNAELFINSAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEE LTSYKWVGKANYLSRA >Mature_416_residues MDLITLGKAAKDAAFQLATASTAQKNKALAIIADELEANAADILAANSKDIELGRQAGLSEAMLDRLLLNESRLNGIAND VRNVISLTDPVGSEIDSKVLENGMQLSRRRVPLGVVGVIYEARPNVTIDIAALCLKTGNASILRGGKETFFSNMELVKVI QSALAKAGLPAASVQYIEKPDRELVTQLLKLDDYVDMIIPRGGAGLHKMCKENSTIPVIIGGFGISHIFVDETADLAKSV DVVENAKAQRPSACNALDTLLVHERIAEQFLPMLVAKLNGKVTFVVEPKAKAYMTKAEQVRDASEGDFDTEWLSYTLGVK VVADVQEAIDHMREHNASHSDAIMTNHLQNAELFINSAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEE LTSYKWVGKANYLSRA
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate [H]
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family [H]
Homologues:
Organism=Homo sapiens, GI62912457, Length=418, Percent_Identity=37.799043062201, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI21361368, Length=418, Percent_Identity=37.799043062201, Blast_Score=248, Evalue=5e-66, Organism=Escherichia coli, GI1786438, Length=421, Percent_Identity=57.4821852731591, Blast_Score=492, Evalue=1e-140, Organism=Caenorhabditis elegans, GI17569969, Length=402, Percent_Identity=33.0845771144279, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17569967, Length=402, Percent_Identity=33.0845771144279, Blast_Score=220, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6324899, Length=419, Percent_Identity=38.4248210023866, Blast_Score=276, Evalue=3e-75, Organism=Drosophila melanogaster, GI21357643, Length=406, Percent_Identity=33.2512315270936, Blast_Score=233, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.41 [H]
Molecular weight: Translated: 44774; Mature: 44774
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLITLGKAAKDAAFQLATASTAQKNKALAIIADELEANAADILAANSKDIELGRQAGLS CCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEECCCCCHHHHHHCCHH EAMLDRLLLNESRLNGIANDVRNVISLTDPVGSEIDSKVLENGMQLSRRRVPLGVVGVIY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE EARPNVTIDIAALCLKTGNASILRGGKETFFSNMELVKVIQSALAKAGLPAASVQYIEKP ECCCCCEEEEEHHHHHCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCC DRELVTQLLKLDDYVDMIIPRGGAGLHKMCKENSTIPVIIGGFGISHIFVDETADLAKSV CHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCEEEEECCCEEEEEECCHHHHHHHH DVVENAKAQRPSACNALDTLLVHERIAEQFLPMLVAKLNGKVTFVVEPKAKAYMTKAEQV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH RDASEGDFDTEWLSYTLGVKVVADVQEAIDHMREHNASHSDAIMTNHLQNAELFINSAGS HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCC AAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTSYKWVGKANYLSRA EEEEEECCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHCCCCCCCCHHHCCC >Mature Secondary Structure MDLITLGKAAKDAAFQLATASTAQKNKALAIIADELEANAADILAANSKDIELGRQAGLS CCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEECCCCCHHHHHHCCHH EAMLDRLLLNESRLNGIANDVRNVISLTDPVGSEIDSKVLENGMQLSRRRVPLGVVGVIY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE EARPNVTIDIAALCLKTGNASILRGGKETFFSNMELVKVIQSALAKAGLPAASVQYIEKP ECCCCCEEEEEHHHHHCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCC DRELVTQLLKLDDYVDMIIPRGGAGLHKMCKENSTIPVIIGGFGISHIFVDETADLAKSV CHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCEEEEECCCEEEEEECCHHHHHHHH DVVENAKAQRPSACNALDTLLVHERIAEQFLPMLVAKLNGKVTFVVEPKAKAYMTKAEQV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH RDASEGDFDTEWLSYTLGVKVVADVQEAIDHMREHNASHSDAIMTNHLQNAELFINSAGS HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCC AAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTSYKWVGKANYLSRA EEEEEECCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA