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The map label for this gene is rodZ [H]

Identifier: 37678949

GI number: 37678949

Start: 769406

End: 770356

Strand: Direct

Name: rodZ [H]

Synonym: VV0765

Alternate gene names: 37678949

Gene position: 769406-770356 (Clockwise)

Preceding gene: 37678948

Following gene: 37678950

Centisome position: 22.94

GC content: 47.0

Gene sequence:

>951_bases
ATGACTACAGATAACGATTTTTCACAAGACAGTGCCACAGAATCTCTCGCCATTGAACAAGTCGGTACCTTACTCAAACG
CCAACGCGAATCAATGGGTTACACGCAAAAACAAGTCGCAGATCGATTACGTTTACGCGTTAACGTGATTGAACAGATCG
ACGACAACCAGCTTGAAAGTGGCCAAGTGGCGACCTTTACTCGCGGTTATTTGCGCTCTTACGCCAGATTGGTTGGTCTT
GATGAAAAAATCATTCTTGATGCGCTAGACAATACTGGTGACGCGCAGCACCAAGAACAGGAGATGCAGAGCTTCTCACG
TAAAACCAATACGGAGAAACACAATAGCCGCATCATGCTGATTACTTGGGGTATTTTTATCATTATTACGGGTATTTCTT
CACTTTGGTGGTGGCAAAATCAGCAAGAGAACAGCTTAGCTCAGTCGGTCAATCAAGCCGCTCAACTTGAGAATGCAGTG
ATTGAAGAGAATGAGCCACCTGTGCTTGACGATGTTGTGATGCAAGAAATGAGTATGGCCGAAGGGGATGCTCAGCCAGA
GATCGCGACAGAAGTGGAGGTTGAGCCTGCTCAGGTTGAGGCAACGGAAAGCACTCCCGTTGAGGAAGCGGTGGAAAGTG
ATGTCCAAGCACAACTGACACCGCCAGTGGCAGAAGAATCACTCCCGTTAGAAGCACCCAAAGCCAATGGTGAAACCGCC
TTAACCATGTCTTTTCGTTCGGACTGCTGGGTTCAAGTTAAAGATGCCAGTGGTAAGACATTGATTTCTGGTATTCGTAA
ATCGGGTCAAGATTTAAACCTCTCTGGTCAGGCCCCTTTTAACGTTATTTTGGGTGCGCCAGAAGGCGTGACCATGACAT
TTGCAAGTGAACCTGTCGACCTTTCTCGGTATACTGCAGGCAAAGTAGCTCGATTCACCTTACCTTTGTAA

Upstream 100 bases:

>100_bases
CCAAAGCACCGCGGCAAACTTTTTCCAAAGTTCAGTGCAAACCAAGAACGATGAATAATAAGCGCACTTAACTTTCATTA
TTTGAAGATTTTAGACAGTT

Downstream 100 bases:

>100_bases
AGATTATGCACAACGAATCTCCAATTATCCGTCGTAAATCGACGCGAATTTATGTGGGCGATGTTCCAATCGGTGATGGT
GCGCCAATCGCGGTGCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTTDNDFSQDSATESLAIEQVGTLLKRQRESMGYTQKQVADRLRLRVNVIEQIDDNQLESGQVATFTRGYLRSYARLVGL
DEKIILDALDNTGDAQHQEQEMQSFSRKTNTEKHNSRIMLITWGIFIIITGISSLWWWQNQQENSLAQSVNQAAQLENAV
IEENEPPVLDDVVMQEMSMAEGDAQPEIATEVEVEPAQVEATESTPVEEAVESDVQAQLTPPVAEESLPLEAPKANGETA
LTMSFRSDCWVQVKDASGKTLISGIRKSGQDLNLSGQAPFNVILGAPEGVTMTFASEPVDLSRYTAGKVARFTLPL

Sequences:

>Translated_316_residues
MTTDNDFSQDSATESLAIEQVGTLLKRQRESMGYTQKQVADRLRLRVNVIEQIDDNQLESGQVATFTRGYLRSYARLVGL
DEKIILDALDNTGDAQHQEQEMQSFSRKTNTEKHNSRIMLITWGIFIIITGISSLWWWQNQQENSLAQSVNQAAQLENAV
IEENEPPVLDDVVMQEMSMAEGDAQPEIATEVEVEPAQVEATESTPVEEAVESDVQAQLTPPVAEESLPLEAPKANGETA
LTMSFRSDCWVQVKDASGKTLISGIRKSGQDLNLSGQAPFNVILGAPEGVTMTFASEPVDLSRYTAGKVARFTLPL
>Mature_315_residues
TTDNDFSQDSATESLAIEQVGTLLKRQRESMGYTQKQVADRLRLRVNVIEQIDDNQLESGQVATFTRGYLRSYARLVGLD
EKIILDALDNTGDAQHQEQEMQSFSRKTNTEKHNSRIMLITWGIFIIITGISSLWWWQNQQENSLAQSVNQAAQLENAVI
EENEPPVLDDVVMQEMSMAEGDAQPEIATEVEVEPAQVEATESTPVEEAVESDVQAQLTPPVAEESLPLEAPKANGETAL
TMSFRSDCWVQVKDASGKTLISGIRKSGQDLNLSGQAPFNVILGAPEGVTMTFASEPVDLSRYTAGKVARFTLPL

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=315, Percent_Identity=31.4285714285714, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 34892; Mature: 34761

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDNDFSQDSATESLAIEQVGTLLKRQRESMGYTQKQVADRLRLRVNVIEQIDDNQLES
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
GQVATFTRGYLRSYARLVGLDEKIILDALDNTGDAQHQEQEMQSFSRKTNTEKHNSRIML
CCCHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCHHHHHHHHHHHHHHCCCHHHCCEEEE
ITWGIFIIITGISSLWWWQNQQENSLAQSVNQAAQLENAVIEENEPPVLDDVVMQEMSMA
EHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EGDAQPEIATEVEVEPAQVEATESTPVEEAVESDVQAQLTPPVAEESLPLEAPKANGETA
CCCCCCCCEEEEECCCCEEECCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEE
LTMSFRSDCWVQVKDASGKTLISGIRKSGQDLNLSGQAPFNVILGAPEGVTMTFASEPVD
EEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCC
LSRYTAGKVARFTLPL
HHHHCCCCEEEEECCC
>Mature Secondary Structure 
TTDNDFSQDSATESLAIEQVGTLLKRQRESMGYTQKQVADRLRLRVNVIEQIDDNQLES
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
GQVATFTRGYLRSYARLVGLDEKIILDALDNTGDAQHQEQEMQSFSRKTNTEKHNSRIML
CCCHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCHHHHHHHHHHHHHHCCCHHHCCEEEE
ITWGIFIIITGISSLWWWQNQQENSLAQSVNQAAQLENAVIEENEPPVLDDVVMQEMSMA
EHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EGDAQPEIATEVEVEPAQVEATESTPVEEAVESDVQAQLTPPVAEESLPLEAPKANGETA
CCCCCCCCEEEEECCCCEEECCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEE
LTMSFRSDCWVQVKDASGKTLISGIRKSGQDLNLSGQAPFNVILGAPEGVTMTFASEPVD
EEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCC
LSRYTAGKVARFTLPL
HHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA