Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is yagK [H]

Identifier: 37678985

GI number: 37678985

Start: 806984

End: 807628

Strand: Direct

Name: yagK [H]

Synonym: VV0801

Alternate gene names: 37678985

Gene position: 806984-807628 (Clockwise)

Preceding gene: 37678984

Following gene: 161486651

Centisome position: 24.06

GC content: 39.38

Gene sequence:

>645_bases
ATGAGCTTCAGAACCAAAAAACTCAAAACGACGACAAGTGATACATTTAACGGATTACCAATCCTGACACATAAAGGCGA
TTTAGTTCTTAACTATCTCGATAGATTGTACGACACGATTGATAAAGCCGTTACACAATACCCTCGAACGACAGCGATTA
GAGTCGACTTACATTTATCGAACCTACAACCAGATGGCTCTAGTGTCATAAAGAACTTTATTGCTTCGTTGGACGCTCAG
ATTCAAGCAGATCTCAGCCGGAAAAAAAGACGAGGTCAGACGGTGCGTAGTTGTAAGGTACGATATGTTTGGTGCAAGGA
AAAAGGGACATTATTGAATCGTCACCATTATCATCTCGTTTTGTTGTTGAACAAAGACGTATACCACTCCCTTGGACGGT
ATGAACAAAAAGGTAACTTATCAGACATGATAAAAAAAGCTTGGTGTCGAACATTGGGTATTTATGCCGATGAAGGTGAT
ACCTTAGTTCACTTTCCTGACAACCCAACCTATTGGTTAGATTTTAATTCAGATAAATTTGACCAACAAATAAATGAACT
ATTTAAACGGGTCAGCTACTTAGCTAAAGTCGAGACCAAGTGTTCTGAGGATAGGTACCGAAGTTTTGGGTGTTCTCGAA
CTTAA

Upstream 100 bases:

>100_bases
ACCACAACACATCATCACACATTAGGTAGACGTTACACACCTTAAAAATTAACTACACCTAACCATCCTATACCAGACAC
ATTGACTAACAGGTATAGCG

Downstream 100 bases:

>100_bases
ATAAGAGGGGGGCGATCCCCTCTCTATTCGTTATGATTAGTTAGCAGGCACTATGGGCAGTTCTTCACACATACCCATAT
GAGCCACATCCACTAGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSFRTKKLKTTTSDTFNGLPILTHKGDLVLNYLDRLYDTIDKAVTQYPRTTAIRVDLHLSNLQPDGSSVIKNFIASLDAQ
IQADLSRKKRRGQTVRSCKVRYVWCKEKGTLLNRHHYHLVLLLNKDVYHSLGRYEQKGNLSDMIKKAWCRTLGIYADEGD
TLVHFPDNPTYWLDFNSDKFDQQINELFKRVSYLAKVETKCSEDRYRSFGCSRT

Sequences:

>Translated_214_residues
MSFRTKKLKTTTSDTFNGLPILTHKGDLVLNYLDRLYDTIDKAVTQYPRTTAIRVDLHLSNLQPDGSSVIKNFIASLDAQ
IQADLSRKKRRGQTVRSCKVRYVWCKEKGTLLNRHHYHLVLLLNKDVYHSLGRYEQKGNLSDMIKKAWCRTLGIYADEGD
TLVHFPDNPTYWLDFNSDKFDQQINELFKRVSYLAKVETKCSEDRYRSFGCSRT
>Mature_213_residues
SFRTKKLKTTTSDTFNGLPILTHKGDLVLNYLDRLYDTIDKAVTQYPRTTAIRVDLHLSNLQPDGSSVIKNFIASLDAQI
QADLSRKKRRGQTVRSCKVRYVWCKEKGTLLNRHHYHLVLLLNKDVYHSLGRYEQKGNLSDMIKKAWCRTLGIYADEGDT
LVHFPDNPTYWLDFNSDKFDQQINELFKRVSYLAKVETKCSEDRYRSFGCSRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfjJ [H]

Homologues:

Organism=Escherichia coli, GI1786473, Length=201, Percent_Identity=37.8109452736318, Blast_Score=126, Evalue=8e-31,
Organism=Escherichia coli, GI1788979, Length=201, Percent_Identity=36.318407960199, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021723 [H]

Pfam domain/function: PF11726 DUF3296 [H]

EC number: NA

Molecular weight: Translated: 24921; Mature: 24790

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRTKKLKTTTSDTFNGLPILTHKGDLVLNYLDRLYDTIDKAVTQYPRTTAIRVDLHLS
CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
NLQPDGSSVIKNFIASLDAQIQADLSRKKRRGQTVRSCKVRYVWCKEKGTLLNRHHYHLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCCEECCCCEEEE
LLLNKDVYHSLGRYEQKGNLSDMIKKAWCRTLGIYADEGDTLVHFPDNPTYWLDFNSDKF
EEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEECCCCEEEECCCCCEEEEECCCCHH
DQQINELFKRVSYLAKVETKCSEDRYRSFGCSRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SFRTKKLKTTTSDTFNGLPILTHKGDLVLNYLDRLYDTIDKAVTQYPRTTAIRVDLHLS
CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
NLQPDGSSVIKNFIASLDAQIQADLSRKKRRGQTVRSCKVRYVWCKEKGTLLNRHHYHLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCCEECCCCEEEE
LLLNKDVYHSLGRYEQKGNLSDMIKKAWCRTLGIYADEGDTLVHFPDNPTYWLDFNSDKF
EEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEECCCCEEEECCCCCEEEEECCCCHH
DQQINELFKRVSYLAKVETKCSEDRYRSFGCSRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]