| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is gltT [H]
Identifier: 37679010
GI number: 37679010
Start: 829340
End: 830620
Strand: Direct
Name: gltT [H]
Synonym: VV0826
Alternate gene names: 37679010
Gene position: 829340-830620 (Clockwise)
Preceding gene: 37679009
Following gene: 37679011
Centisome position: 24.72
GC content: 48.17
Gene sequence:
>1281_bases ATGGATAAATCACTTTCAAGTAAGATTTTTGTAGGCTTGTTTGCTGGTCTACTTATCGGTACTGCTATTCAGTATCTCTT TAGTGGCGTTGCTATCTTTGATACTTATTTGCTGGGTGCCGCAGAGGGCGCTGGTGGTATGTTTGTATCGCTAATCAAGC TGCTGGTTGTGCCACTTGTTTATGTTTCGATTGTGTGTGGCATTGTTGACCTAAAAGACATTACTGCGTTTGGTCGCCTT GGTGGTAAAACTTTTGCGCTTTACATTATCAATACCATTATTGCGATTGCGGCAGCGCTGACGGTTGGTCTTATCTTCCA ACCAGGGGCGGATGCACATCTTGCGGGTACCATTTCAGAAACGGTAAAACTGACCACAACGGAAACACCGGATATCTTTT CGTTGGTAGTGAACATTGTGCCAAGCAACCCAGTGCAAGCTTTCGCCAATGGTGACATGCTGCAAATCATCTTTATGGCG ATTTTGACCGGTTTGGCAATCCAAGCGCTGGATTCTCGTGGTGGTCCTGCTATCCGTACTTTCAAGATGGCCAATGAGAT CATGATGAAACTGGTTGGCCTTGTGATGAGCCTTGCGCCTTACGGTGTGTTTGCTCTGATGATTCAACTTGGAGCGACTT TGGATGCCAACACGCTGATGTCGGTTGCGGGCTATGTCGCGTTAGTTGTGGCCATGCTGGTATTTTGGATCTTCTTCTTC TACCCAATAGTAGTGGGCATTACTACTGGGATCACACCCAAGGCATTTTTGCGTGCGACTCGTGAGCAGATCTTGTTCTC GTTATCGACCGCGAGCTCGAATGCAACCATCCCTGTGACCATGAGAACCCTGACTGAGAAGCTTAATGTATCTAAGTCTG TGGCTGGTTTTGGTGTGCCACTGGGCGCGACCATGAACATGTCAGGCGTGTCTATTTACATTGCGTTGGCGACCATGTTT GTGGCAAACGCATTTGGCCAGCCAATTAACACGGCAGACATCTTTACACTGGGCTTGACGATTCTTTTGCTTTCAATTGG TGCCGGTGGCGTACCTGGCGGTGGCGTAGTGATGGTGGGTGTACTGCTTCATCAACTTGGTTTGCCACCTGAAGGCCTTG CTATTATTGCCGCGGTAGACCGTATCAATGATATGTTCTGTACTTCGTCTAACGTAGTAGGCGATACCGCGGTGAATACC ATCGTTGCGAAATCTGAAGGGGAAATTGGTGTGGAAGCGGACGAAGCGCAAACAGCGCCTTCAACCACAGCGAATGCGTA A
Upstream 100 bases:
>100_bases TTTGTAATTCAAGTGTGTATTATGTGCGAACTCCGTCTTAAATATAGGCGGTTTTAACTACAAAACCATAAATTACAAAC ACAACATTCTGGAGTGAAGG
Downstream 100 bases:
>100_bases GCACACTTTTTCTGCGAAACAAAAGCGAAGCCTAGCGGCTTCGCTTTTTTTGTACTTTGAAATGATGCCCCCTCTTTTGC TCATTGAGTACATCAAGCGT
Product: sodium/glutamate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MDKSLSSKIFVGLFAGLLIGTAIQYLFSGVAIFDTYLLGAAEGAGGMFVSLIKLLVVPLVYVSIVCGIVDLKDITAFGRL GGKTFALYIINTIIAIAAALTVGLIFQPGADAHLAGTISETVKLTTTETPDIFSLVVNIVPSNPVQAFANGDMLQIIFMA ILTGLAIQALDSRGGPAIRTFKMANEIMMKLVGLVMSLAPYGVFALMIQLGATLDANTLMSVAGYVALVVAMLVFWIFFF YPIVVGITTGITPKAFLRATREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGVPLGATMNMSGVSIYIALATMF VANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVGVLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNT IVAKSEGEIGVEADEAQTAPSTTANA
Sequences:
>Translated_426_residues MDKSLSSKIFVGLFAGLLIGTAIQYLFSGVAIFDTYLLGAAEGAGGMFVSLIKLLVVPLVYVSIVCGIVDLKDITAFGRL GGKTFALYIINTIIAIAAALTVGLIFQPGADAHLAGTISETVKLTTTETPDIFSLVVNIVPSNPVQAFANGDMLQIIFMA ILTGLAIQALDSRGGPAIRTFKMANEIMMKLVGLVMSLAPYGVFALMIQLGATLDANTLMSVAGYVALVVAMLVFWIFFF YPIVVGITTGITPKAFLRATREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGVPLGATMNMSGVSIYIALATMF VANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVGVLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNT IVAKSEGEIGVEADEAQTAPSTTANA >Mature_426_residues MDKSLSSKIFVGLFAGLLIGTAIQYLFSGVAIFDTYLLGAAEGAGGMFVSLIKLLVVPLVYVSIVCGIVDLKDITAFGRL GGKTFALYIINTIIAIAAALTVGLIFQPGADAHLAGTISETVKLTTTETPDIFSLVVNIVPSNPVQAFANGDMLQIIFMA ILTGLAIQALDSRGGPAIRTFKMANEIMMKLVGLVMSLAPYGVFALMIQLGATLDANTLMSVAGYVALVVAMLVFWIFFF YPIVVGITTGITPKAFLRATREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGVPLGATMNMSGVSIYIALATMF VANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVGVLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNT IVAKSEGEIGVEADEAQTAPSTTANA
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=408, Percent_Identity=29.1666666666667, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI21314632, Length=400, Percent_Identity=30, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI194239697, Length=425, Percent_Identity=26.5882352941176, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI4827012, Length=284, Percent_Identity=30.9859154929577, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI169790839, Length=413, Percent_Identity=27.1186440677966, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI5032093, Length=383, Percent_Identity=30.8093994778068, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI66773030, Length=399, Percent_Identity=26.8170426065163, Blast_Score=118, Evalue=9e-27, Organism=Homo sapiens, GI223468566, Length=284, Percent_Identity=31.3380281690141, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI223468564, Length=256, Percent_Identity=31.640625, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI262359914, Length=372, Percent_Identity=25.8064516129032, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI301601644, Length=140, Percent_Identity=37.1428571428571, Blast_Score=93, Evalue=5e-19, Organism=Escherichia coli, GI1790514, Length=416, Percent_Identity=33.1730769230769, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1789947, Length=372, Percent_Identity=29.5698924731183, Blast_Score=161, Evalue=9e-41, Organism=Escherichia coli, GI1788024, Length=401, Percent_Identity=27.6807980049875, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1789473, Length=288, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71983106, Length=398, Percent_Identity=29.1457286432161, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI71983099, Length=398, Percent_Identity=29.1457286432161, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17537407, Length=384, Percent_Identity=30.2083333333333, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71996953, Length=409, Percent_Identity=26.161369193154, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI193206654, Length=401, Percent_Identity=26.1845386533666, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI193206505, Length=391, Percent_Identity=26.0869565217391, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17541374, Length=393, Percent_Identity=26.7175572519084, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24583025, Length=421, Percent_Identity=25.6532066508314, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI17137668, Length=421, Percent_Identity=25.6532066508314, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24583023, Length=421, Percent_Identity=25.6532066508314, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI281360481, Length=449, Percent_Identity=24.0534521158129, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281360483, Length=449, Percent_Identity=24.0534521158129, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI17137666, Length=449, Percent_Identity=24.0534521158129, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 44206; Mature: 44206
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSLSSKIFVGLFAGLLIGTAIQYLFSGVAIFDTYLLGAAEGAGGMFVSLIKLLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH YVSIVCGIVDLKDITAFGRLGGKTFALYIINTIIAIAAALTVGLIFQPGADAHLAGTISE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHCCHHH TVKLTTTETPDIFSLVVNIVPSNPVQAFANGDMLQIIFMAILTGLAIQALDSRGGPAIRT CEEEEECCCCHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH FKMANEIMMKLVGLVMSLAPYGVFALMIQLGATLDANTLMSVAGYVALVVAMLVFWIFFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YPIVVGITTGITPKAFLRATREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGVP HHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHHCCHHHHHCCCCC LGATMNMSGVSIYIALATMFVANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVG CCCEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNTIVAKSEGEIGVEADEAQTAP HHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCC STTANA CCCCCC >Mature Secondary Structure MDKSLSSKIFVGLFAGLLIGTAIQYLFSGVAIFDTYLLGAAEGAGGMFVSLIKLLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH YVSIVCGIVDLKDITAFGRLGGKTFALYIINTIIAIAAALTVGLIFQPGADAHLAGTISE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHCCHHH TVKLTTTETPDIFSLVVNIVPSNPVQAFANGDMLQIIFMAILTGLAIQALDSRGGPAIRT CEEEEECCCCHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH FKMANEIMMKLVGLVMSLAPYGVFALMIQLGATLDANTLMSVAGYVALVVAMLVFWIFFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YPIVVGITTGITPKAFLRATREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGVP HHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHHCCHHHHHCCCCC LGATMNMSGVSIYIALATMFVANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVG CCCEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNTIVAKSEGEIGVEADEAQTAP HHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCC STTANA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]